-
1
-
-
0021724874
-
Two-state model for bacterial chemoreceptor proteins
-
Asakura, S., and H. Honda. 1984. Two-state model for bacterial chemoreceptor proteins. J. Mol. Biol. 176:349-367.
-
(1984)
J. Mol. Biol.
, vol.176
, pp. 349-367
-
-
Asakura, S.1
Honda, H.2
-
2
-
-
28544450485
-
Design principles of a bacterial signalling network
-
DOI 10.1038/nature04228, PII N04228
-
Kollmann, M., L. Løvdok, K. Bartholomé, J. Timmer, and V. Sourjik. 2005. Design principles of a bacterial signaling network. Nature. 438:504-507. (Pubitemid 41742022)
-
(2005)
Nature
, vol.438
, Issue.7067
, pp. 504-507
-
-
Kollmann, M.1
Lovdok, L.2
Bartholome, K.3
Timmer, J.4
Sourjik, V.5
-
3
-
-
33845909561
-
The chemotactic behavior of computer-based surrogate bacteria
-
Bray, D., M. Levin, and K. Lipkow. 2007. The chemotactic behavior of computer-based surrogate bacteria. Curr. Biol. 17:R132-R134.
-
(2007)
Curr. Biol.
, vol.17
-
-
Bray, D.1
Levin, M.2
Lipkow, K.3
-
4
-
-
0036220793
-
Binding and diffusion of CheR molecules within a cluster of membrane receptors
-
Levin, M., T. S. Shimizu, and D. Bray. 2002. Binding and diffusion of CheR molecules within a cluster of membrane receptors. Biophys. J. 82:1809-1817. (Pubitemid 34280797)
-
(2002)
Biophysical Journal
, vol.82
, Issue.4
, pp. 1809-1817
-
-
Levin, M.D.1
Shimizu, T.S.2
Bray, D.3
-
5
-
-
11144264728
-
Simulated diffusion of phosphorylated CheY through the cytoplasm of Escherichia coli
-
DOI 10.1128/JB.187.1.45-53.2005
-
Lipkow, K., S. S. Andrews, and D. Bray. 2005. Diffusion of phosphorylated CheY through the cytoplasm of Escherichia coli. J. Bacteriol. 187:45-53. (Pubitemid 40024179)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.1
, pp. 45-53
-
-
Lipkow, K.1
Andrews, S.S.2
Bray, D.3
-
6
-
-
0038399793
-
A spatially extended stochastic model of the bacterial chemotaxis signaling pathway
-
Shimizu, T. S., S. V. Aksenov, and D. Bray. 2003. A spatially extended stochastic model of the bacterial chemotaxis signaling pathway. J. Mol. Biol. 329:291-309.
-
(2003)
J. Mol. Biol.
, vol.329
, pp. 291-309
-
-
Shimizu, T.S.1
Aksenov, S.V.2
Bray, D.3
-
7
-
-
0015526205
-
Chemotaxis in Escherichia coli analyzed by three-dimensional tracking
-
Berg, H., and D. Brown. 1972. Chemotaxis in Escherichia coli analyzed by three-dimensional tracking. Nature. 239:500-504.
-
(1972)
Nature
, vol.239
, pp. 500-504
-
-
Berg, H.1
Brown, D.2
-
8
-
-
1842484290
-
From molecular noise to behavioural variability in a single bacterium
-
DOI 10.1038/nature02404
-
Korobkova, E., T. Emonet, J. M. G. Vilar, T. S. Shimizu, and P. Cluzel. 2004. From molecular noise to behavioral variability in a single bacterium. Nature. 428:574-578. (Pubitemid 38480542)
-
(2004)
Nature
, vol.428
, Issue.6982
, pp. 574-578
-
-
Korobkova, E.1
Emonet, T.2
Villar, J.M.G.3
Shimizu, T.S.4
Cluzel, P.5
-
9
-
-
33746072604
-
Collective bacterial dynamics revealed using a three-dimensional population-scale defocused particle tracking technique
-
Wu, M., J. W. Roberts, S. Kim, D. L. Koch, and M. P. DeLisa. 2006. Collective bacterial dynamics revealed using a three-dimensional population- scale defocused particle tracking technique. Appl. Environ. Microbiol. 72:4987-4994.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 4987-4994
-
-
Wu, M.1
Roberts, J.W.2
Kim, S.3
Koch, D.L.4
DeLisa, M.P.5
-
10
-
-
0002641421
-
The random walk's guide to anomalous diffusion: A fractional dynamics approach
-
Metzler, R., and J. Klafter. 2000. The random walk's guide to anomalous diffusion: a fractional dynamics approach. Phys. Rep. 339:1-77.
