메뉴 건너뛰기




Volumn 5, Issue 2, 2009, Pages 103-113

Urinary peptidomic analysis identifies potential biomarkers for acute rejection of renal transplantation

Author keywords

Acute rejection; Biomarker; Biomarker discovery; LC MALDI; Non invasive biomarkers; Peptidomics; Proteomics; Renal transplantation; Urinary Peptidomics; Urine

Indexed keywords

ALPHA 1 MICROGLOBULIN; BETA 2 MICROGLOBULIN; BIOLOGICAL MARKER; CADHERIN; CARTILAGE INTERMEDIATE LAUER PROTEIN; COLLAGEN TYPE 1; COLLAGEN TYPE 11; COLLAGEN TYPE 18; COLLAGEN TYPE 5; GALACTOSYLTRANSFERASE; KININOGEN; PEPTIDE; POLYPEPTIDE; PROSTAGLANDIN D SYNTHASE; PROTOCADHERIN 1; RECEPTOR PROTEIN; TAMM HORSFALL GLYCOPROTEIN; THYROID RECEPTOR INTERACTING PROTEIN 6; UNCLASSIFIED DRUG; VASCULAR NON INFLAMMATORY MOLECULE 2; ZINC FINGER PROTEIN;

EID: 70349601703     PISSN: 15426416     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12014-009-9029-0     Document Type: Article
Times cited : (18)

References (37)
  • 1
    • 33749252255 scopus 로고    scopus 로고
    • Discovery of urinary biomarkers
    • DOI 10.1074/mcp.R600004-MCP200
    • T Pisitkun R Johnstone MA Knepper 2006 Discovery of urinary biomarkers Mol Cell Proteomics 5 1760 71 16837576 10.1074/mcp.R600004-MCP200 1:CAS:528:DC%2BD28XhtFGqsbbM (Pubitemid 44688186)
    • (2006) Molecular and Cellular Proteomics , vol.5 , Issue.10 , pp. 1760-1771
    • Pisitkun, T.1    Johnstone, R.2    Knepper, M.A.3
  • 3
    • 0026607659 scopus 로고
    • The incidence and impact of early rejection episodes on graft outcome in recipients of first cadaver kidney transplants
    • 1738926 10.1097/00007890-199202010-00013 1:STN:280:DyaK387ltFejuw%3D%3D
    • AC Gulanikar AS MacDonald U Sungurtekin P Belitsky 1992 The incidence and impact of early rejection episodes on graft outcome in recipients of first cadaver kidney transplants Transplantation 53 323 8 1738926 10.1097/00007890- 199202010-00013 1:STN:280:DyaK387ltFejuw%3D%3D
    • (1992) Transplantation , vol.53 , pp. 323-328
    • Gulanikar, A.C.1    MacDonald, A.S.2    Sungurtekin, U.3    Belitsky, P.4
  • 4
    • 0034594881 scopus 로고    scopus 로고
    • Improved graft survival after renal transplantation in the United States, 1988 to 1996
    • DOI 10.1056/NEJM200003023420901
    • S Hariharan CP Johnson BA Bresnahan SE Taranto MJ McIntosh D Stablein 2000 Improved graft survival after renal transplantation in the United States, 1988 to 1996 N Engl J Med 342 605 12 10699159 10.1056/NEJM200003023420901 1:STN:280:DC%2BD3c7ktlSktg%3D%3D (Pubitemid 30118412)
    • (2000) New England Journal of Medicine , vol.342 , Issue.9 , pp. 605-612
    • Hariharan, S.1    Johnson, C.P.2    Bresnahan, B.A.3    Taranto, S.E.4    McIntosh, M.J.5    Stablein, D.6
  • 5
    • 0042467401 scopus 로고    scopus 로고
    • Safety and risk stratification of percutaneous biopsies of adult-sized renal allografts in infant and older pediatric recipients
    • DOI 10.1097/01.TP.0000076097.90123.21
    • J Vidhun J Masciandro L Varich O Salvatierra Jr M Sarwal 2003 Safety and risk stratification of percutaneous biopsies of adult-sized renal allografts in infant and older pediatric recipients Transplantation 76 552 7 12923443 10.1097/01.TP.0000076097.90123.21 (Pubitemid 37013262)
