-
1
-
-
0036575444
-
Antisense RNAs everywhere?
-
Wagner,E.G.H. and Flärdh,K. (2002) Antisense RNAs everywhere? Trends Genet., 18, 223-226.
-
(2002)
Trends Genet
, vol.18
, pp. 223-226
-
-
Wagner, E.G.H.1
Flärdh, K.2
-
2
-
-
0030956463
-
Efficient hammer-head ribozyme and antisense RNA targeting in a slow ribosome Escherichia coli mutant
-
Chen,H., Ferbeyre,G. and Cedergren,R. (1997) Efficient hammer-head ribozyme and antisense RNA targeting in a slow ribosome Escherichia coli mutant. Nat. Biotechnol., 15, 432-435.
-
(1997)
Nat. Biotechnol
, vol.15
, pp. 432-435
-
-
Chen, H.1
Ferbeyre, G.2
Cedergren, R.3
-
3
-
-
1542333740
-
The translation start codon region is sensitive to antisense PNA inhibition in Escherichia coli
-
Dryselius,R., Aswasti,S.K., Rajarao,G.K., Nielsen,P.E. and Good,L. (2003) The translation start codon region is sensitive to antisense PNA inhibition in Escherichia coli. Oligonucleotides, 13, 427-433.
-
(2003)
Oligonucleotides
, vol.13
, pp. 427-433
-
-
Dryselius, R.1
Aswasti, S.K.2
Rajarao, G.K.3
Nielsen, P.E.4
Good, L.5
-
4
-
-
33845667323
-
Paired termini stabilize antisense RNAs and enhance conditional gene silencing in Escherichia coli
-
Nakashima,N., Tamura,T. and Good,L. (2006) Paired termini stabilize antisense RNAs and enhance conditional gene silencing in Escherichia coli. Nucleic Acids Res., 34, e138.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Nakashima, N.1
Tamura, T.2
Good, L.3
-
5
-
-
0035929121
-
Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA
-
Ji,Y.D., Zhang,B., van Horn,S.F., Warren,P., Woodnutt,G., Burnham,M.K.R. and Rosenberg,M. (2001) Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA. Science, 293, 2266-2269.
-
(2001)
Science
, vol.293
, pp. 2266-2269
-
-
Ji, Y.D.1
Zhang, B.2
van Horn, S.F.3
Warren, P.4
Woodnutt, G.5
Burnham, M.K.R.6
Rosenberg, M.7
-
6
-
-
0037337740
-
Design of antisense RNA constructs for downregulation of the acetone formation pathway of Clostridium acetobutylicum
-
Tummala,S.B., Welker,N.E. and Papoutsakis,E.T. (2003) Design of antisense RNA constructs for downregulation of the acetone formation pathway of Clostridium acetobutylicum. J. Bacteriol., 185, 1923-1934.
-
(2003)
J. Bacteriol
, vol.185
, pp. 1923-1934
-
-
Tummala, S.B.1
Welker, N.E.2
Papoutsakis, E.T.3
-
7
-
-
19744382790
-
Tetracycline-inducible gene regulation in mycobacteria
-
Blokpoel,M.C.J., Murphy,H.N., O'Toole,R., Wiles,S., Runn,E.S.C., Stewart,G.R., Young,D.B. and Robertson,B.D. (2005) Tetracycline-inducible gene regulation in mycobacteria. Nucleic Acids Res., 33, e22.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Blokpoel, M.C.J.1
Murphy, H.N.2
O'Toole, R.3
Wiles, S.4
Runn, E.S.C.5
Stewart, G.R.6
Young, D.B.7
Robertson, B.D.8
-
8
-
-
34247540355
-
Antisense-RNA-mediated decreased synthesis of small, acid-soluble spore proteins leads to decreased resistance of Clostridium perfringens spores to moist heat and UV radiation
-
Raju,D., Setlow,P. and Sarker,M.R. (2007) Antisense-RNA-mediated decreased synthesis of small, acid-soluble spore proteins leads to decreased resistance of Clostridium perfringens spores to moist heat and UV radiation. Appl. Environ. Microbiol., 73, 2048-2053.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 2048-2053
-
-
Raju, D.1
Setlow, P.2
Sarker, M.R.3
-
9
-
-
0032986060
-
Antisense RNA strategies for metabolic engineering of Clostridium acetobutylicum
-
Desai,R.P. and Papoutsakis,E.T. (1999) Antisense RNA strategies for metabolic engineering of Clostridium acetobutylicum. Appl. Environ. Microbiol., 65, 936-945.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 936-945
-
-
Desai, R.P.1
Papoutsakis, E.T.2
-
10
-
-
0042431780
-
Down-regulation of acetate pathway through antisense strategy in Escherichia coli: Improved foreign protein production
-
Kim,J.Y.H. and Cha,H.J. (2003) Down-regulation of acetate pathway through antisense strategy in Escherichia coli: Improved foreign protein production. Biotechnol. Bioeng., 83, 841-853.