-
(2000)
Phys. Rep.
, vol.339
, pp. 1-77
-
-
Metzler, R.1
Klafter, J.2
-
11
-
-
0037017933
-
Optimizing the encounter rate in biological interactions: Lévyversus Brownian strategies
-
Bartumeus, F., J. Catalan, U. L. Fulco, M.L. Lyra, and G.M. Viswanathan. 2002. Optimizing the encounter rate in biological interactions: Lévyversus Brownian strategies. Phys. Rev. Lett. 88:097901.
-
(2002)
Phys. Rev. Lett.
, vol.88
, pp. 097901
-
-
Bartumeus, F.1
Catalan, J.2
Fulco, U.L.3
Lyra, M.L.4
Viswanathan, G.M.5
-
12
-
-
27944498182
-
Animal search strategies: A quantitative random-walk analysis
-
Bartumeus, F., M. G. E. da Luz, G. M. Viswanathan, and J. Catalan. 2005. Animal search strategies: a quantitative random-walk analysis. Ecology. 86:3078-3087. (Pubitemid 41677458)
-
(2005)
Ecology
, vol.86
, Issue.11
, pp. 3078-3087
-
-
Bartumeus, F.1
Da Luz, M.G.E.2
Viswanathan, G.M.3
Catalan, J.4
-
13
-
-
28544449722
-
A stochastic model for intermittent search strategies
-
Benichou, O., M. Coppey, M. Moreau, P. H. Suet, and R. Voituriez. 2005. A stochastic model for intermittent search strategies. J. Phys. Condens. Matter. 17:S4275-S4286.
-
(2005)
J. Phys. Condens. Matter
, vol.17
-
-
Benichou, O.1
Coppey, M.2
Moreau, M.3
Suet, P.H.4
Voituriez, R.5
-
14
-
-
79051470886
-
Search dynamics at the edge of extinction: Anomalous diffusion as a critical survival state
-
Faustino, C. L., L. R. da Silva, M. G. E. da Luz, E. P. Raposo, and G. M. Viswanathan. 2007. Search dynamics at the edge of extinction: anomalous diffusion as a critical survival state. Europhys. Lett. 77:30002.
-
(2007)
Europhys. Lett.
, vol.77
, pp. 30002
-
-
Faustino, C.L.1
Da Silva, L.R.2
Da Luz, M.G.E.3
Raposo, E.P.4
Viswanathan, G.M.5
-
15
-
-
0029668502
-
Levy flight search patterns of wandering albatrosses
-
DOI 10.1038/381413a0
-
Viswanathan, G., V. Afanasyev, S. Buldyrev, E. Murphy, P. Prince, et al. 1996. Lévy flight search patterns of wandering albatrosses. Nature. 381:413-415. (Pubitemid 26162728)
-
(1996)
Nature
, vol.381
, Issue.6581
, pp. 413-415
-
-
Viswanathan, G.M.1
Afanasyev, V.2
Buldyrev, S.V.3
Murphy, E.J.4
Prince, P.A.5
Stanley, H.E.6
-
16
-
-
0033613429
-
Optimizing the success of random searches
-
Viswanathan, G. M., S. V. Buldyrev, S. Havlin, M. da Luz, E. Raposok, et al. 1999. Optimizing the success of random searches. Nature. 401:911-914.
-
(1999)
Nature
, vol.401
, pp. 911-914
-
-
Viswanathan, G.M.1
Buldyrev, S.V.2
Havlin, S.3
Da Luz, M.4
Raposok, E.5
-
17
-
-
35148881262
-
How many animals really do the Lévy walk?
-
Benhamou, S. 2007. How many animals really do the Lévy walk? Ecology. 88:1962-1969.
-
(2007)
Ecology
, vol.88
, pp. 1962-1969
-
-
Benhamou, S.1
-
18
-
-
47749102452
-
Deterministic walks with inverse-square power-law scaling are an emergent property of predators that use chemotaxis to locate randomly distributed prey
-
Reynolds, A. 2008. Deterministic walks with inverse-square power-law scaling are an emergent property of predators that use chemotaxis to locate randomly distributed prey. Phys. Rev. E. 78:011906.
