Cytochrome c4 can be involved in the photosynthetic electron transfer system in the purple bacterium Rubrivivax gelatinosus

Biochemistry

Volumn 48, Issue 38, 2009, Pages 9132-9139

  Ohmine, Makito ^a   Matsuura, Katsumi ^a   Shimada, Keizo ^a   Alric, Jean ^b   Verméglio, André ^c   Nagashima, Kenji V P ^a  

^a TOKYO METROPOLITAN UNIVERSITY   (Japan)

^b National de la Recherche Scientifique Université Pierre et Marie Curie   (France)

^c AIX MARSEILLE UNIVERSITY   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; CYTOCHROME C; DELETION MUTANTS; DIHEME CYTOCHROME C; ELECTRON CARRIER; ELECTRON CARRIER PROTEINS; ELECTRON DONATION; ELECTRON DONORS; IN-VITRO; MIDPOINT POTENTIALS; PHOTOSYNTHETIC ELECTRON TRANSFER; PHOTOSYNTHETIC ELECTRON TRANSPORT; PHOTOSYNTHETIC GROWTH; PURPLE BACTERIA; PURPLE PHOTOSYNTHETIC BACTERIA; REACTION CENTER; RUBRIVIVAX GELATINOSUS; TRIPLE MUTANTS;

AMINES; AMINO ACIDS; ELECTRON TRANSITIONS; ORGANIC ACIDS; PHOTOCHEMICAL REACTIONS; PROTEINS;

REACTION RATES;

CARRIER PROTEIN; CYTOCHROME C; CYTOCHROME C4; DNA FRAGMENT; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; CYTOCHROME C(551); HIGH POTENTIAL IRON SULFUR PROTEIN; HIGH POTENTIAL IRON-SULFUR PROTEIN; IRON SULFUR PROTEIN; MULTIENZYME COMPLEX;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL MUTATION; BIOREMEDIATION; DELETION MUTANT; ELECTRON TRANSPORT; GROWTH RATE; IN VITRO STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOOXIDATION; PHOTOSYNTHESIS; PRIORITY JOURNAL; PROTEOBACTERIA; RUBRIVIVAX GELATINOSUS; SEQUENCE HOMOLOGY; BACTERIAL GENE; BETAPROTEOBACTERIA; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; MUTAGENESIS; MUTATION; OLIGONUCLEOTIDE PROBE; PHYSIOLOGY;

BACTERIA (MICROORGANISMS); PHOTOBACTERIA; RUBRIVIVAX GELATINOSUS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; BETAPROTEOBACTERIA; CLONING, MOLECULAR; CYTOCHROME C GROUP; ELECTRON TRANSPORT; ELECTRON TRANSPORT CHAIN COMPLEX PROTEINS; GENES, BACTERIAL; IRON-SULFUR PROTEINS; MOLECULAR SEQUENCE DATA; MUTAGENESIS; MUTATION; OLIGONUCLEOTIDE PROBES; PHOTOSYNTHESIS; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS;

EID: 70349773181     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi901202m     Document Type: Article

References (36)