-
(2003)
Biotechnol. Bioeng
, vol.83
, pp. 841-853
-
-
Kim, J.Y.H.1
Cha, H.J.2
-
11
-
-
4644233997
-
Isolation and characterization of a rolling-circle-type plasmid from Rhodococcus erythropolis and application of the plasmid to multiple-recombinant-protein expression
-
Nakashima,N. and Tamura,T. (2004) Isolation and characterization of a rolling-circle-type plasmid from Rhodococcus erythropolis and application of the plasmid to multiple-recombinant-protein expression. Appl. Environ. Microbiol., 70, 5557-5568.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 5557-5568
-
-
Nakashima, N.1
Tamura, T.2
-
12
-
-
12844258276
-
Isolation of chromosomal mutations that affect carotenoid production in Escherichia coli: Mutations alter copy number of ColE1-type plasmids
-
Tao,L., Jackson,R.E., Rouvière,P.E. and Cheng,Q. (2005) Isolation of chromosomal mutations that affect carotenoid production in Escherichia coli: Mutations alter copy number of ColE1-type plasmids. FEMS Microbiol. Lett., 243, 227-233.
-
(2005)
FEMS Microbiol. Lett
, vol.243
, pp. 227-233
-
-
Tao, L.1
Jackson, R.E.2
Rouvière, P.E.3
Cheng, Q.4
-
13
-
-
0019888537
-
Evidence for two functional gal promoters in intact Escherichia coli cells
-
Aiba,H., Adhya,S. and de Crombrugghe,B. (1981) Evidence for two functional gal promoters in intact Escherichia coli cells. J. Biol. Chem., 256, 1905-1910.
-
(1981)
J. Biol. Chem
, vol.256
, pp. 1905-1910
-
-
Aiba, H.1
Adhya, S.2
de Crombrugghe, B.3
-
14
-
-
33646759934
-
Expression analysis of stress-specific responsive genes in two-stage continuous cultures of Escherichia coli using cDNA microarray and real-time RT-PCR analysis
-
Kim,B.C. and Gu,M.B. (2006) Expression analysis of stress-specific responsive genes in two-stage continuous cultures of Escherichia coli using cDNA microarray and real-time RT-PCR analysis. Enzyme Microb. Technol., 39, 440-446.
-
(2006)
Enzyme Microb. Technol
, vol.39
, pp. 440-446
-
-
Kim, B.C.1
Gu, M.B.2
-
15
-
-
0001641514
-
Mutaions of bacteria from virus sensitivity to virus resistance
-
Luria,S.E. and Delbrück,M. (1943) Mutaions of bacteria from virus sensitivity to virus resistance. Genetics, 28, 491-511.
-
(1943)
Genetics
, vol.28
, pp. 491-511
-
-
Luria, S.E.1
Delbrück, M.2
-
16
-
-
41549090370
-
New pSC101-derivative cloning vectors with elevated copy numbers
-
Peterson,J. and Phillips,G.J. (2008) New pSC101-derivative cloning vectors with elevated copy numbers. Plasmid, 59, 193-201.