-
(2008)
Phys. Rev. E
, vol.78
, pp. 011906
-
-
Reynolds, A.1
-
19
-
-
0030797355
-
Robustness in simple biochemical networks
-
Barkai, N., and S. Leibler. 1997. Robustness in simple biochemical networks. Nature. 387:913-917.
-
(1997)
Nature
, vol.387
, pp. 913-917
-
-
Barkai, N.1
Leibler, S.2
-
20
-
-
0034961694
-
STOCHSIM: Modelling of stochastic biomolecular processes
-
Le Novère, N., and T. S. Shimizu. 2001. StochSim: modeling of stochastic biomolecular processes. Bioinformatics. 6:575-576. (Pubitemid 32600510)
-
(2001)
Bioinformatics
, vol.17
, Issue.6
, pp. 575-576
-
-
Le Novere, N.1
Shimizu, T.S.2
-
21
-
-
0142039003
-
Noise in gene expression as the source of non-genetic individuality in the chemotactic response of Escherichia coli
-
DOI 10.1016/S0014-5793(03)00857-3
-
Levin, M. 2003. Noise in gene expression as the source of non-genetic individuality in the chemotactic response of Escherichia coli. FEBS Lett. 550:135-138. (Pubitemid 37281370)
-
(2003)
FEBS Letters
, vol.550
, Issue.1-3
, pp. 135-138
-
-
Levin, M.D.1
-
22
-
-
38949210309
-
Chemotaxis in Escherichia coli: A molecular model for robust precise adaptation
-
Hansen, C. H., R. G. Endres, and N. S. Wingreen. 2008. Chemotaxis in Escherichia coli: a molecular model for robust precise adaptation. PLOS Comp. Biol. 4:14-27.
-
(2008)
PLOS Comp. Biol.
, vol.4
, pp. 14-27
-
-
Hansen, C.H.1
Endres, R.G.2
Wingreen, N.S.3
-
23
-
-
44049092998
-
Protein exchange dynamics at chemoreceptor clusters in Escherichia coli
-
Schulmeister, S., M. Ruttorf, S. Thiem, D. Kentner, D. Lebiedz, et al. 2008. Protein exchange dynamics at chemoreceptor clusters in Escherichia coli. Proc. Natl. Acad. Sci. USA. 105:6403-6408.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 6403-6408
-
-
Schulmeister, S.1
Ruttorf, M.2
Thiem, S.3
Kentner, D.4
Lebiedz, D.5
-
24
-
-
25644456105
-
How white nose generates power-law switching in bacterial flagellar motors
-
Tu, Y., and G. Grinstein. 2005. How white nose generates power-law switching in bacterial flagellar motors. Phys. Rev. Lett. 94:208101.
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 208101
-
-
Tu, Y.1
Grinstein, G.2
-
25
-
-
85031346931
-
-
Reference deleted in proof
-
Reference deleted in proof.
-
-
-
-
26
-
-
39849092398
-
Scaling laws of marine predator search behavior
-
Sims, D.W., E. J. Southall, N. E. Humphries, G. C. Hays, C. J.A. Bradshaw, et al. 2008. Scaling laws of marine predator search behavior. Nature. 451:1098-1102.
-
(2008)
Nature
, vol.451
, pp. 1098-1102
-
-
Sims, D.W.1
Southall, E.J.2
Humphries, N.E.3
Hays, G.C.4
Bradshaw, C.J.A.5
-
27
-
-
4043118128
-
Lévy walk patterns in the foraging movements of spider monkeys (Ateles geoffroyi)
-
Ramos-Fernández, G., J.L. Mateos, O. Miramontes, G. Cocho, H. Larralde, et al. 2004. Lévy walk patterns in the foraging movements of spider monkeys (Ateles geoffroyi). Behav. Ecol. Sociobiol. 55:223-230.
-
(2004)
Behav. Ecol. Sociobiol.
, vol.55
, pp. 223-230
-
-
Ramos-Fernández, G.1
Mateos, J.L.2
Miramontes, O.3
Cocho, G.4
Larralde, H.5
-
28
-
-
31444431866
-
The scaling laws of human travel
-
Brockmann, D., L. Hufnagel, and T. Geisel. 2005. The scaling laws of human travel. Nature. 439:462-465.
-
(2005)
Nature
, vol.439
, pp. 462-465
-
-
Brockmann, D.1
Hufnagel, L.2
Geisel, T.3
-
29
-
-
33846983890
-
Lévy flights in Dobe Ju/'Hoansi foraging patterns
-
Brown, C. T., L. S. Liebovitch, and R. Glendon. 2007. Lévy flights in Dobe Ju/'Hoansi foraging patterns. Hum. Ecol. 35:129-138.