1. 2 deficient mutants of Rhodobacter sphaeroides. Biochemistry 27, 1918-1925.
2. y, can mediate the photosynthetic growth of Rhodobacter capsulatus and Rhodobacter sphaeroides. EMBO J. 12, 1283-1292.
3. Kimura, Y., Alric, J., Verméglio, A., Masuda, S., Hagiwara, Y., Matsuura, K., Shimada, K., and Nagashima, K. V. P. (2007) A new membrane-bound cytochrome c works as an electron donor to the photosynthetic reaction center complex in the purple bacterium, Rhodovulum sulfidophilum. J. Biol. Chem. 282, 6463-6472. (Pubitemid 47100863)
4. 551 to the primary donor of Rubrivivax gelatinosus reaction center mutationally devoid of the bound cytohrome subunit. Biochim. Biophys. Acta 1321, 93-99.
5. 8 depending on the ambient redox potential. Biochemistry 36, 12183-12188.
6. 8 as alternative electron donors to the reaction center of Chromatium vinosum. Biochemistry 41, 8868-8875.
7. Schoepp, B., Parot, P., Menin, L., Gaillard, J., Richaud, P., and Verméglio, A. (1995) In vivo participation of a high-potential iron-sulfur protein as electron donor to the photochemical reaction center of Rubrivivax gelatinosus. Biochemistry 34, 11736-11742.
8. Hochkoeppler, A., Ciurli, S., Venturoli, G., and Zannoni, D. (1995) The high potential iron-sulfur protein (HiPIP) from Rhodoferax fermentans is competent in photosynthetic electron transfer. FEBS Lett. 357, 70-74.
9. Hochkoeppler, A., Zannoni, D., Ciurli, S., Meyer, T. E., Cusanovich, M. A., and Tollin, G. (1996) Kinetics of photo-induced electron transfer from high-potential iron-sulfur protein to the photosynthetic reaction center of the purple phototroph Rhodoferax fermentans. Proc. Natl. Acad. Sci. U.S.A. 93, 6998-7002.
10. Van Driessche, G., Vandenberghe, I., Devreese, B., Samyn, B., Meyer, T. E., Leigh, R., Cusanovich, M. A., Bartsch, R. G., Fischer, U., and Van Beeumen, J. J. (2003) Amino acid sequences and distribution of high-potential iron-sulfur proteins that donate electrons to the photosynthetic reaction center in phototropic proteobacteria. J. Mol. Evol. 57, 181-199.
11. Nagashima, K. V. P., Matsuura, K., Shimada, K., and Verméglio, A. (2002) High-potential iron-sulfur protein (HiPIP) is the major electron donor to the reaction center complex in photosyntheticaly growing cells of the purple bacterium, Rubrivivax gelatinosus. Biochemistry 41, 14028-14032. (Pubitemid 35364875)
12. Menin, L., Gaillard, J., Parot, P., Schoepp, B., Nitschke, W., and Verméglio, A. (1998) Role of HiPIP as electron donor to the RC-bound cytochrome in photosynthetic purple bacteria. Photosynth. Res. 55, 343-348.
13. 8 in the photosynthetic bacterium Rubrivivax gelatinosus. Biochemistry 38, 15238-15244.
14. Nagashima, K. V. P., Hiraishi, A., Shimada, K., and Matsuura, K. (1997) Horizontal transfer of genes coding for the photosynthetic reaction centers of purple bacteria. J. Mol. Evol. 45, 131-136.
15. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual , Cold Spring Harbor Press, Cold Spring Harbor, NY.
16. Gay, P., LeCoq, D., Steinmetz, M., Berkelman, T., and Kado, C. I. (1985) Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria. J. Bacteriol. 164, 918-921. (Pubitemid 16191873)
17. Nagashima, K. V. P., Shimada, K., and Matsuura, K. (1996) Shortcut of the photosynthetic electron transfer in a mutant lacking the reaction center-bound cytochrome subunit by gene disruption in a purple bacterium, Rubrivivax gelatinosus. FEBS Lett. 385, 209-213.
18. Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
19. Thomas, P. E., Ryan, D., and Levin, W. (1976) An improved staining procedure for the detection of the peroxidase activity of cyocheome P-450 on sodium dodecyl sulfate polyacrylamide gels. Anal. Biochem. 75, 168-176.
20. Dutton, P. L. (1971) Oxidation-reduction potential dependence of the interaction of cytochromes, bacteriochlorophyll and carotenoids at 77°K in chromatophores of Chromatium D and Rhodopseudomonas gelatiosa. Biochim. Biophys. Acta 226, 63-80.
21. Matsuura, K., and Shimada, K. (1986) Cytochromes functionally associated to photochemical reaction centers in Rhodopseudomonas palustris and Rhodopseudomonas acidophila. Biochim. Biophys. Acta 852, 9-18.
22. Igarashi, N., Harada, J., Nagashima, S., Matsuura, K., Shimada, K., and Nagashima, K. V. P. (2001) Horizontal transfer of the photosynthesis gene cluster and operon rearrangement in purple bacteria. J. Mol. Evol. 52, 333-341.
23. Penfold, R. J., and Pemberton, J. M. (1992) An improved suicide vector for construction of chromosomal insertion mutations in bacteria. Gene 118, 145-146.
24. Davison, J., Heusterspreute, M., Chevalier, N., Ha-Thi, V., and Brunel, F. (1987) Vectors with restriction site banks. V. pJRD215, a wide-host-range cosmid vector with multiple cloning sites. Gene 51, 275-280.
25. Osyczka, A., Nagashima, K. V. P., Shimada, K., and Matsuura, K. (1999) Interaction site for high-potential iron-sulfur protein on the tetraheme cytochrome subunit bound to the photosynthetic reaction center of Rubrivivax gelatinosus. Biochemistry 38, 2861-2865. (Pubitemid 29131791)
26. 4 from Pseudomonas stutzeri determined at 2.2 Å resolution. Structure 5, 201-216.
27. 4. Biochim. Biophys. Acta 808, 213-218.
28. 4 from Pseudomonas stutzeri. Eur. J. Biochem. 231, 133-141.
29. 4-cytochrome: a model for complex-induced electron transfer tuning. Structure 11, 547-555.
30. 4 from the purple sulfur photosynthetic bacterium Thiocapsa roseopersicina. Arch. Biochem. Biophys. 467, 174-184.
31. Yang, T. (1985) Biochemical and biophysical properties of cytochrome o of Azotobacter vinelandii. Biochim. Biophys. Acta 848, 342-1251
32. 4 gene from Azotobacter vinelandii: characterization of the mutant strain and a proposed new branch in the respiratory chain. Biochim. Biophys. Acta 1230, 119-129.
33. 2 fixation. J. Bacteriol. 179, 7191-7196.
34. 3-type terminal oxidase in Azotobacter vinelandii. Biochemistry (Moscow) 67, 750-756.
35. y are efficient photosynthetic electron carriers. J. Biol. Chem. 283, 13964-13972.
36. Alric, J., Yoshida, M., Nagashima, K. V. P., Hienerwadel, R., Parot, P., Verméglio, A., Chen, S. W., and Pellequer, J.-L. (2004) Two distinct binding sites for high potential iron-sulfur protein and cytochrome c on the reaction center-bound cytochrome of Rubrivivax gelatinosus. J. Biol. Chem. 279, 32545-32553.