Multiplex binding modes of toluidine blue with calf thymus DNA and conformational transition of DNA revealed by spectroscopic studies

Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy

Volumn 74, Issue 2, 2009, Pages 421-426

  Wang, Juan ^a,b   Yang, Xiurong ^a  

^a CHANGCHUN INSTITUTE OF APPLIED CHEMISTRY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Conformational transition; DNA; Electrostatic interaction; Partial intercalation; Toluidine blue (TB)

Indexed keywords

ANTI-TUMOR ACTIVITIES; ANTITUMOR DRUGS; BASE STACKING; BINDING MODES; CALF THYMUS DNA; CALF THYMUS DNA (CT-DNA); CIRCULAR DICHROISM; CONFORMATIONAL TRANSITION; CONFORMATIONAL TRANSITIONS; ELECTRON TRANSFER; ELECTROSTATIC INTERACTION; ELECTROSTATIC INTERACTIONS; EXCITED SINGLET STATE; FLUORESCENCE QUENCHING; MELTING METHOD; PARTIAL INTERCALATION; SERS SPECTRUM; SPECTROSCOPIC STUDIES; THERMAL STABILITY; TOLUIDINE BLUE; TOLUIDINE BLUE (TB);

BINDING ENERGY; CIRCULAR DICHROISM SPECTROSCOPY; DICHROISM; DNA; DRUG INTERACTIONS; DRUG THERAPY; ELECTROSTATIC SEPARATORS; ELECTROSTATICS; FLUORESCENCE; GENES; NUCLEIC ACIDS; PHOTODYNAMIC THERAPY; QUENCHING; RAMAN SPECTROSCOPY; SPECTROSCOPIC ANALYSIS; THERMODYNAMIC STABILITY;

TERBIUM ALLOYS;

ANTINEOPLASTIC AGENT; CALF THYMUS DNA; DNA; TOLONIUM CHLORIDE;

ANIMAL; ARTICLE; BINDING SITE; CHEMICAL STRUCTURE; CONFORMATION; METABOLISM; SPECTROSCOPY;

ANIMALS; ANTINEOPLASTIC AGENTS; BINDING SITES; DNA; MOLECULAR STRUCTURE; NUCLEIC ACID CONFORMATION; SPECTRUM ANALYSIS; TOLONIUM CHLORIDE;

EID: 69249229791     PISSN: 13861425     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.saa.2009.06.038     Document Type: Article

References (46)

