-
2
-
-
0034915764
-
Mechanisms underlying ubiquitination
-
Pickart CM (2001) Mechanisms underlying ubiquitination. Annu Rev Biochem 70:503-533.
-
(2001)
Annu Rev Biochem
, vol.70
, pp. 503-533
-
-
Pickart, C.M.1
-
3
-
-
11844263929
-
A series of ubiquitin binding factors connects CDC48/p97 to substrate multiubiquitylation and proteasomal targeting
-
DOI 10.1016/j.cell.2004.11.013, PII S0092867404010864
-
Richly H, et al. (2005) A series of ubiquitin binding factors connects CDC48/p97 to substrate multiubiquitylation and proteasomal targeting. Cell 120:73-84. (Pubitemid 40094604)
-
(2005)
Cell
, vol.120
, Issue.1
, pp. 73-84
-
-
Richly, H.1
Rape, M.2
Braun, S.3
Rumpf, S.4
Hoege, C.5
Jentsch, S.6
-
4
-
-
0023003380
-
In vivo half-life of a protein is a function of its amino-terminal residue
-
Bachmair A, Finley D, Varshavsky A (1986) In vivo half-life of a protein is a function of its amino-terminal residue. Science 234:179-186. (Pubitemid 17186094)
-
(1986)
Science
, vol.234
, Issue.4773
, pp. 179-186
-
-
Bachmair, A.1
Finley, D.2
Varshavsky, A.3
-
5
-
-
0029119522
-
A proteolytic pathway that recognizes ubiquitin as a degradation signal
-
Johnson ES, Ma PC, Ota IM, Varshavsky A (1995) A proteolytic pathway that recognizes ubiquitin as a degradation signal. J Biol Chem 270:17442-17456.
-
(1995)
J Biol Chem
, vol.270
, pp. 17442-17456
-
-
Johnson, E.S.1
Ma, P.C.2
Ota, I.M.3
Varshavsky, A.4
-
6
-
-
0038487228
-
Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: Dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains
-
DOI 10.1083/jcb.200302169
-
Ye Y, Meyer HH, Rapoport TA (2003) Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: Dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains. J Cell Biol 162:71-84. (Pubitemid 36859536)
-
(2003)
Journal of Cell Biology
, vol.162
, Issue.1
, pp. 71-84
-
-
Ye, Y.1
Meyer, H.H.2
Rapoport, T.A.3
-
7
-
-
0033525589
-
A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly
-
Koegl M, et al. (1999) A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly. Cell 96:635-644. (Pubitemid 29122806)
-
(1999)
Cell
, vol.96
, Issue.5
, pp. 635-644
-
-
Koegl, M.1
Hoppe, T.2
Schlenker, S.3
Ulrich, H.D.4
Mayer, T.U.5
Jentsch, S.6
-
8
-
-
35649014889
-
Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p
-
DOI 10.1073/pnas.0701369104
-
Tu D, Li W, Ye Y, Brunger AT (2007) Inaugural article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p. Proc Natl Acad Sci USA 104:15599-15606. (Pubitemid 350035351)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.40
, pp. 15599-15606
-
-
Tu, D.1
Li, W.2
Ye, Y.3
Brunger, A.T.4
-
10
-
-
0035853037
-
RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: A negative feedback circuit
-
DOI 10.1073/pnas.071022298
-
Xie Y, Varshavsky A (2001) RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: A negative feedback circuit. Proc Natl Acad Sci USA 98:3056-3061. (Pubitemid 32220798)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.6
, pp. 3056-3061
-
-
Xie, Y.1
Varshavsky, A.2
-
11
-
-
33744817103
-
The AAA ATPase p97 links peptide N-glycanase to the endoplasmic reticulum-associated E3 ligase autocrine motility factor receptor
-
DOI 10.1073/pnas.0602747103
-
Li G, Zhao G, Zhou X, Schindelin H, Lennarz WJ (2006) The AAA ATPase p97 links peptide N-glycanase to the endoplasmic reticulum-associated E3 ligase autocrine motility factor receptor. Proc Natl Acad Sci USA 103:8348-8353. (Pubitemid 43838458)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.22
, pp. 8348-8353
-
-
Li, G.1
Zhao, G.2
Zhou, X.3
Schindelin, H.4
Lennarz, W.J.5
-
12
-
-
33845939821
-
Cdc48 (p97): A "molecular gearbox" in the ubiquitin pathway?
-
Jentsch S, Rumpf S (2007) Cdc48 (p97): A "molecular gearbox" in the ubiquitin pathway? Trends Biochem Sci 32:6-11.
