DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment

Applied and Environmental Microbiology

Volumn 75, Issue 17, 2009, Pages 5501-5506

  Sul, Woo Jun ^a   Park, Joonhong ^a,b   Quensen III, John F ^a   Rodrigues, Jorge L M ^a   Seliger, Laurie ^c   Tsoi, Tamara V ^a   Zylstra, Gerben J ^c   Tiedje, James M ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

^b Yonsei University   (South Korea)

^c RUTGERS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMPLIFICATION; AROMATIC COMPOUNDS; BACTERIOLOGY; CLONING; DNA; ISOTOPES; NUCLEIC ACIDS; ORGANIC POLLUTANTS; POLYCHLORINATED BIPHENYLS; PRINTED CIRCUITS; RIVER POLLUTION; SEDIMENTOLOGY; SULFUR COMPOUNDS;

16S RRNA GENE; BIPHENYL DIOXYGENASE; COMAMONAS TESTOSTERONI; CONTAMINATED RIVER SEDIMENTS; DIOXYGENASE GENES; DIOXYGENASES; FUNCTIONAL GENES; GAMMAPROTEOBACTERIA; GENETIC PROPERTIES; HORIZONTAL TRANSFER; METAGENOMICS; PCR AMPLIFICATION; RHODOCOCCUS SP; STABLE-ISOTOPE PROBING;

GENES;

BIPHENYL; DIOXYGENASE; DNA; ISOTOPE; OXYGENASE; POLYCHLORINATED BIPHENYL; RNA 16S;

BACTERIUM; DNA; ENZYME ACTIVITY; FLUVIAL DEPOSIT; GENE EXPRESSION; GENETIC ANALYSIS; GENOMICS; METABOLISM; PCB; POLYMERASE CHAIN REACTION; RNA; SEDIMENT POLLUTION; STABLE ISOTOPE;

ACHROMOBACTER; ARTICLE; BACTERIAL GROWTH; CLONE; COMAMONAS TESTOSTERONI; CONTROLLED STUDY; DNA PROBE; ENZYME SUBUNIT; GAMMAPROTEOBACTERIA; GENE AMPLIFICATION; GENE FUNCTION; GENE LIBRARY; METAGENOMICS; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PSEUDOMONAS; RHODOCOCCUS; RIVER; SEDIMENT; WATER CONTAMINATION;

ACHROMOBACTER; BACTERIA (MICROORGANISMS); COMAMONAS TESTOSTERONI; GAMMAPROTEOBACTERIA; PSEUDOMONAS; RHODOCOCCUS SP.;

EID: 69449083604     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00121-09     Document Type: Article

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