Massilia niabensis sp. nov. and Massilia niastensis sp. nov., isolated from air samples

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 7, 2009, Pages 1656-1660

  Weon, Hang Yeon ^a   Kim, Byung Yong ^b   Hong, Seung Beom ^b   Jeon, Young Ah ^b   Koo, Bon Sung ^b   Kwon, Soon Wo ^b   Stackebrandt, Erko ^c  

^a National Institute of Animal Science   (South Korea)

^b National Institute of Agricultural Science   (South Korea)

^c LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; QUINONE DERIVATIVE; BACTERIAL DNA; RNA 16S;

AEROBIC BACTERIUM; AIR SAMPLING; AIRBORNE BACTERIUM; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CHEMOTAXONOMY; CONTROLLED STUDY; DNA CONTENT; DNA DNA HYBRIDIZATION; GRAM NEGATIVE BACTERIUM; MASSILIA NIABENSIS; MASSILIA NIASTENSIS; MOLECULAR PHYLOGENY; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SOUTH KOREA; TYPE STRAIN; CLASSIFICATION; DNA BASE COMPOSITION; DNA SEQUENCE; GENETICS; GENOTYPE; ISOLATION AND PURIFICATION; KOREA; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; OXALOBACTERACEAE; PHYLOGENY; PHYSIOLOGY; RNA GENE; SPECIES DIFFERENCE;

BACTERIA (MICROORGANISMS); MASSILIA; NEGIBACTERIA;

AIR MICROBIOLOGY; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, BACTERIAL; FATTY ACIDS; GENES, RRNA; GENOTYPE; KOREA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; OXALOBACTERACEAE; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 69449096841     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.006908-0     Document Type: Article

References (17)

1. Breznak, J. A. & Costilow, R. N. (1994). Physicochemical factors in growth. In Methods for General and Molecular Bacteriology, pp. 137- 154. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
2. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
3. Gallego, V., Sánchez-Porro, C., García, M. T. & Ventosa, A. (2006). Massilia aurea sp. nov., isolated from drinking water. Int J Syst Evol Microbiol 56, 2449-2453.
4. Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
5. Hiraishi, A. (1992). Direct automated sequencing of 16S rDNA amplified by polymerase chain reaction from bacterial cultures without DNA purification. Lett Appl Microbiol 15, 210-213.
6. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
7. La Scola, B., Birtles, R. J., Mallet, M. N. & Raoult, D. (1998). Massilia timonae gen. nov., sp. nov., isolated from blood of an immunocompromised patient with cerebellar lesions. J Clin Microbiol 36, 2847- 2852.
8. Lindquist, D., Murrill, D., Burran, W. P., Winans, G., Janda, J. M. & Probert, W. (2003). Characteristics of Massilia timonae and Massilia timonae-like isolates from human patients, with an emended description of the species. J Clin Microbiol 41, 192-196.
9. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159- 167.
10. Reasoner, D. J. & Geldreich, E. E. (1985). A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49, 1-7.
11. Saitou, N. & Nei, M. (1987). The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
12. Seldin, L. & Dubnau, D. (1985). Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains. Int J Syst Bacteriol 35, 151-154.
13. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
14. Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
15. Weon, H. Y., Kim, B. Y., Son, J. A., Jang, H. B., Hong, S. K., Go, S. J. & Kwon, S. W. (2008). Massilia aerilata sp. nov., isolated from an air sample. Int J Syst Evol Microbiol 58, 1422-1425.
16. Zhang, Y.-Q., Li, W.-J., Zhang, K.-Y., Tian, X.-P., Jiang, Y., Xu, L.-H., Jiang, C.-L. & Lai, R. (2006). Massilia dura sp. nov., Massilia albidiflava sp. nov., Massilia plicata sp. nov. and Massilia lutea sp. nov., isolated from soils in China. Int J Syst Evol Microbiol 56, 459- 463.
17. Zul, D., Wanner, G. & Overmann, J. (2008). Massilia brevitalea sp. nov., a novel betaproteobacterium isolated from lysimeter soil. Int J Syst Evol Microbiol 58, 1245-1251.