-
1
-
-
0343459675
-
The program XEASY for computer-supported NMR spectral analysis of biological macromolecules
-
Bartels, C., T. H. Xia, M. Billeter, P. Guntert, and K. Wuhtrich. 1995. The program XEASY for computer-supported NMR spectral analysis of biological macromolecules. J. Biomol. NMR 6:1-10.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 1-10
-
-
Bartels, C.1
Xia, T.H.2
Billeter, M.3
Guntert, P.4
Wuhtrich, K.5
-
2
-
-
0022366770
-
Transcription termination and 3′ processing: The end is in site!
-
Birnstiel, M. L., M. Busslinger, and K. Strub. 1985. Transcription termination and 3′ processing: the end is in site! Cell 41:349-359.
-
(1985)
Cell
, vol.41
, pp. 349-359
-
-
Birnstiel, M.L.1
Busslinger, M.2
Strub, K.3
-
3
-
-
33947725274
-
Human papillomavirus (HPV) types 101 and 103 isolated from cervicovaginal cells lack an E6 open reading frame (ORF) and are related to gamma-papillomaviruses
-
DOI 10.1016/j.virol.2006.10.022, PII S0042682206007793
-
Chen, Z., M. Schiffman, R. Herrero, R. DeSalle, and R. D. Burk. 2007. Human papillomavirus (HPV) types 101 and 103 isolated from cervicovaginal cells lack an E6 open reading frame (ORF) and are related to gammapapillomaviruses. Virology 360:447-453. (Pubitemid 46505022)
-
(2007)
Virology
, vol.360
, Issue.2
, pp. 447-453
-
-
Chen, Z.1
Schiffman, M.2
Herrero, R.3
Desalle, R.4
Burk, R.D.5
-
4
-
-
0021118508
-
Principles that determine the structure of proteins
-
Chothia, C. 1984. Principles that determine the structure of proteins. Annu. Rev. Biochem. 53:537-572.
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 537-572
-
-
Chothia, C.1
-
5
-
-
0023116091
-
Nucleotide sequence and comparative analysis of the human papillomavirus type 18 genome. Phylogeny of papillomaviruses and repeated structure of the E6 and E7 gene products
-
Cole, S. T., and O. Danos. 1987. Nucleotide sequence and comparative analysis of the human papillomavirus type 18 genome. Phylogeny of papillomaviruses and repeated structure of the E6 and E7 gene products. J. Mol. Biol. 193:599-608.
-
(1987)
J. Mol. Biol.
, vol.193
, pp. 599-608
-
-
Cole, S.T.1
Danos, O.2
-
6
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer, and A. Bax. 1995. NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6:277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
7
-
-
2942567871
-
Classification of papillomaviruses
-
de Villiers, E. M., C. Fauquet, T. R. Broker, H. U. Bernard, and H. zur Hausen. 2004. Classification of papillomaviruses. Virology 324:17-27.