-
(2008)
Plasmid
, vol.59
, pp. 193-201
-
-
Peterson, J.1
Phillips, G.J.2
-
17
-
-
34247557976
-
Tightly regulated, high-level expression from controlled copy number vectors based on the replicon of temperate phage N15
-
Mardanov,A.V., Strakhova,T.S., Smagin,V.A. and Ravin,N.V. (2007) Tightly regulated, high-level expression from controlled copy number vectors based on the replicon of temperate phage N15. Gene, 395, 15-21.
-
(2007)
Gene
, vol.395
, pp. 15-21
-
-
Mardanov, A.V.1
Strakhova, T.S.2
Smagin, V.A.3
Ravin, N.V.4
-
18
-
-
0021298879
-
Analysis of copy number control elements in the region of the vegetative replication origin of the broad host range plasmid RK2
-
Thomas,C.M., Cross,M.A., Hussain,A.A.K. and Smith,C.A. (1984) Analysis of copy number control elements in the region of the vegetative replication origin of the broad host range plasmid RK2. EMBO J., 3, 57-63.
-
(1984)
EMBO J
, vol.3
, pp. 57-63
-
-
Thomas, C.M.1
Cross, M.A.2
Hussain, A.A.K.3
Smith, C.A.4
-
19
-
-
0346882657
-
PepN is the major aminopeptidase in Escherichia coli: Insights on substrate specificity and role during sodium-salicylate-induced stress
-
Chandu,D. and Nandi,D. (2003) PepN is the major aminopeptidase in Escherichia coli: Insights on substrate specificity and role during sodium-salicylate-induced stress. Microbiology, 149, 3437-3447.
-
(2003)
Microbiology
, vol.149
, pp. 3437-3447
-
-
Chandu, D.1
Nandi, D.2
-
20
-
-
3242735062
-
Tightly regulated vectors for the cloning and expression of toxic genes
-
Anthony,L.C., Suzuki,H. and Filutowicz,M. (2004) Tightly regulated vectors for the cloning and expression of toxic genes. J. Microbiol. Methods, 58, 243-250.
-
(2004)
J. Microbiol. Methods
, vol.58
, pp. 243-250
-
-
Anthony, L.C.1
Suzuki, H.2
Filutowicz, M.3
-
21
-
-
23344450789
-
Characterization of the acetate-producing pathways in Escherichia coli
-
Dittrich,C.R., Bennett,G.N. and San,K.Y. (2005) Characterization of the acetate-producing pathways in Escherichia coli. Biotechnol. Prog., 21, 1062-1067.
-
(2005)
Biotechnol. Prog
, vol.21
, pp. 1062-1067
-
-
Dittrich, C.R.1
Bennett, G.N.2
San, K.Y.3
-
22
-
-
0025236475
-
Improved expression of human interleukin-2 in high-cell-density fermentor cultures of Escherichia coli
-
Bauer,K.A., Ben-Bassat,A., Dawson,M., De La Puente,V.T. and Neway,J.O. (1990) Improved expression of human interleukin-2 in high-cell-density fermentor cultures of Escherichia coli. App. Environ. Microbiol., 56, 1296-1302.