    • (2003) Transplantation , vol.76 , Issue.3 , pp. 552-557
    • Vidhun, J.1    Masciandro, J.2    Varich, L.3    Salvatierra Jr., O.4    Sarwal, M.5
  • 6
    • 39749160938 scopus 로고    scopus 로고
    • Urinary proteomic biomarkers in coronary artery disease
    • 17951555 1:CAS:528:DC%2BD1cXitlyltr4%3D
    • LU Zimmerli E Schiffer P Zurbig, et al. 2008 Urinary proteomic biomarkers in coronary artery disease Mol Cell Proteomics 7 290 8 17951555 1:CAS:528:DC%2BD1cXitlyltr4%3D
    • (2008) Mol Cell Proteomics , vol.7 , pp. 290-298
    • Zimmerli, L.U.1    Schiffer, E.2    Zurbig, P.3
  • 7
    • 45349089587 scopus 로고    scopus 로고
    • Proteomic Evaluation of Urine from Renal Cell Carcinoma Using SELDI-TOF-MS and Tree Analysis Pattern
    • 18473487 1:CAS:528:DC%2BD1cXosFGkt7o%3D
    • DL Wu WH Zhang WJ Wang SB Jing YM Xu 2008 Proteomic Evaluation of Urine from Renal Cell Carcinoma Using SELDI-TOF-MS and Tree Analysis Pattern Technol Cancer Res Treat 7 155 60 18473487 1:CAS:528:DC%2BD1cXosFGkt7o%3D
    • (2008) Technol Cancer Res Treat , vol.7 , pp. 155-160
    • Wu, D.L.1    Zhang, W.H.2    Wang, W.J.3    Jing, S.B.4    Xu, Y.M.5
  • 8
    • 38849191949 scopus 로고    scopus 로고
    • The usefulness of the detection of GSTP1 methylation in urine as a biomarker in the diagnosis of prostate cancer
    • 18076912 10.1016/j.juro.2007.09.073 1:CAS:528:DC%2BD1cXhvVCmtrk%3D discussion 11-2
    • K Woodson KJ O'Reilly JC Hanson D Nelson EL Walk JA Tangrea 2008 The usefulness of the detection of GSTP1 methylation in urine as a biomarker in the diagnosis of prostate cancer J Urol 179 508 11 18076912 10.1016/j.juro.2007.09. 073 1:CAS:528:DC%2BD1cXhvVCmtrk%3D discussion 11-2
    • (2008) J Urol , vol.179 , pp. 508-511
    • Woodson, K.1    O'Reilly, K.J.2    Hanson, J.C.3    Nelson, D.4    Walk, E.L.5    Tangrea, J.A.6
  • 9
    • 0018883439 scopus 로고
    • Urinary fibronectin: Potential as a biomarker in prostatic cancer
    • 7358503 1:CAS:528:DyaL3cXhtVyktLg%3D
    • KS Webb GH Lin 1980 Urinary fibronectin: potential as a biomarker in prostatic cancer Invest Urol 17 401 4 7358503 1:CAS:528:DyaL3cXhtVyktLg%3D
    • (1980) Invest Urol , vol.17 , pp. 401-404
    • Webb, K.S.1    Lin, G.H.2
  • 12
    • 27844532498 scopus 로고    scopus 로고
    • Towards the application of proteomics in renal disease diagnosis
    • DOI 10.1042/CS20050085
    • BC Vidal JV Bonventre S I-HongHsu 2005 Towards the application of proteomics in renal disease diagnosis Clin Sci(Lond) 109 421 30 10.1042/CS20050085 1:CAS:528:DC%2BD2MXhtFCqsLfK (Pubitemid 41640623)
    • (2005) Clinical Science , vol.109 , Issue.5 , pp. 421-430
    • Vidal Jr., B.C.1    Bonventre, J.V.2    I-Hong Hsu, S.3
  • 13
    • 33646025496 scopus 로고    scopus 로고
    • Urinary beta2-microglobulin is associated with acute renal allograft rejection
    • 16632030 10.1053/j.ajkd.2006.01.034 1:CAS:528:DC%2BD28XlsVCgsb8%3D
