Ectomycorrhizal fungi and their enzymes in soils: Is there enough evidence for their role as facultative soil saprotrophs?

Oecologia

Volumn 161, Issue 4, 2009, Pages 657-660

  Baldrian, Petr ^a  

^a INSTITUTE OF MICROBIOLOGY   (Czech Republic)

Author keywords

Cellulose; Ectomycorrhizal fungi; Lignin; Saprotrophy; Soil organic matter

Indexed keywords

CARBON; LIGNIN; ORGANIC COMPOUND;

CELLULOSE; ENZYME ACTIVITY; FUNGUS; GENE EXPRESSION; GENOME; HOST PLANT; RELATIVE ABUNDANCE; SAPROTROPHY; SOIL ANALYSIS; SOIL CARBON; SPECIES DIVERSITY; STARVATION;

AMANITA; ARTICLE; BASIDIOMYCETES; CHEMISTRY; CLASSIFICATION; ENZYMOLOGY; FUNGAL GENOME; GENETICS; GROWTH, DEVELOPMENT AND AGING; LACCARIA; METABOLISM; MICROBIOLOGY; MYCORRHIZA; PLANT ROOT; SOIL; STARVATION;

AMANITA; BASIDIOMYCOTA; CARBON; GENOME, FUNGAL; LACCARIA; LIGNIN; MYCORRHIZAE; ORGANIC CHEMICALS; PLANT ROOTS; SOIL; SOIL MICROBIOLOGY; STARVATION;

AMANITA; AMANITA PHALLOIDES; BASIDIOMYCOTA; FUNGI; GALERINA MARGINATA; LACCARIA; LACCARIA BICOLOR;

EID: 70349489990     PISSN: 00298549     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00442-009-1433-7     Document Type: Article

References (33)