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 6-11
-
-
Jentsch, S.1
Rumpf, S.2
-
13
-
-
34547097772
-
Detailed structural insights into the p97-Npl4-Ufd1 interface
-
Isaacson RL, et al. (2007) Detailed structural insights into the p97-Npl4-Ufd1 interface. J Biol Chem 282:21361-21369.
-
(2007)
J Biol Chem
, vol.282
, pp. 21361-21369
-
-
Isaacson, R.L.1
-
14
-
-
30744451400
-
Functional division of substrate processing cofactors of the ubiquitin-selective Cdc48 chaperone
-
DOI 10.1016/j.molcel.2005.12.014, PII S1097276505018976
-
Rumpf S, Jentsch S (2006) Functional division of substrate processing cofactors of the ubiquitin-selective Cdc48 chaperone. Mol Cell 21:261-269. (Pubitemid 43099941)
-
(2006)
Molecular Cell
, vol.21
, Issue.2
, pp. 261-269
-
-
Rumpf, S.1
Jentsch, S.2
-
15
-
-
34547419767
-
Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation
-
DOI 10.1073/pnas.0702966104
-
Zhao G, et al. (2007) Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation. Proc Natl Acad Sci USA 104:8785-8790. (Pubitemid 47175389)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.21
, pp. 8785-8790
-
-
Zhao, G.1
Zhou, X.2
Wang, L.3
Li, G.4
Schindelin, H.5
Lennarz, W.J.6
-
16
-
-
33646873985
-
Role of Doa1 in the Saccharomyces cerevisiae DNA damage response
-
DOI 10.1128/MCB.01640-05
-
Lis ET, Romesberg FE (2006) Role of Doa1 in the Saccharomyces cerevisiae DNA damage response. Mol Cell Biol 26:4122-4133. (Pubitemid 43788015)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.11
, pp. 4122-4133
-
-
Lis, E.T.1
Romesberg, F.E.2
-
17
-
-
52049085050
-
DOA1/UFD3 plays a role in sorting ubiquitinated membrane proteins into multivesicular bodies
-
Ren J, Pashkova N, Winistorfer S, Piper RC (2008) DOA1/UFD3 plays a role in sorting ubiquitinated membrane proteins into multivesicular bodies. J Biol Chem 283:21599-21611.
-
(2008)
J Biol Chem
, vol.283
, pp. 21599-21611
-
-
Ren, J.1
Pashkova, N.2
Winistorfer, S.3
Piper, R.C.4
-
18
-
-
0028076764
-
The ancient regulatory-protein family of WD-repeat proteins
-
DOI 10.1038/371297a0
-
Neer EJ, Schmidt CJ, Nambudripad R, Smith TF (1994) The ancient regulatory-protein family of WD-repeat proteins. Nature 371:297-300. (Pubitemid 24300613)
-
(1994)
Nature
, vol.371
, Issue.6495
, pp. 297-300
-
-
Neer, E.J.1
Schmidt, C.J.2
Nambudripad, R.3
Smith, T.F.4
-
19
-
-
31344473702
-
Doa1 is a Cdc48 adapter that possesses a novel ubiquitin binding domain
-
DOI 10.1128/MCB.26.3.822-830.2006
-
Mullally JE, Chernova T, Wilkinson KD (2006) Doa1 is a Cdc48 adapter that possesses a novel ubiquitin binding domain. Mol Cell Biol 26:822-830. (Pubitemid 43146478)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.3
, pp. 822-830
-
-
Mullally, J.E.1
Chernova, T.2
Wilkinson, K.D.3
-
20
-
-
34547592557
-
MolProbity: All-atom contacts and structure validation for proteins and nucleic acids
-
Davis IW, et al. (2007) MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res 35:W375-383.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Davis, I.W.1
-
21
-
-
0031754774
-
The armadillo family of structural proteins
-
Hatzfeld M (1999) The armadillo family of structural proteins. Int Rev Cytol 186:179-224.