    • WS Oetting TB Rogers TP Krick AJ Matas HN Ibrahim 2006 Urinary beta2-microglobulin is associated with acute renal allograft rejection Am J Kidney Dis 47 898 904 16632030 10.1053/j.ajkd.2006.01.034 1:CAS:528: DC%2BD28XlsVCgsb8%3D
    • (2006) Am J Kidney Dis , vol.47 , pp. 898-904
    • Oetting, W.S.1    Rogers, T.B.2    Krick, T.P.3    Matas, A.J.4    Ibrahim, H.N.5
  • 15
  • 18
    • 55049108997 scopus 로고    scopus 로고
    • Urine in clinical proteomics
    • 18667409 10.1074/mcp.R800001-MCP200 1:CAS:528:DC%2BD1cXht1Ols7%2FL
    • S Decramer A Gonzalezdeperedo B Breuil, et al. 2008 Urine in clinical proteomics Mol Cell Proteomics 7 10 1850 62 18667409 10.1074/mcp.R800001-MCP200 1:CAS:528:DC%2BD1cXht1Ols7%2FL
    • (2008) Mol Cell Proteomics , vol.7 , Issue.10 , pp. 1850-1862
    • Decramer, S.1    Gonzalezdeperedo, A.2    Breuil, B.3
  • 20
    • 33947396353 scopus 로고    scopus 로고
    • Standardized peptidome profiling of human urine by magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • DOI 10.1373/clinchem.2006.077834
    • GM Fiedler S Baumann A Leichtle, et al. 2007 Standardized peptidome profiling of human urine by magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry Clin Chem 53 421 8 17272489 10.1373/clinchem.2006.077834 1:CAS:528:DC%2BD2sXis1Wnsrg%3D (Pubitemid 46447938)
    • (2007) Clinical Chemistry , vol.53 , Issue.3 , pp. 421-428
    • Fiedler, G.M.1    Baumann, S.2    Leichtle, A.3    Oltmann, A.4    Kase, J.5    Thiery, J.6    Ceglarek, U.7
  • 21
    • 0023179130 scopus 로고
    • The use of plasma creatinine concentration for estimating glomerular filtration rate in infants, children, and adolescents
    • 3588043 1:STN:280:DyaL2s3jtVGrsg%3D%3D
    • GJ Schwartz LP Brion A Spitzer 1987 The use of plasma creatinine concentration for estimating glomerular filtration rate in infants, children, and adolescents Pediatr Clin North Am 34 571 90 3588043 1:STN:280: DyaL2s3jtVGrsg%3D%3D
    • (1987) Pediatr Clin North Am , vol.34 , pp. 571-590
    • Schwartz, G.J.1    Brion, L.P.2    Spitzer, A.3
  • 22
    • 52649094889 scopus 로고    scopus 로고
    • Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation
    • 18459997
    • TK Sigdel K Lau J Schilling M Sarwal 2008 Optimizing protein recovery for urinary proteomics, a tool to monitor renal transplantation Clin Transplant 22 617 23 18459997
    • (2008) Clin Transplant , vol.22 , pp. 617-623
    • Sigdel, T.K.1    Lau, K.2    Schilling, J.3    Sarwal, M.4
  • 23
    • 0016636179 scopus 로고
    • An improved 2, 4, 6-trinitrobenzenesulfonic acid method for the determination of amines
    • 1137089 10.1016/0003-2697(75)90431-5 1:CAS:528:DyaE2MXhsFWlsbc%3D
    • SL Snyder PZ Sobocinski 1975 An improved 2, 4, 6-trinitrobenzenesulfonic acid method for the determination of amines Analytical Biochemistry 64 284 8 1137089 10.1016/0003-2697(75)90431-5 1:CAS:528:DyaE2MXhsFWlsbc%3D
    • (1975) Analytical Biochemistry , vol.64 , pp. 284-288
    • Snyder, S.L.1    Sobocinski, P.Z.2
  • 24
    • 10244279272 scopus 로고    scopus 로고
    • Sample classification from protein mass spectrometry, by 'peak probability contrasts'
    • DOI 10.1093/bioinformatics/bth357