-
(2004)
Virology
, vol.324
, pp. 17-27
-
-
De Villiers, E.M.1
Fauquet, C.2
Broker, T.R.3
Bernard, H.U.4
Zur Hausen, H.5
-
8
-
-
24044538903
-
IUPred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
-
DOI 10.1093/bioinformatics/bti541
-
Dosztanyi, Z., V. Csizmok, P. Tompa, and I. Simon. 2005. IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics 21:3433-3434. (Pubitemid 41222453)
-
(2005)
Bioinformatics
, vol.21
, Issue.16
, pp. 3433-3434
-
-
Dosztanyi, Z.1
Csizmok, V.2
Tompa, P.3
Simon, I.4
-
9
-
-
13244255415
-
MUSCLE: A multiple sequence alignment method with reduced time and space complexity
-
Edgar, R. C. 2004. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5:113.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
10
-
-
33644876020
-
Pfam: Clans, web tools and services
-
Finn, R. D., J. Mistry, B. Schuster-Bockler, S. Griffiths-Jones, V. Hollich, T. Lassmann, S. Moxon, M. Marshall, A. Khanna, R. Durbin, S. R. Eddy, E. L. Sonnhammer, and A. Bateman. 2006. Pfam: clans, web tools and services. Nucleic Acids Res. 34:D247-D251.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Finn, R.D.1
Mistry, J.2
Schuster-Bockler, B.3
Griffiths-Jones, S.4
Hollich, V.5
Lassmann, T.6
Moxon, S.7
Marshall, M.8
Khanna, A.9
Durbin, R.10
Eddy, S.R.11
Sonnhammer, E.L.12
Bateman, A.13
-
11
-
-
27144493802
-
Papillomaviruses: Different genes have different histories
-
DOI 10.1016/j.tim.2005.09.003, PII S0966842X05002519
-
Garcia-Vallve, S., A. Alonso, and I. G. Bravo. 2005. Papillomaviruses: different genes have different histories. Trends Microbiol. 13:514-521. (Pubitemid 41506892)
-
(2005)
Trends in Microbiology
, vol.13
, Issue.11
, pp. 514-521
-
-
Garcia-Vallve, S.1
Alonso, A.2
Bravo, I.G.3
-
12
-
-
0024380768
-
E6 protein of human papillomavirus type 18 binds zinc
-
Grossman, S. R., and L. A. Laimins. 1989. E6 protein of human papillomavirus type 18 binds zinc. Oncogene 4:1089-1093. (Pubitemid 19211723)
-
(1989)
Oncogene
, vol.4
, Issue.9
, pp. 1089-1093
-
-
Grossman, S.R.1
Laimins, L.A.2
-
13
-
-
0034578389
-
Aggresomes, inclusion bodies and protein aggregation
-
Kopito, R. R. 2000. Aggresomes, inclusion bodies and protein aggregation. Trends Cell Biol. 10:524-530.
-
(2000)
Trends Cell Biol.
, vol.10
, pp. 524-530
-
-
Kopito, R.R.1
-
14
-
-
20144388587
-
Binding of human papillomavirus 16 E6 to p53 and E6AP is impaired by monoclonal antibodies directed against the second zinc-binding domain of E6
-
Lagrange, M., S. Charbonnier, G. Orfanoudakis, P. Robinson, K. Zanier, M. Masson, Y. Lutz, G. Trave, E. Weiss, and F. Deryckere. 2005. Binding of human papillomavirus 16 E6 to p53 and E6AP is impaired by monoclonal antibodies directed against the second zinc-binding domain of E6. J. Gen. Virol. 86:1001-1007.
-
(2005)
J. Gen. Virol.
, vol.86
, pp. 1001-1007
-
-
Lagrange, M.1
Charbonnier, S.2
Orfanoudakis, G.3
Robinson, P.4
Zanier, K.5
Masson, M.6
Lutz, Y.7
Trave, G.8
Weiss, E.9
Deryckere, F.10
-
15
-
-
0002498995
-
Analytical ultracentrifugation
-
S. E. Harding, A. J. Rowe, and J. C. Horton (ed.), The Royal Society of Chemistry, Cambridge, United Kingdom
-
Laue, T. M., B. D. Shah, T. M. Ridgeway, and S. L. Pelletier. 1992. Analytical ultracentrifugation, p. 90-125. In S. E. Harding, A. J. Rowe, and J. C. Horton (ed.), Biochemistry and polymer science. The Royal Society of Chemistry, Cambridge, United Kingdom.