-
(1990)
App. Environ. Microbiol
, vol.56
, pp. 1296-1302
-
-
Bauer, K.A.1
Ben-Bassat, A.2
Dawson, M.3
De La Puente, V.T.4
Neway, J.O.5
-
23
-
-
1442306213
-
Engineering Escherichia coli for efficient conversion of glucose to pyruvate
-
Causey,T.B., Shanmugam,K.T., Yomano,L.P. and Ingram,L.O. (2004) Engineering Escherichia coli for efficient conversion of glucose to pyruvate. Proc. Natl Acad. Sci. USA, 101, 2235-2240.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 2235-2240
-
-
Causey, T.B.1
Shanmugam, K.T.2
Yomano, L.P.3
Ingram, L.O.4
-
24
-
-
14844347657
-
Separation of mutation avoidance and antirecombination functions in an Escherichia coli mutS mutant
-
Calmann,M.A., Nowosielska,A. and Marinus,M.G. (2005) Separation of mutation avoidance and antirecombination functions in an Escherichia coli mutS mutant. Nucleic Acids Res., 33, 1193-1200.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1193-1200
-
-
Calmann, M.A.1
Nowosielska, A.2
Marinus, M.G.3
-
25
-
-
21344461670
-
MutS inhibits RecA-mediated strand transfer with methylated DNA substrates
-
Calmann,M.A., Evans,J.E. and Marinus,M.G. (2005) MutS inhibits RecA-mediated strand transfer with methylated DNA substrates. Nucleic Acids Res., 33, 3591-3597.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 3591-3597
-
-
Calmann, M.A.1
Evans, J.E.2
Marinus, M.G.3
-
26
-
-
33845614522
-
The involvement of replication in single stranded oligonucleotide-mediated gene repair
-
Huen,M.S.Y., Li,X.T., Lu,L.Y., Watt,R.M., Liu,D.P. and Huang,J.D. (2006) The involvement of replication in single stranded oligonucleotide-mediated gene repair. Nucleic Acids Res., 34 6183-6194.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 6183-6194
-
-
Huen, M.S.Y.1
Li, X.T.2
Lu, L.Y.3
Watt, R.M.4
Liu, D.P.5
Huang, J.D.6
-
27
-
-
0037494980
-
Silencing of the gene coding for the ε subunit of DNA polymerase III slows down the growth rate of Escherichia coli populations
-
Stefan,A., Reggiani,L., Cianchetta,S., Radeghieri,A., Rodriguez,A. and Hochkoeppler,A. (2003) Silencing of the gene coding for the ε subunit of DNA polymerase III slows down the growth rate of Escherichia coli populations. FEBS Lett., 546, 295-299.
-
(2003)
FEBS Lett
, vol.546
, pp. 295-299
-
-
Stefan, A.1
Reggiani, L.2
Cianchetta, S.3
Radeghieri, A.4
Rodriguez, A.5
Hochkoeppler, A.6
-
28
-
-
34247122824
-
Efficient silencing of the gene coding for the e subunit of DNA polymerase III in Escherichia coli is triggered by antisense RNAs featuring stability in vivo
-
Stefan,A., Tabler,M. and Hochkoeppler,A. (2007) Efficient silencing of the gene coding for the e subunit of DNA polymerase III in Escherichia coli is triggered by antisense RNAs featuring stability in vivo. FEMS Microbiol. Lett., 270, 277-283.
-
(2007)
FEMS Microbiol. Lett
, vol.270
, pp. 277-283
-
-
Stefan, A.1
Tabler, M.2
Hochkoeppler, A.3
-
29
-
-
0036742429
-
Escherichia coli strains (ndk) lacking nudeoside diphosphate kinase are powerful mutators for base substitutions and frameshifts in mismatch-repair-deficient strains
-
Miller,J.H., Funchain,P., Clendenin,W., Huang,T., Nguyen,A., Wolff,E., Yeung,A., Chiang,J.H., Garibyan,L., Slupska,M.M. et al. (2002) Escherichia coli strains (ndk) lacking nudeoside diphosphate kinase are powerful mutators for base substitutions and frameshifts in mismatch-repair-deficient strains. Genetics, 162, 5-13.
-
(2002)
Genetics
, vol.162
, pp. 5-13
-
-
Miller, J.H.1
Funchain, P.2
Clendenin, W.3
Huang, T.4
Nguyen, A.5
Wolff, E.6
Yeung, A.7
Chiang, J.H.8
Garibyan, L.9
Slupska, M.M.10
-
30
-
-
0032972974
-
Escherichia coli mutator genes
-
Horst,J.P., Wu,T.H. and Marinus,M.G. (1999) Escherichia coli mutator genes. Trend Microbiol., 7, 29-36.