    • R Tibshirani T Hastie B Narasimhan, et al. 2004 Sample classification from protein mass spectrometry, by 'peak probability contrasts' Bioinformatics 20 3034 44 15226172 10.1093/bioinformatics/bth357 1:CAS:528:DC%2BD2cXhtVSrur%2FE (Pubitemid 39619195)
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3034-3044
    • Tibshirani, R.1    Hastie, T.2    Narasimhan, B.3    Soltys, S.4    Shi, G.5    Koong, A.6    Le, Q.-T.7
  • 25
    • 0142008803 scopus 로고    scopus 로고
    • A data-analytic strategy for protein biomarker discovery: profiling of high-dimensional proteomic data for cancer detection
    • DOI 10.1093/biostatistics/4.3.449
    • Y Yasui M Pepe ML Thompson, et al. 2003 A data-analytic strategy for protein biomarker discovery: profiling of high-dimensional proteomic data for cancer detection Biostatistics 4 449 63 12925511 10.1093/biostatistics/4.3.449 (Pubitemid 36810096)
    • (2003) BIOSTATISTICS -OXFORD , vol.4 , Issue.3 , pp. 449-464
    • Yasui, Y.1    Pepe, M.2    Thompson, M.L.3
  • 26
    • 0013889689 scopus 로고
    • Determination of free amino groups in proteins by trinitrobenzenesulfonic acid
    • 4161471 10.1016/0003-2697(66)90275-2 1:CAS:528:DyaF28XmvFKitg%3D%3D
    • AF Habeeb 1966 Determination of free amino groups in proteins by trinitrobenzenesulfonic acid Anal Biochem 14 328 36 4161471 10.1016/0003- 2697(66)90275-2 1:CAS:528:DyaF28XmvFKitg%3D%3D
    • (1966) Anal Biochem , vol.14 , pp. 328-336
    • Habeeb, A.F.1
  • 27
    • 33750364830 scopus 로고    scopus 로고
    • The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins
    • DOI 10.1186/gb-2006-7-9-r80
    • J Adachi C Kumar Y Zhang JV Olsen M Mann 2006 The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins Genome Biol 7 R80 16948836 10.1186/gb-2006-7-9-r80 (Pubitemid 44614864)
    • (2006) Genome Biology , vol.7 , Issue.9
    • Adachi, J.1    Kumar, C.2    Zhang, Y.3    Olsen, J.V.4    Mann, M.5
  • 28
    • 44649132121 scopus 로고    scopus 로고
    • Capillary electrophoresis-electrospray-mass spectrometry in peptide analysis and peptidomics
    • DOI 10.1002/elps.200700404
    • M Herrero E Ibanez A Cifuentes 2008 Capillary electrophoresis- electrospray-mass spectrometry in peptide analysis and peptidomics Electrophoresis 29 10 2148 60 18409159 10.1002/elps.200700404 1:CAS:528:DC%2BD1cXnslWmsbs%3D (Pubitemid 351781211)
    • (2008) Electrophoresis , vol.29 , Issue.10 , pp. 2148-2160
    • Herrero, M.1    Ibanez, E.2    Cifuentes, A.3
  • 30
    • 39649099550 scopus 로고    scopus 로고
    • Comparative RP-HPLC for rapid identification of glycopeptides and application in off-line LC-MALDI-MS analysis
    • 18179786 10.1016/j.carres.2007.12.008 1:CAS:528:DC%2BD1cXis1Cgtbg%3D
    • Y Kanie A Enomoto S Goto O Kanie 2008 Comparative RP-HPLC for rapid identification of glycopeptides and application in off-line LC-MALDI-MS analysis Carbohydr Res 343 758 68 18179786 10.1016/j.carres.2007.12.008 1:CAS:528:DC%2BD1cXis1Cgtbg%3D
    • (2008) Carbohydr Res , vol.343 , pp. 758-768
    • Kanie, Y.1    Enomoto, A.2    Goto, S.3    Kanie, O.4
  • 31
    • 38549137803 scopus 로고    scopus 로고