-
(1992)
Biochemistry and Polymer Science
, pp. 90-125
-
-
Laue, T.M.1
Shah, B.D.2
Ridgeway, T.M.3
Pelletier, S.L.4
-
16
-
-
33644877451
-
SMART 5: Domains in the context of genomes and networks
-
Letunic, I., R. R. Copley, B. Pils, S. Pinkert, J. Schultz, and P. Bork. 2006. SMART 5: domains in the context of genomes and networks. Nucleic Acids Res. 34:D257-D260.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Letunic, I.1
Copley, R.R.2
Pils, B.3
Pinkert, S.4
Schultz, J.5
Bork, P.6
-
17
-
-
0042622240
-
GlobPlot: Exploring protein sequences for globularity and disorder
-
DOI 10.1093/nar/gkg519
-
Linding, R., R. B. Russell, V. Neduva, and T. J. Gibson. 2003. GlobPlot: exploring protein sequences for globularity and disorder. Nucleic Acids Res. 31:3701-3708. (Pubitemid 37442227)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3701-3708
-
-
Linding, R.1
Russell, R.B.2
Neduva, V.3
Gibson, T.J.4
-
18
-
-
33644858296
-
Structure of the human papillomavirus E7 oncoprotein and its mechanism for inactivation of the retinoblastoma tumor suppressor
-
Liu, X., A. Clements, K. Zhao, and R. Marmorstein. 2006. Structure of the human papillomavirus E7 oncoprotein and its mechanism for inactivation of the retinoblastoma tumor suppressor. J. Biol. Chem. 281:578-586.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 578-586
-
-
Liu, X.1
Clements, A.2
Zhao, K.3
Marmorstein, R.4
-
19
-
-
33747881589
-
HPV in the etiology of human cancer
-
Munoz, N., X. Castellsague, A. B. de Gonzalez, and L. Gissmann. 2006. HPV in the etiology of human cancer. Vaccine 24(Suppl. 3):S1-S10.
-
(2006)
Vaccine
, vol.24
, Issue.SUPPL. 3
-
-
Munoz, N.1
Castellsague, X.2
De Gonzalez, A.B.3
Gissmann, L.4
-
20
-
-
0033504552
-
The parsimony ratchet, a new method for rapid parsimony analysis
-
DOI 10.1006/clad.1999.0121
-
Nixon, K. C. 1999. The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics 15:407-414. (Pubitemid 30203167)
-
(1999)
Cladistics
, vol.15
, Issue.4
, pp. 407-414
-
-
Nixon, K.C.1
-
21
-
-
15844368456
-
15N resonance assignment, secondary structure and dynamic behaviour of the C-terminal domain of human papillomavirus oncoprotein E6
-
DOI 10.1007/s10858-004-7802-y
-
Nomine, Y., S. Charbonnier, L. Miguet, N. Potier, D. A. Van, R. A. Atkinson, G. Trave, and B. Kieffer. 2005. 1H and 15N resonance assignment, secondary structure and dynamic behaviour of the C-terminal domain of human papillomavirus oncoprotein E6. J. Biomol. NMR 31:129-141. (Pubitemid 40425220)
-
(2005)
Journal of Biomolecular NMR
, vol.31
, Issue.2
, pp. 129-141
-
-
Nomine, Y.1
Charbonnier, S.2
Miguet, L.3
Potier, N.4
Van Dorsselaer, A.5
Atkinson, R.A.6
Trave, G.7
Kieffer, B.8
-
22
-
-
0038333394
-
Domain substructure of HPV E6 oncoprotein: Biophysical characterization of the E6 C-terminal DNA-binding domain
-
DOI 10.1021/bi026980c
-
Nomine, Y., S. Charbonnier, T. Ristriani, G. Stier, M. Masson, N. Cavusoglu, A. Van Dorsselaer, E. Weiss, B. Kieffer, and G. Trave. 2003. Domain substructure of HPV E6 oncoprotein: biophysical characterization of the E6 C-terminal DNA-binding domain. Biochemistry 42:4909-4917. (Pubitemid 36532043)