-
(1999)
Trend Microbiol
, vol.7
, pp. 29-36
-
-
Horst, J.P.1
Wu, T.H.2
Marinus, M.G.3
-
31
-
-
0035075441
-
Bactericidal antisense effects of peptide-PNA conjugates
-
Good,L., Awasthi,S.K., Dryselius,R., Larsson,O. and Nielsen,P.E. (2001) Bactericidal antisense effects of peptide-PNA conjugates. Nat. Biotechnol., 19, 360-364.
-
(2001)
Nat. Biotechnol
, vol.19
, pp. 360-364
-
-
Good, L.1
Awasthi, S.K.2
Dryselius, R.3
Larsson, O.4
Nielsen, P.E.5
-
32
-
-
0025873742
-
Allelic exchange in Escherichia coli using the Bacillus subtilis sacB gene and a temperature-sensitive pSC101 replicon
-
Blomfield,I.C., Vaughn,V., Rest,R.F. and Eisenstein,B.I. (1991) Allelic exchange in Escherichia coli using the Bacillus subtilis sacB gene and a temperature-sensitive pSC101 replicon. Mol. Microbiol. 5, 1447-1457.
-
(1991)
Mol. Microbiol
, vol.5
, pp. 1447-1457
-
-
Blomfield, I.C.1
Vaughn, V.2
Rest, R.F.3
Eisenstein, B.I.4
-
33
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko,K.A. and Wanner,B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl Acad. Sci. USA, 97, 6640-6645.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
34
-
-
33750986817
-
Rational design and rapid screening of antisense oligonucleotides for prokaryotic gene modulation
-
Shao,Y., Wu,Y., Chan,C.Y., McDonough,K. and Ding,Y. (2006) Rational design and rapid screening of antisense oligonucleotides for prokaryotic gene modulation. Nucleic Acids Res., 34, 5660-5669.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5660-5669
-
-
Shao, Y.1
Wu, Y.2
Chan, C.Y.3
McDonough, K.4
Ding, Y.5
-
35
-
-
34247158257
-
Mechanism of RNA silencing by Hfq-binding small RNAs
-
Aiba,H. (2007) Mechanism of RNA silencing by Hfq-binding small RNAs. Curr. Opin. Microbiol., 10, 134-139.
-
(2007)
Curr. Opin. Microbiol
, vol.10
, pp. 134-139
-
-
Aiba, H.1
-
36
-
-
57149111586
-
Small RNA binding to 5′ mRNA coding region inhibits translational initiation
-
Bouvier,M, Sharma,C.M., Mika,F., Nierhaus,K.H. and Vogel,J. (2008) Small RNA binding to 5′ mRNA coding region inhibits translational initiation. Mol. Cell, 32, 751-753.
-
(2008)
Mol. Cell
, vol.32
, pp. 751-753
-
-
Bouvier, M.1
Sharma, C.M.2
Mika, F.3
Nierhaus, K.H.4
Vogel, J.5
-
37
-
-
0031113943
-
An efficient random mutagenesis technique using an E. coli mutator strain
-
Greener,A., Callahan,M. and Jerpseth,B. (1997) An efficient random mutagenesis technique using an E. coli mutator strain. Mol. Biotechnol., 7, 189-195.
-
(1997)
Mol. Biotechnol
, vol.7
, pp. 189-195
-
-
Greener, A.1
Callahan, M.2
Jerpseth, B.3
-
38
-
-
19644371928
-
One-step random mutagenesis by error-prone rolling circle amplification
-
Fujii,R., Kitaoka,M. and Hayashi,K. (2004) One-step random mutagenesis by error-prone rolling circle amplification. Nucleic Acids Res., 32, e145.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Fujii, R.1
Kitaoka, M.2
Hayashi, K.3
-
39
-
-
0043194096
-
Targeted gene evolution in Escherichia coli using a highly error-prone DNA polymerase I
-
Camps,M., Naukkarinen,J., Johnson,B.P. and Loeb,L.A. (2003) Targeted gene evolution in Escherichia coli using a highly error-prone DNA polymerase I. Proc. Natl Acad. Sci. USA, 100, 9727-9732.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 9727-9732
-
-
Camps, M.1
Naukkarinen, J.2
Johnson, B.P.3
Loeb, L.A.4
-
40
-
-
18844392599
-
Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli
-
Alper,H., Jin,Y.S., Moxley,J.F. and Stephanopoulos,G. (2005) Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli. Metab. Eng., 7, 155-164.