-
(1999)
Int Rev Cytol
, vol.186
, pp. 179-224
-
-
Hatzfeld, M.1
-
22
-
-
0028266975
-
A repeating amino acid motif shared by proteins with diverse cellular roles
-
DOI 10.1016/0092-8674(94)90353-0
-
Peifer M, Berg S, Reynolds AB (1994) A repeating amino acid motif shared by proteins with diverse cellular roles. Cell 76:789-791. (Pubitemid 24085316)
-
(1994)
Cell
, vol.76
, Issue.5
, pp. 789-791
-
-
Peifer, M.1
Berg, S.2
Reynolds, A.B.3
-
23
-
-
56649103902
-
Searching protein structure databases with DaliLite v.3
-
DOI 10.1093/bioinformatics/btn507
-
Holm L, Kaariainen S, Rosenstrom P, Schenkel A (2008) Searching protein structure databases with DaliLite v. 3. Bioinformatics 24:2780-2781. (Pubitemid 352722625)
-
(2008)
Bioinformatics
, vol.24
, Issue.23
, pp. 2780-2781
-
-
Holm, L.1
Kaariainen, S.2
Rosenstrom, P.3
Schenkel, A.4
-
24
-
-
0032078933
-
Importins and exportins: How to get in and out of the nucleus
-
DOI 10.1016/S0968-0004(98)01204-3
-
Weis K (1998) Importins and exportins: How to get in and out of the nucleus. Trends Biochem Sci 23:185-189. (Pubitemid 28261037)
-
(1998)
Trends in Biochemical Sciences
, vol.23
, Issue.5
, pp. 185-189
-
-
Weis, K.1
-
25
-
-
4544249199
-
Structure and biochemical function of a prototypical Arabidopsis U-box domain
-
DOI 10.1074/jbc.M405057200
-
Andersen P, et al. (2004) Structure and biochemical function of a prototypical Arabidopsis U-box domain. J Biol Chem 279:40053-40061. (Pubitemid 39258280)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.38
, pp. 40053-40061
-
-
Andersen, P.1
Kragelund, B.B.2
Olsen, A.N.3
Larsen, F.H.4
Chua, N.-H.5
Poulsen, F.M.6
Skriver, K.7
-
26
-
-
51249108640
-
Ubxd1 is a novel co-factor of the human p97 ATPase
-
Madsen L, et al. (2008) Ubxd1 is a novel co-factor of the human p97 ATPase. Int J Biochem Cell Biol 40:2927-2942.
-
(2008)
Int J Biochem Cell Biol
, vol.40
, pp. 2927-2942
-
-
Madsen, L.1
-
27
-
-
0032563246
-
Crystallographic analysis of the recognition of a nuclear localization signal by the nuclear import factor karyopherin alpha
-
DOI 10.1016/S0092-8674(00)81419-1
-
Conti E, Uy M, Leighton L, Blobel G, Kuriyan J (1998) Crystallographic analysis of the recognition of a nuclear localization signal by the nuclear import factor karyopherin alpha. Cell 94:193-204. (Pubitemid 28348007)
-
(1998)
Cell
, vol.94
, Issue.2
, pp. 193-204
-
-
Conti, E.1
Uy, M.2
Leighton, L.3
Blobel, G.4
Kuriyan, J.5
-
28
-
-
37249005205
-
The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability
-
DOI 10.1038/nprot.2007.321, PII NPROT.2007.321
-
Niesen FH, Berglund H, Vedadi M (2007) The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability. Nat Protoc 2:2212-2221. (Pubitemid 351565860)
-
(2007)
Nature Protocols
, vol.2
, Issue.9
, pp. 2212-2221
-
-
Niesen, F.H.1
Berglund, H.2
Vedadi, M.3
-
29
-
-
0036753063
-
Multiple associated proteins regulate proteasome structure and function
-
Leggett DS, et al. (2002) Multiple associated proteins regulate proteasome structure and function. Mol Cell 10:495-507.
-
(2002)
Mol Cell
, vol.10
, pp. 495-507
-
-
Leggett, D.S.1
-
30
-
-
0025924738
-
Cloning of a phospholipase A2-activating protein
-
Clark MA, et al. (1991) Cloning of a phospholipase A2-activating protein. Proc Natl Acad Sci USA 88:5418-5422.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 5418-5422
-
-
Clark, M.A.1
-
31
-
-
0032950628
-
Autoinhibition by an internal nuclear localization signal revealed by the crystal structure of mammalian importin alpha
-
DOI 10.1038/7625
-
Kobe B (1999) Autoinhibition by an internal nuclear localization signal revealed by the crystal structure of mammalian importin alpha. Nat Struct Biol 6:388-397. (Pubitemid 29166489)
-
(1999)
Nature Structural Biology
, vol.6
, Issue.4
, pp. 388-397
-
-
Kobe, B.1
-
32
-
-
33750493628
-
Molecular basis for control of conjugation by bacterial pheromone and inhibitor peptides
-
Kozlowicz BK, et al. (2006) Molecular basis for control of conjugation by bacterial pheromone and inhibitor peptides. Mol Microbiol 62:958-969.
-
(2006)
Mol Microbiol
, vol.62
, pp. 958-969
-
-
Kozlowicz, B.K.1
-
38
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
DOI 10.1073/pnas.181342398
-
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA (2001) Electrostatics of nanosystems: Application to microtubules and the ribosome. Proc Natl Acad Sci USA 98:10037-10041. (Pubitemid 32802969)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.18
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
|