-
(2007)
Hum. Ecol.
, vol.35
, pp. 129-138
-
-
Brown, C.T.1
Liebovitch, L.S.2
Glendon, R.3
-
30
-
-
35548973986
-
Revisiting Lévy flight search patterns of wandering albatrosses, bumblebees and deer
-
Edwards, A. M., R. A. Phillips, N. W. Watkins, M. P. Freeman, E. J. Murphy, et al. 2007. Revisiting Lévy flight search patterns of wandering albatrosses, bumblebees and deer. Nature. 449:1044-1048.
-
(2007)
Nature
, vol.449
, pp. 1044-1048
-
-
Edwards, A.M.1
Phillips, R.A.2
Watkins, N.W.3
Freeman, M.P.4
Murphy, E.J.5
-
31
-
-
33846950846
-
Minimizing errors in identifying Lévy flight behavior of organisms
-
Sims, D. W., D. Righton, and J. W. Pitchford. 2007. Minimizing errors in identifying Lévy flight behavior of organisms. J. Anim. Ecol. 76:222-229.
-
(2007)
J. Anim. Ecol.
, vol.76
, pp. 222-229
-
-
Sims, D.W.1
Righton, D.2
Pitchford, J.W.3
-
32
-
-
42949085864
-
On estimating the exponent of power-law frequency distributions
-
White, E. P., B. J. Enquist, and J. L. Green. 2008. On estimating the exponent of power-law frequency distributions. Ecology. 89:905-912.
-
(2008)
Ecology
, vol.89
, pp. 905-912
-
-
White, E.P.1
Enquist, B.J.2
Green, J.L.3
-
33
-
-
33746851316
-
Scale-free foraging by primates emerges from their interaction with a complex environment
-
Boyer, D., G. Ramos-Fernández, O. Miramontes, G. Cocho, H. Larralde, et al. 2006. Scale-free foraging by primates emerges from their interaction with a complex environment. Proc. R. Soc. Lond. B Biol. Sci. 273:1743-1750.
-
(2006)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.273
, pp. 1743-1750
-
-
Boyer, D.1
Ramos-Fernández, G.2
Miramontes, O.3
Cocho, G.4
Larralde, H.5
-
35
-
-
85031351200
-
-
Reference deleted in proof
-
Reference deleted in proof.
-
-
-
-
36
-
-
42149109049
-
Relationship between cellular response and behavioral variability in bacterial chemotaxis
-
Emonet, T., and P. Cluzel. 2008. Relationship between cellular response and behavioral variability in bacterial chemotaxis. Proc. Natl. Acad. Sci. USA. 105:3304-3309.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 3304-3309
-
-
Emonet, T.1
Cluzel, P.2
-
37
-
-
0034009901
-
An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells
-
DOI 10.1126/science.287.5458.1652
-
Cluzel, P., M. Surette, and S. Leibler. 2000. An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells. Science. 287:1652-1655. (Pubitemid 30127766)
-
(2000)
Science
, vol.287
, Issue.5458
, pp. 1652-1655
-
-
Cluzel, P.1
Surette, M.2
Leibler, S.3
-
38
-
-
0034015656
-
Real-time imaging of fluorescent flagellar filaments
-
DOI 10.1128/JB.182.10.2793-2801.2000
-
Turner, L., W. S. Ryu, and H. C. Berg. 2000. Real-time imaging of fluorescent flagellar filaments. J. Bacteriol. 182:2793-2801. (Pubitemid 30246910)
-
(2000)
Journal of Bacteriology
, vol.182
, Issue.10
, pp. 2793-2801
-
-
Turner, L.1
Ryu, W.S.2
Berg, H.C.3
-
39
-
-
20744434856
-
AgentCell: A digital single-cell assay for bacterial chemotaxis
-
DOI 10.1093/bioinformatics/bti391
-
Emonet, T., C. M. Macal, M. J. North, C. E. Wickersham, and P. Cluzel. 2005. AgentCell: a digital single-cell assay for bacterial chemotaxis. Bioinformatics. 21:2714-2721. (Pubitemid 40852319)
-
(2005)
Bioinformatics
, vol.21
, Issue.11
, pp. 2714-2721
-
-
Emonet, T.1
Macal, C.M.2
North, M.J.3
Wickersham, C.E.4
Cluzel, P.5
|