HI: Haplotype improver using paired-end short reads

Bioinformatics

Volumn 25, Issue 18, 2009, Pages 2436-2437

  Long, Quan ^a   MacArthur, Daniel ^a   Ning, Zemin ^a   Tyler Smith, Chris ^a  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; COMPUTER PROGRAM; HAPLOTYPE MAP; HETEROZYGOSITY; INFORMATION PROCESSING; INTERNET; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; HAPLOTYPES; MOLECULAR SEQUENCE DATA; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 69849097019     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp412     Document Type: Article

References (6)

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2. Kim,J.H. et al. (2007) Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi. Genome Res., 17, 1101-1110.
3. Li,L.M. et al. (2004) Haplotype reconstruction from SNP alignment. J. Comput. Biol., 11, 505-516.
4. Ning,Z. et al. (2001) SSAHA: A fast search method for large DNA databases. Genome Res., 11, 1725-1729.
5. Scheet,P. and Stephens,M. (2006) A fast and flexible statistical model for largescale population genotype data: Applications to inferring missing genotypes and haplotypic phase. Am. J. Hum. Genet., 78 629-644.
6. Stephens,M. et al. (2001) A new statistical method for haplotype reconstruction from population data. Am. J. Hum. Genet., 68, 978-989.