Detection of conformationally changed MBP using intramolecular FRET

Biochemical and Biophysical Research Communications

Volumn 388, Issue 3, 2009, Pages 560-564

  Park, Kyoungsook ^a   Lee, Lan Hee ^a,b   Shin, Yong Beom ^a   Yi, So Yeon ^a   Kang, Yong Won ^c   Sok, Dai Eun ^b   Chung, Jin Woong ^d   Chung, Bong Hyun ^a   Kim, Moonil ^a  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Chungnam National University   (South Korea)

^c Yonsei University   (South Korea)

^d Dong A University   (South Korea)

Author keywords

Conformational change; Fluorescence resonance energy transfer, FRET; Maltose binding protein, MBP

Indexed keywords

GLUCOSE; MALTOSE; MALTOSE BINDING PROTEIN;

AMINO TERMINAL SEQUENCE; ARTICLE; BLEACHING; CARBOXY TERMINAL SEQUENCE; FLUORESCENCE RESONANCE ENERGY TRANSFER; IN VITRO STUDY; LIGAND BINDING; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; PROTEIN TARGETING;

CARRIER PROTEINS; FLUORESCENCE RESONANCE ENERGY TRANSFER; MALTOSE; MALTOSE-BINDING PROTEINS; PROTEIN CONFORMATION;

EID: 69549111841     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2009.08.049     Document Type: Article

References (24)

1. M. Edidin, Fluorescence resonance energy transfer: techniques for measuring molecular conformation and molecular proximity, Curr. Protoc. Immunol. (2003) Unit 18.10 (Chapter 18).
2. Eggeling C., Jäger S., Winkler D., and Kask P. Comparison of different fluorescence fluctuation methods for their use in FRET assays: monitoring a protease reaction. Curr. Pharm. Biotechnol. 6 (2005) 351-371
3. Selvin P.R. Fluorescence resonance energy transfer. Methods Enzymol. 246 (1995) 300-334
4. Stryer L., and Haugland R.P. Energy transfer: a spectroscopic ruler. Proc. Natl. Acad. Sci. USA 58 (1967) 719-726
5. Sytnik A., and Litvinyuk I. Energy transfer to a proton-transfer fluorescence probe: tryptophan to a flavonol in human serum albumin. Proc. Natl. Acad. Sci. USA 93 (1996) 12959-12963
6. Förster T. Intermolecular energy transfer and fluorescence. Ann. Phys. 2 (1948) 55-75
7. Algar W.R., Massey M., and Krull U.J. Fluorescence resonance energy transfer and complex formation between thiazole orange and various dye-DNA conjugates: implications in signaling nucleic acid hybridization. J. Fluoresc. 16 (2006) 555-567
8. Okamura Y., and Watanabe Y. Detecting RNA/DNA hybridization using double-labeled donor probes with enhanced fluorescence resonance energy transfer signals. Methods Mol. Biol. 335 (2006) 43-56
9. D. Llères, S. Swift, A.I. Lamond, Detecting protein-protein interactions in vivo with FRET using multiphoton fluorescence lifetime imaging microscopy (FLIM), Curr. Protoc. Cytom. (2007) Unit 12.10 (Chapter 12).
10. Maurel D., Comps-Agrar L., Brock C., Rives M.L., Bourrier E., Ayoub M.A., Bazin H., Tinel N., Durroux T., Prézeau L., Trinquet E., and Pin J.P. Cell-surface protein-protein interaction analysis with time-resolved FRET and snap-tag technologies: application to GPCR oligomerization. Nat. Methods 5 (2008) 561-567
11. Hieb A.R., Halsey W.A., Betterton M.D., Perkins T.T., Kugel J.F., and Goodrich J.A. TFIIA changes the conformation of the DNA in TBP/TATA complexes and increases their kinetic stability. J. Mol. Biol. 372 (2007) 619-632
12. Lorenz M., Hillisch A., Payet D., Buttinelli M., Travers A., and Diekmann S. DNA bending induced by high mobility group proteins studied by fluorescence resonance energy transfer. Biochemistry 38 (1999) 12150-12158
13. Hofmann R.M., Cotton G.J., Chang E.J., Vidal E., Veach D., Bornmann W., and Muir T.W. Fluorescent monitoring of kinase activity in real time: development of a robust fluorescence-based assay for Abl tyrosine kinase activity. Bioorg. Med. Chem. Lett. 11 (2001) 3091-3094
14. Fehr M., Frommer W.B., and Lalonde S. Visualization of maltose uptake in living yeast cells by fluorescent nanosensors. Proc. Natl. Acad. Sci. USA 99 (2002) 9846-9851
15. Medintz I.L., and Deschamps J.R. Maltose-binding protein: a versatile platform for prototyping biosensing. Curr. Opin. Biotechnol. 17 (2006) 17-27
16. Sharff A.J., Rodseth L.E., and Quiocho F.A. Refined 1.8-A structure reveals the mode of binding of beta-cyclodextrin to the maltodextrin binding protein. Biochemistry 32 (1993) 10553-10559
17. Gestwicki J.E., Hsieh H.V., and Pitner J.B. Using receptor conformational change to detect low molecular weight analytes by surface plasmon resonance. Anal. Chem. 73 (2001) 5732-5737
18. Takada K., Naal Z., Park J.H., Shapleigh J.P., Bernhard S., Batt C.A., and Abruna H.D. Study of specific binding of maltose binding protein to pyrrole-derived bipyridinium film by quartz crystal microbalance. Langmuir 18 (2002) 4892-4897
19. Valeur B. Molecular Fluorescence. Principles and Applications (2002), Wiley-VCH, Weinheim
20. Piston D.W., and Kremers G.J. Fluorescent protein FRET: the good, the bad and the ugly. Trends Biochem. Sci. 32 (2007) 407-414
21. Rizzo M.A., Springer G., Segawa K., Zipfel W.R., and Piston D.W. Optimization of pairings and detection conditions for measurement of FRET between cyan and yellow fluorescent proteins. Microsc. Microanal. 12 (2006) 238-254
22. Park H.J., Kim S.K., Park K., Lyu H.K., Lee C.S., Chung S.J., Yun W.S., Kim M., and Chung B.H. An ISFET biosensor for the monitoring of maltose-induced conformational changes in MBP. FEBS Lett. 583 (2009) 157-162
23. Jeong J., Kim S.K., Ahn J., Park K., Jeong E.J., Kim M., and Chung B.H. Monitoring of conformational change in maltose binding protein using split green fluorescent protein. Biochem. Biophys. Res. Commun. 339 (2006) 647-651
24. Karpova T.S., Baumann C.T., He L., Wu X., Grammer A., Lipsky P., Hager G.L., and McNally J.G. Fluorescence resonance energy transfer from cyan to yellow fluorescent protein detected by acceptor photobleaching using confocal microscopy and a single laser. J. Microsc. 209 (2003) 56-70