-
(2005)
Metab. Eng
, vol.7
, pp. 155-164
-
-
Alper, H.1
Jin, Y.S.2
Moxley, J.F.3
Stephanopoulos, G.4
-
41
-
-
46549087174
-
Importance of systems biology in engineering microbes for biofuel production
-
Mukhopadhyay,A., Redding,A.M., Rutherford,B.J. and Keasling,J.D. (2008) Importance of systems biology in engineering microbes for biofuel production. Curr. Opin. Biotechnol., 19, 228-234.
-
(2008)
Curr. Opin. Biotechnol
, vol.19
, pp. 228-234
-
-
Mukhopadhyay, A.1
Redding, A.M.2
Rutherford, B.J.3
Keasling, J.D.4
-
42
-
-
31944450795
-
Discovery of FabH/FabF inhibitors from natural products
-
Young,K., Jayasuriya,H., Ondeyka,J.G., Herath,K., Zhang,C.W., Kodali,S., Galgoci,A., Painter,R., Brown-Driver,V., Yamamoto,R. et al. (2006) Discovery of FabH/FabF inhibitors from natural products. Antimicrob. Agents Chemother., 50, 519-526.
-
(2006)
Antimicrob. Agents Chemother
, vol.50
, pp. 519-526
-
-
Young, K.1
Jayasuriya, H.2
Ondeyka, J.G.3
Herath, K.4
Zhang, C.W.5
Kodali, S.6
Galgoci, A.7
Painter, R.8
Brown-Driver, V.9
Yamamoto, R.10
-
43
-
-
49049096327
-
Isolation, structure, and antibacterial activity of phaeosphenone from a Phaeosphaeria sp. discovered by antisense strategy
-
Zhang,C.W., Ondeyka,J.G., Zink,D.L., Basilio,A., Vicente,F., Collado,J., Platas,G., Bills,G., Huber,J., Dorso,K. et al. (2008) Isolation, structure, and antibacterial activity of phaeosphenone from a Phaeosphaeria sp. discovered by antisense strategy. J. Nat. Prod. 71, 1304-1307.
-
(2008)
J. Nat. Prod
, vol.71
, pp. 1304-1307
-
-
Zhang, C.W.1
Ondeyka, J.G.2
Zink, D.L.3
Basilio, A.4
Vicente, F.5
Collado, J.6
Platas, G.7
Bills, G.8
Huber, J.9
Dorso, K.10
-
44
-
-
33744994317
-
Platensimycin is a selective FabF inhibitor with potent antibiotic properties
-
Wang,J., Soisson,S.M., Young,K., Shoop,W., Kodali,S., Galgoci,A., Painter,R., Parthasarathy,G., Tang,Y.S., Cummings,R. et al. (2006) Platensimycin is a selective FabF inhibitor with potent antibiotic properties. Nature, 441, 358-361.
-
(2006)
Nature
, vol.441
, pp. 358-361
-
-
Wang, J.1
Soisson, S.M.2
Young, K.3
Shoop, W.4
Kodali, S.5
Galgoci, A.6
Painter, R.7
Parthasarathy, G.8
Tang, Y.S.9
Cummings, R.10
-
45
-
-
0024283925
-
The nucleotide-sequence of pACYC184
-
Rose,R.E. (1988) The nucleotide-sequence of pACYC184. Nucleic Acids Res., 16, 355.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 355
-
-
Rose, R.E.1
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