    • LC MALDI-TOF MS/MS and LC ESI FTMS analyses of HLA-B27 associated peptides isolated from peripheral blood cells
    • 18160138 1:CAS:528:DC%2BD1cXhtl2isrY%3D
    • E Stodulkova P Novak SO Deininger, et al. 2008 LC MALDI-TOF MS/MS and LC ESI FTMS analyses of HLA-B27 associated peptides isolated from peripheral blood cells Immunol Lett 116 79 85 18160138 1:CAS:528:DC%2BD1cXhtl2isrY%3D
    • (2008) Immunol Lett , vol.116 , pp. 79-85
    • Stodulkova, E.1    Novak, P.2    Deininger, S.O.3
  • 32
    • 44949145171 scopus 로고    scopus 로고
    • Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling
    • DOI 10.1186/1477-5956-6-16
    • ST Sadiq D Agranoff 2008 Pooling serum samples may lead to loss of potential biomarkers in SELDI-ToF MS proteomic profiling Proteome Sci 6 16 18513446 10.1186/1477-5956-6-16 (Pubitemid 351803893)
    • (2008) Proteome Science , vol.6 , pp. 16
    • Sadiq, S.T.1    Agranoff, D.2
  • 33
    • 33750131662 scopus 로고    scopus 로고
    • Simple urinary sample preparation for proteomic analysis
    • DOI 10.1021/pr060305y
    • A Khan NH Packer 2006 Simple urinary sample preparation for proteomic analysis J Proteome Res 5 2824 38 17022654 10.1021/pr060305y 1:CAS:528:DC%2BD28XptFaht70%3D (Pubitemid 44595183)
    • (2006) Journal of Proteome Research , vol.5 , Issue.10 , pp. 2824-2838
    • Khan, A.1    Packer, N.H.2
  • 34
    • 33646161950 scopus 로고    scopus 로고
    • Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery
    • 16501490 1:CAS:528:DC%2BD28XjsVWrs7k%3D
    • H Zhou PS Yuen T Pisitkun, et al. 2006 Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery Kidney Int 69 1471 6 16501490 1:CAS:528:DC%2BD28XjsVWrs7k%3D
    • (2006) Kidney Int , vol.69 , pp. 1471-1476
    • Zhou, H.1    Yuen, P.S.2    Pisitkun, T.3
  • 35
    • 16244419727 scopus 로고    scopus 로고
    • Proteomic-based identification of cleaved urinary β 2-microglobulin as a potential marker for acute tubular injury in renal allografts
    • DOI 10.1111/j.1600-6143.2005.00766.x
    • S Schaub JA Wilkins M Antonovici, et al. 2005 Proteomic-based identification of cleaved urinary beta2-microglobulin as a potential marker for acute tubular injury in renal allografts Am J Transplant 5 729 38 15760396 10.1111/j.1600-6143.2005.00766.x 1:CAS:528:DC%2BD2MXjtlaitr0%3D (Pubitemid 40461282)
    • (2005) American Journal of Transplantation , vol.5 , Issue.4 , pp. 729-738
    • Schaub, S.1    Wilkins, J.A.2    Antonovici, M.3    Krokhin, O.4    Weiler, T.5    Rush, D.6    Nickerson, P.7
  • 36
    • 0031762496 scopus 로고    scopus 로고
    • Detection of transient ST segment episodes during ambulatory ECG monitoring
    • DOI 10.1006/cbmr.1998.1483
    • CP Vio V Olavarria C Gonzalez L Nazal M Cordova C Balestrini 1998 Cellular and functional aspects of the renal kallikrein system in health and disease Biol Res 31 305 22 9830518 10.1006/cbmr.1998.1483 1:STN:280: DyaK1M%2FkvVaisg%3D%3D (Pubitemid 28512511)
    • (1998) Computers and Biomedical Research , vol.31 , Issue.5 , pp. 305-322
    • Jager, F.1    Moody, G.B.2    Mark, R.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.