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Volumn 25, Issue 18, 2009, Pages 2450-2451

ViTraM: Visualization of transcriptional modules

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Indexed keywords

TRANSCRIPTION FACTOR;

EID: 69849112773     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp400     Document Type: Article
Times cited : (2)

References (10)
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  • 2
    • 38549140094 scopus 로고    scopus 로고
    • Gama-Castro,S. et al, 2008 RegulonDB (version 6.0, Gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Nucleic Acids Res, 36, D120-D124
    • Gama-Castro,S. et al. (2008) RegulonDB (version 6.0): Gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation. Nucleic Acids Res., 36, D120-D124.
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    • Grothaus,G.A. et al. (2006) Automatic layout and visualization of biclusters. Algorithms Mol. Biol., 1, 15.
  • 4
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    • From molecular to modular cell biology
    • Hartwell,L.H. et al. (1999) From molecular to modular cell biology. Nature, 402, C47-C52.
    • (1999) Nature , vol.402
    • Hartwell, L.H.1
  • 5
    • 63449134229 scopus 로고    scopus 로고
    • DISTILLER: A data integration framework to reveal condition dependency of complex regulons in Escherichia coli
    • Lemmens,K. et al. (2009) DISTILLER: A data integration framework to reveal condition dependency of complex regulons in Escherichia coli. Genome Biol., 10, R27.
    • (2009) Genome Biol , vol.10
    • Lemmens, K.1
  • 6
    • 33745128746 scopus 로고    scopus 로고
    • Inferring transcriptional modules from ChIP-chip, motif and microarray data
    • Lemmens,K. et al. (2006) Inferring transcriptional modules from ChIP-chip, motif and microarray data. Genome Biol., 7, R37.
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    • Lemmens, K.1
  • 8
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    • BicOverlapper: A tool for bicluster visualization
    • Santamaria,R. et al. (2008) BicOverlapper: A tool for bicluster visualization. Bioinformatics, 24, 1212-1213.
    • (2008) Bioinformatics , vol.24 , pp. 1212-1213
    • Santamaria, R.1
  • 9
    • 1542357674 scopus 로고    scopus 로고
    • Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
    • Tanay,A. et al. (2004) Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proc. Natl Acad. Sci. USA, 101 2981-2986.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 2981-2986
    • Tanay, A.1
  • 10
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    • Learning module networks from genome-wide location and expression data
    • Xu,X. et al. (2004) Learning module networks from genome-wide location and expression data. FEBS Lett., 578, 297-304.
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    • Xu, X.1


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