1. Baldrian P (2004) Increase of laccase activity during interspecific interactions of white-rot fungi. FEMS Microbiol Ecol 50:245-253
2. Baldrian P (2006) Fungal laccases-occurrence and properties. FEMS Microbiol Rev 30:215-242
3. Baldrian P (2008a) Enzymes of saprotrophic basidiomycetes. In: Boddy L, Frankland JC, van West P (eds) Ecology of saprotrophic basidiomycetes. Academic Press, Amsterdam, pp 19-41
4. Baldrian P (2008b) Wood-inhabiting ligninolytic basidiomycetes in soils: ecology and constraints for applicability in bioremediation. Fungal Ecol 1:4-12
5. Baldrian P, Valášková V (2008) Degradation of cellulose by basidiomycetous fungi. FEMS Microbiol Rev 32:501-521
6. Buee M, Vairelles D, Garbaye J (2005) Year-round monitoring of diversity and potential metabolic activity of the ectomycorrhizal community in a beech (Fagus silvatica) forest subjected to two thinning regimes. Mycorrhiza 15:235-245
7. Cairney JWG, Taylor AFS, Burke RM (2003) No evidence for lignin peroxidase genes in ectomycorrhizal fungi. New Phytol 160:461-462
8. Chambers SM, Burke RM, Brooks PR, Cairney JWG (1999) Molecular and biochemical evidence for manganese-dependent peroxidase activity in Tylospora fibrillosa. Mycol Res 103:1098-1102
9. Courty P-E, Bréda N, Garbaye J (2007) Relation between oak tree phenology and the secretion of organic matter degrading enzymes by Lactarius quietus ectomycorrhizas before and during bud break. Soil Biol Biochem 39:1655-1663
10. Criquet S, Farnet AM, Tagger S, Le Petit J (2000) Annual variations of phenoloxidase activities in an evergreen oak litter: influence of certain biotic and abiotic factors. Soil Biol Biochem 32:1505-1513
11. Cullings K, Ishkhanova G, Henson J (2008) Defoliation effects on enzyme activities of the ectomycorrhizal fungus Suillus granulatus in a Pinus contorta (lodgepole pine) stand in Yellowstone National Park. Oecologia 158:77-83
12. Durall DM, Todd AW, Trappe JM (1994) Decomposition of C-14-labeled substrates by ectomycorrhizal fungi in association with Douglas fir. New Phytol 127:725-729
13. Hatakka A (2001) Biodegradation of lignin. In: Hofrichter M, Steinbüchel A (eds) Lignin, humic substances and coal, vol 1. Wiley-VCH, Weinheim, pp 129-179
14. Hofrichter M (2002) Review: lignin conversion by manganese peroxidase (MnP). Enzyme Microb Technol 30:454-466
15. Krause K, Kothe E (2006) Use of RNA fingerprinting to identify fungal genes specifically expressed during ectomycorrhizal interaction. J Basic Microbiol 46:387-399
16. Lindahl BD, Ihrmark K, Boberg J, Trumbore SE, Hogberg P, Stenlid J, Finlay RD (2007) Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. New Phytol 173:611-620
17. Luis P, Kellner H, Zimdars B, Langer U, Martin F, Buscot F (2005) Patchiness and spatial distribution of laccase genes of ectomycorrhizal, saprotrophic, and unknown basidiomycetes in the upper horizons of a mixed forest cambisol. Microb Ecol 50:570-579
18. Martin F, Selosse MA (2008) The Laccaria genome: a symbiont blueprint decoded. New Phytol 180:296-310
19. Morgenstern I, Klopman S, Hibbett D (2008) Molecular evolution and diversity of lignin degrading heme peroxidases in the Agaricomycetes. J Mol Evol 66:243-257
20. Mosca E, Montecchio L, Scattolin L, Garbaye J (2007) Enzymatic activities of three ectomycorrhizal types of Quercus robur L. in relation to tree decline and thinning. Soil Biol Biochem 39:2897-2904
21. Nagendran S, Hallen-Adams HE, Paper JM, Aslam N, Walton JD (2009) Reduced genomic potential for secreted plant cell-wall-degrading enzymes in the ectomycorrhizal fungus Amanita bisporigera, based on the secretome of Trichoderma reesei. Fungal Genet Biol 46:427-435
22. Norkrans B (1950) Studies in growth and cellulolytic enzymes of Tricholoma. Symbolae Bot Upsalienses 11:1-126
23. O'Brien HE, Parrent JL, Jackson JA, Moncalvo JM, Vilgalys R (2005) Fungal community analysis by large-scale sequencing of environmental samples. Appl Environ Microbiol 71:5544-5550
24. Osono T, Takeda H (2005) Decomposition of organic chemical components in relation to nitrogen dynamics in leaf litter of 14 tree species in a cool temperate forest. Ecol Res 20:41-49
25. Šnajdr J, Valášková V, Merhautová V, Cajthaml T, Baldrian P (2008a) Activity and spatial distribution of lignocellulose-degrading enzymes during forest soil colonization by saprotrophic basidiomycetes. Enzyme Microb Technol 43:186-192
26. Šnajdr J, Valášková V, Merhautová V, Herinková J, Cajthaml T, Baldrian P (2008b) Spatial variability of enzyme activities and microbial biomass in the upper layers of Quercus petraea forest soil. Soil Biol Biochem 40:2068-2075
27. Talbot JM, Allison SD, Treseder KK (2008) Decomposers in disguise: mycorrhizal fungi as regulators of soil C dynamics in ecosystems under global change. Funct Ecol 22:955-963
28. Tanesaka E, Masuda H, Kinugawa K (1993) Wood degrading ability of basidiomycetes that are wood decomposers, litter decomposers, or mycorrhizal symbionts. Mycologia 85:347-354
29. Treseder KK, Torn MS, Masiello CA (2006) An ecosystem-scale radiocarbon tracer to test use of litter carbon by ectomycorrhizal fungi. Soil Biol Biochem 38:1077-1082
30. Trojanowski J, Haider K, Huttermann A (1984) Decomposition of C-14-labeled lignin, holocellulose and lignocellulose by mycorrhizal fungi. Arch Microbiol 139:202-206
31. Valášková V, Šnajdr J, Bittner B, Cajthaml T, Merhautová V, Hofrichter M, Baldrian P (2007) Production of lignocellulose-degrading enzymes and degradation of leaf litter by saprotrophic basidiomycetes isolated from a Quercus petraea forest. Soil Biol Biochem 39:2651-2660
32. Valášková V, de Boer W, Klein Gunnewiek PJA, Pospíšek M, Baldrian P (2009) Phylogenetic composition and properties of bacteria coexisting with the fungus Hypholoma fasciculare in decaying wood. ISME J. doi: 10.1038/ismej.2009.64
33. Wittmann C, Kahkonen MA, Ilvesniemi H, Kurola J, Salkinoja-Salonen MS (2004) Areal activities and stratification of hydrolytic enzymes involved in the biochemical cycles of carbon, nitrogen, sulphur and phosphorus in podsolized boreal forest soils. Soil Biol Biochem 36:425-433