-
(2003)
Biochemistry
, vol.42
, Issue.17
, pp. 4909-4917
-
-
Nomine, Y.1
Charbonnier, S.2
Ristriani, T.3
Stier, G.4
Masson, M.5
Cavusoglu, N.6
Van Dorsselaer, A.7
Weiss, E.8
Kieffer, B.9
Trave, G.10
-
23
-
-
33344455029
-
Structural and functional analysis of E6 oncoprotein: Insights in the molecular pathways of human papillomavirus-mediated pathogenesis
-
DOI 10.1016/j.molcel.2006.01.024, PII S1097276506000463
-
Nomine, Y., M. Masson, S. Charbonnier, K. Zanier, T. Ristriani, F. Deryckere, A. P. Sibler, D. Desplancq, R. A. Atkinson, E. Weiss, G. Orfanoudakis, B. Kieffer, and G. Trave. 2006. Structural and functional analysis of E6 oncoprotein: insights in the molecular pathways of human papillomavirus-mediated pathogenesis. Mol. Cell 21:665-678. (Pubitemid 43290733)
-
(2006)
Molecular Cell
, vol.21
, Issue.5
, pp. 665-678
-
-
Nomine, Y.1
Masson, M.2
Charbonnier, S.3
Zanier, K.4
Ristriani, T.5
Deryckere, F.6
Sibler, A.-P.7
Desplancq, D.8
Atkinson, R.A.9
Weiss, E.10
Orfanoudakis, G.11
Kieffer, B.12
Trave, G.13
-
24
-
-
0034816105
-
Formation of soluble inclusion bodies by hpv e6 oncoprotein fused to maltose-binding protein
-
Nomine, Y., T. Ristriani, C. Laurent, J. F. Lefevre, E. Weiss, and G. Trave. 2001. Formation of soluble inclusion bodies by hpv e6 oncoprotein fused to maltose-binding protein. Protein Expr. Purif. 23:22-32.
-
(2001)
Protein Expr. Purif.
, vol.23
, pp. 22-32
-
-
Nomine, Y.1
Ristriani, T.2
Laurent, C.3
Lefevre, J.F.4
Weiss, E.5
Trave, G.6
-
25
-
-
33747153263
-
Solution structure of the partially folded high-risk human papilloma virus 45 oncoprotein E7
-
DOI 10.1038/sj.onc.1209584, PII 1209584
-
Ohlenschlager, O., T. Seiboth, H. Zengerling, L. Briese, A. Marchanka, R. Ramachandran, M. Baum, M. Korbas, W. Meyer-Klaucke, M. Durst, and M. Gorlach. 2006. Solution structure of the partially folded high-risk human papilloma virus 45 oncoprotein E7. Oncogene 25:5953-5959. (Pubitemid 44477289)
-
(2006)
Oncogene
, vol.25
, Issue.44
, pp. 5953-5959
-
-
Ohlenschlager, O.1
Seiboth, T.2
Zengerling, H.3
Briese, L.4
Marchanka, A.5
Ramachandran, R.6
Baum, M.7
Korbas, M.8
Meyer-Klaucke, W.9
Durst, M.10
Gorlach, M.11
-
26
-
-
0026951903
-
Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
-
Piotto, M., V. Saudek, and V. Sklenar. 1992. Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J. Biomol. NMR 2:661-665.
-
(1992)
J. Biomol. NMR
, vol.2
, pp. 661-665
-
-
Piotto, M.1
Saudek, V.2
Sklenar, V.3
-
27
-
-
0024290488
-
Helix signals in proteins
-
Presta, L. G., and G. D. Rose. 1988. Helix signals in proteins. Science 240:1632-1641.
-
(1988)
Science
, vol.240
, pp. 1632-1641
-
-
Presta, L.G.1
Rose, G.D.2
-
28
-
-
35748950731
-
Ancient papillomavirus-host co-speciation in Felidae
-
Rector, A., P. Lemey, R. Tachezy, S. Mostmans, S. J. Ghim, D. K. Van, M. Roelke, M. Bush, R. J. Montali, J. Joslin, R. D. Burk, A. B. Jenson, J. P. Sundberg, B. Shapiro, and R. M. Van. 2007. Ancient papillomavirus-host co-speciation in Felidae. Genome Biol. 8:R57.
