Subtyping of type A influenza by sequencing the variable regions of HA gene specifically amplified with RT-PCR

Chinese Science Bulletin

Volumn 54, Issue 13, 2009, Pages 2164-2167

  Yan, An ^a   Ding, GuoHui ^b   Zhou, ZhenFeng ^a   Dong, Hui ^a   Zhang, YaKun ^a   Zhu, Lei ^c   He, YunGang ^c   Zhang, GuoQing ^d   Li, YiXue ^b,d   Sun, Bing ^b   Huang, Zhong ^b   Lan, Ke ^b   Jin, Li ^a,b,e   Wang, HongYan ^e   Wang, XiaoNing ^e,f   Yang, Zhong ^d,e   Zhong, Yang ^d,e   Dai, JianXin ^g,h   Guo, YaJun ^g,h   Wang, Hao ^g,h   Che, XiaoYan ⁱ   Wu, Fan ^j   Yuan, ZhenGan ^j   Zhang, Xi ^j   Cao, ZhiWei ^d,k   Zhou, XiaoNong ^l   Zhou, JiaHai ^m   Ma, ZhiYong ⁿ   Tong, GuangZhi ⁿ   Zhao, GuoPing ^a,b,c,e   Jin, WeiRong ^c   Xiong, Hui ^a   more..

^a CHINESE NATIONAL HUMAN GENOME CENTER AT SHANGHAI   (China)

^b Chinese Academy of Sciences   (China)

^c Shanghai Biochip Co Ltd   (China)

^d SHANGHAI CENTER FOR BIOINFORMATION TECHNOLOGY   (China)

^e FUDAN UNIVERSITY   (China)

^f SOUTH CHINA UNIVERSITY OF TECHNOLOGY   (China)

^g SECOND MILITARY MEDICAL UNIVERSITY   (China)

^h National Center for Drug Screening   (China)

ⁱ SOUTHERN MEDICAL UNIVERSITY   (China)

^j SHANGHAI MUNICIPAL CENTER FOR DISEASE CONTROL AND PREVENTION   (China)

^k TONGJI UNIVERSITY   (China)

^l CHINESE CENTER FOR DISEASE CONTROL AND PREVENTION   (China)

^m SHANGHAI INSTITUTE OF ORGANIC CHEMISTRY   (China)

ⁿ INSTITUTE OF PLANT PROTECTION   (China)

more..

Author keywords

DNA sequencing; H1 and H3 subtypes; HA gene; Influenza A virus; Specific amplification by RT PCT

Indexed keywords

INFLUENZA A VIRUS; INFLUENZAVIRUS A; ORTHOMYXOVIRIDAE;

EID: 70349327793     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-009-0433-7     Document Type: Article

References (3)

1. Ghedin E, Sengamalay N A, Shumway M, et al. Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution. Nature, 2005, 437: 1162-1166
2. Leutenegger C M, Higgins J, Matthews T B, et al. Real-time TaqMan PCR as a specific and more sensitive alternative to the branched-chain DNA assay for quantitation of simian immunodeficiency virus RNA. AIDS Res Hum Retroviruses, 2001, 17: 243-251
3. Li K B. ClustalW-MPI: ClustalW analysis using distributed and parallel computing. Bioinformatics, 2003, 19: 1585-1586