1. Palchaudhuri R., and Hergenrother P.J. Curr. Opin. Biotechnol. 18 (2007) 497-503
2. Ferguson L.R., and Denny W.A. Mutat. Res. 623 (2007) 14-23
3. Strekowski L., and Wilson B. Mutat. Res. 623 (2007) 3-13
4. Hurley L.H., and Boyd F.L. Trends Pharmacol. Sci. 9 (1988) 402-407
5. Tuite E.M., and Kelly J.M. J. Photoch. Photobio. B 21 (1993) 103-124
6. Dohno C., Stemp E.D.A., and Barton J.K. J. Am. Chem. Soc. 125 (2003) 9586-9587
7. Reid G.D., Whittaker D.J., Day M.A., Turton D.A., Kayser V., Kelly J.M., and Beddard G.S. J. Am. Chem. Soc. 124 (2002) 5518-5527
8. Kelly J.M., van der Putten W.J., and McConnell D.J. Photochem. Photobiol. 45 (1987) 167-175
9. Rohs R., Sklenar H., Lavery R., and Roder B. J. Am. Chem. Soc. 122 (2000) 2860-2866
10. Harris F., Chatfield L.K., and Phoenix D.A. Curr. Drug Target 6 (2005) 615-627
11. Tremblay J.F., Dussault S., Viau G., Gad F., Boushira M., and Bissonnette R. Photochem. Photobio. Sci. 1 (2002) 852-856
12. Chen L.H., Nie Y.T., Liu L.Z., and Shen H.X. Anal. Lett. 36 (2003) 107-122
13. Jiao K., Li Q.J., Sun W., and Wang Z.J. Electroanal. 17 (2005) 997-1002
14. Li N., Ma Y., Yang C., Guo L.P., and Yang X.R. Biophys. Chem. 116 (2005) 199-205
15. Kumar C.V., and Asuncion E.H. J. Am. Chem. Soc. 115 (1993) 8547-8553
16. Lee P.C., and Melsel D. J. Phys. Chem. 86 (1982) 3391-3395
17. Sanchez-Cortes S., Berenguel R.M., Madejon A., and Perez-Mendez M. Biomacromolecules 3 (2002) 655-660
18. Hughes M.E., Brandin E., and Golovchenko J.A. Nano Lett. 7 (2007) 1191-1194
19. Shelton A.H., Rodger A., and McMillin D.R. Biochemistry-us 46 (2007) 9143-9154
20. Becker H.C., and Norden B. J. Am. Chem. Soc. 121 (1999) 11947-11952
21. Mukundan N.E., Petho G., Dixon D.W., Kim M.S., and Marzilli L.G. Inorg. Chem. 33 (1994) 4676-4687
22. Pasternack R.F., Gibbs E.J., and Villafranca J.J. Biochemistry-us 22 (1983) 5409-5417
23. Carvlin M.J., and Fiel R.J. Nucleic Acids Res. 11 (1983) 6121-6139
24. Ford K.G., Pearl L.H., and Neidle S. Nucleic Acids Res. 15 (1987) 6553-6562
25. Dougherty G. J. Inorg. Biochem. 34 (1988) 95-103
26. Tuite E., and Kelly J.M. Biopolymers 35 (1995) 419-433
27. Babayan Y.S., and Manzini G. Molekulyarnaya Biologiya 24 (1990) 1084-1094
28. Kara P., Kerman K., Ozkan D., Meric B., Erdem A., Ozkan Z., and Ozsoz M. Electrochem. Commun. 4 (2002) 705-709
29. Krishna A.G., Kumar D.V., Khan B.M., Rawal S.K., and Ganesh K.N. Bba-gen. Subjects 1381 (1998) 104-112
30. Choudhury S.D., and Basu S. Spectrochim. Acta A 62 (2005) 736-739
31. Fujimoto B.S., Clendenning J.B., Delrow J.J., Heath P.J., and Schurr M. J. Phys. Chem. 98 (1994) 6633-6643
32. Hecht C., Friedrich J., and Chang T.C. J. Phys. Chem. B 108 (2004) 10241-10244
33. Zhong W.Y., Yu J.S., Huang W.L., Ni K.Y., and Liang Y.Q. Biopolymers 62 (2001) 315-323
34. Lyng R., Hard T., and Norden B. Biopolymers 26 (1987) 1327-1345
35. Jiang X., Shang L., Wang Z.X., and Dong S.J. Biophys. Chem. 118 (2005) 42-50
36. Wang Y., and Zhou A. J. Photoch. Photobio. A: Chem. 190 (2007) 121-127
37. Wang H.F., Yang P., Tian Y.N., Zhang Z.G., and Zhao C.G. J. Inorg. Biochem. 68 (1997) 117-121
38. Stellwagen N.C. Biochemistry-us 23 (1984) 6311-6319
39. Bolboaca M., Iliescu T., and Kiefer W. Chem. Phys. 298 (2004) 87-95
40. Xu W., Aydin M., Zakia S., and Akins D.L. J. Phys. Chem. B 108 (2004) 5588-5593
41. Nicolai S.H.D., Rodrigues P.R.P., Agostinho S.M.L., and Rubim J.C. J. Electroanal. Chem. 527 (2002) 103-111
42. Pan D.H., and Phillips D.L. J. Phys. Chem. A 103 (1999) 4737-4743
43. Nabiev I., Baranov A., Chourpa I., Beljebbar A., Sockalingum G.D., and Manfait M. J. Phys. Chem. 99 (1995) 1608-1613
44. Zimmermann F., Hossenfelder B., Panitz J.C., and Wokaun A. J. Phys. Chem. 98 (1994) 12796-12804
45. Nabiev I., Chourpa I., and Manfait M. J. Phys. Chem. 98 (1994) 1344-1350
46. Chen W., Turro C., Friedman L.A., Barton J.K., and Turro N.J. J. Phys. Chem. B 101 (1997) 6995-7000