-
(2007)
Genome Biol.
, vol.8
-
-
Rector, A.1
Lemey, P.2
Tachezy, R.3
Mostmans, S.4
Ghim, S.J.5
Van K, D.6
Roelke, M.7
Bush, M.8
Montali, R.J.9
Joslin, J.10
Burk, R.D.11
Jenson, A.B.12
Sundberg, J.P.13
Shapiro, B.14
Van, R.M.15
-
29
-
-
2342599124
-
A Sequence-Independent Strategy for Detection and Cloning of Circular DNA Virus Genomes by Using Multiply Primed Rolling-Circle Amplification
-
DOI 10.1128/JVI.78.10.4993-4998.2004
-
Rector, A., R. Tachezy, and M. Van Ranst. 2004. A sequence-independent strategy for detection and cloning of circular DNA virus genomes by using multiply primed rolling-circle amplification. J. Virol. 78:4993-4998. (Pubitemid 38581449)
-
(2004)
Journal of Virology
, vol.78
, Issue.10
, pp. 4993-4998
-
-
Rector, A.1
Tachezy, R.2
Van Ranst, M.3
-
30
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
-
Schuck, P. 2000. Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling. Biophys. J. 78:1606-1619. (Pubitemid 30141584)
-
(2000)
Biophysical Journal
, vol.78
, Issue.3
, pp. 1606-1619
-
-
Schuck, P.1
-
31
-
-
0021986880
-
Structure and transcription of human papillomavirus sequences in cervical carcinoma cells
-
Schwarz, E., U. K. Freese, L. Gissmann, W. Mayer, B. Roggenbuck, A. Stremlau, and H. zur Hausen. 1985. Structure and transcription of human papillomavirus sequences in cervical carcinoma cells. Nature 314:111-114.
-
(1985)
Nature
, vol.314
, pp. 111-114
-
-
Schwarz, E.1
Freese, U.K.2
Gissmann, L.3
Mayer, W.4
Roggenbuck, B.5
Stremlau, A.6
Zur Hausen, H.7
-
32
-
-
0037621982
-
Nucleocytoplasmic shuttling of antigen in mammalian cells conferred by a soluble versus insoluble single-chain antibody fragment equipped with import/export signals
-
Sibler, A. P., A. Nordhammer, M. Masson, P. Martineau, G. Trave, and E. Weiss. 2003. Nucleocytoplasmic shuttling of antigen in mammalian cells conferred by a soluble versus insoluble single-chain antibody fragment equipped with import/export signals. Exp. Cell Res. 286:276-287.
-
(2003)
Exp. Cell Res.
, vol.286
, pp. 276-287
-
-
Sibler, A.P.1
Nordhammer, A.2
Masson, M.3
Martineau, P.4
Trave, G.5
Weiss, E.6
-
33
-
-
0011773511
-
-
Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs
-
Sikes, D. S., and P. O. Lewis. 2001. PAUPRat: PAUP* implementation of the parsimony ratchet. Beta software, version 1. Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs.
-
(2001)
PAUPRat: PAUP* Implementation of the Parsimony Ratchet. Beta Software, Version 1
-
-
Sikes, D.S.1
Lewis, P.O.2
-
34
-
-
0001913322
-
The nonhuman (animal) papillomaviruses: Host range, epitope conservation, and molecular diversity
-
G. von Krogh and G. Gross (ed.), CRC Press, Boca Raton, FL
-
Sundberg, J. P., M. Van Ranst, R. D. Burk, and A. B. Jenson. 1997. The nonhuman (animal) papillomaviruses: host range, epitope conservation, and molecular diversity, p. 47-68. In G. von Krogh and G. Gross (ed.), Human papillomavirus infections in dermatovenereology. CRC Press, Boca Raton, FL.
-
(1997)
Human Papillomavirus Infections in Dermatovenereology
, pp. 47-68
-
-
Sundberg, J.P.1
Van Ranst, M.2
Burk, R.D.3
Jenson, A.B.4
-
35
-
-
21444441725
-
Papillomavirus infections
-
E. S. Williams and I. K. Barker (ed.), Iowa State University Press, Ames
-
Sundberg, J. P., M. Van Ranst, and A. B. Jenson. 2001. Papillomavirus infections, p. 223-231. In E. S. Williams and I. K. Barker (ed.), Infectious diseases of wild mammals. Iowa State University Press, Ames.
-
(2001)
Infectious Diseases of Wild Mammals
, pp. 223-231
-
-
Sundberg, J.P.1
Van Ranst, M.2
Jenson, A.B.3
-
37
-
-
19044375273
-
Avian papillomaviruses: The parrot Psittacus erithacus papillomavirus (PePV) genome has a unique organization of the early protein region and is phylogenetically related to the chaffinch papillomavirus
-
DOI 10.1186/1471-2180-2-1, 1
-
Tachezy, R., A. Rector, M. Havelkova, E. Wollants, P. Fiten, G. Opdenakker, B. Jenson, J. Sundberg, and M. Van Ranst. 2002. Avian papillomaviruses: the parrot Psittacus erithacus papillomavirus (PePV) genome has a unique organization of the early protein region and is phylogenetically related to the chaffinch papillomavirus. BMC Microbiol. 2:19-27. (Pubitemid 38994382)
-
(2002)
BMC Microbiology
, vol.2
, pp. 1-9
-
-
Tachezy, R.1
Rector, A.2
Havelkova, M.3
Wollants, E.4
Fiten, P.5
Opdenakker, G.6
Jenson, A.B.7
Sundberg, J.P.8
Van Ranst, M.9
-
38
-
-
0036776446
-
Lack of canonical E6 and E7 open reading frames in bird papillomaviruses: Fringilla coelebs papillomavirus and Psittacus erithacus timneh papillomavirus
-
Terai, M., R. DeSalle, and R. D. Burk. 2002. Lack of canonical E6 and E7 open reading frames in bird papillomaviruses: Fringilla coelebs papillomavirus and Psittacus erithacus timneh papillomavirus. J. Virol. 76:10020-10023.
-
(2002)
J. Virol.
, vol.76
, pp. 10020-10023
-
-
Terai, M.1
Desalle, R.2
Burk, R.D.3
-
39
-
-
33646046480
-
Genetic characterization of the Capra hircus papillomavirus: A novel close-to-root artiodactyl papillomavirus
-
Van Doorslaer, K., A. Rector, P. Vos, and M. Van Ranst. 2006. Genetic characterization of the Capra hircus papillomavirus: a novel close-to-root artiodactyl papillomavirus. Virus Res. 118:164-169.
-
(2006)
Virus Res.
, vol.118
, pp. 164-169
-
-
Van Doorslaer, K.1
Rector, A.2
Vos, P.3
Van Ranst, M.4
-
40
-
-
0025609563
-
Parameter relation rows: A query system for protein structure function relationships
-
Vriend, G. 1990. Parameter relation rows: a query system for protein structure function relationships. Protein Eng. 4:221-223.
-
(1990)
Protein Eng.
, vol.4
, pp. 221-223
-
-
Vriend, G.1
-
41
-
-
34247257349
-
Formation of well-defined soluble aggregates upon fusion to MBP is a generic property of E6 proteins from various human papillomavirus species
-
Zanier, K., Y. Nomine, S. Charbonnier, C. Ruhlmann, P. Schultz, J. Schweizer, and G. Trave. 2007. Formation of well-defined soluble aggregates upon fusion to MBP is a generic property of E6 proteins from various human papillomavirus species. Protein Expr. Purif. 51:59-70.
-
(2007)
Protein Expr. Purif.
, vol.51
, pp. 59-70
-
-
Zanier, K.1
Nomine, Y.2
Charbonnier, S.3
Ruhlmann, C.4
Schultz, P.5
Schweizer, J.6
Trave, G.7
|