Absence of intervening sequences (IVSs) in helix 11 region within 16S rRNA genes among more than 240 isolates of the seven Campylobacter species

British Journal of Biomedical Science

Volumn 66, Issue 2, 2009, Pages 103-106

  Sekizuka, A ^a   Tazumi, A ^a   Nakanishi, S ^a   Meguro, S ^a   Kakinuma, Y ^a   Misawa, N ^b   Moore, J E ^c   Millar, B C ^c   Matsuda, Motoo ^a  

^a AZABU UNIVERSITY   (Japan)

^b UNIVERSITY OF MIYAZAKI   (Japan)

^c BELFAST CITY HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; RIBOSOME RNA;

ARTICLE; CAMPYLOBACTER COLI; CAMPYLOBACTER JEJUNI; CAMPYLOBACTER SPUTORUM; DIARRHEA; GENE SEQUENCE; INTRON; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL;

CAMPYLOBACTER;

BASE SEQUENCE; CAMPYLOBACTER; HUMANS; INTRONS; MOLECULAR SEQUENCE DATA; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ALIGNMENT;

EID: 69249182127     PISSN: 09674845     EISSN: None     Source Type: Journal    
DOI: 10.1080/09674845.2009.11978147     Document Type: Article

References (10)

1. Fouts D, Mongodin EF, Mandrell RE et al. Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. PLoS Biol 2005; 3: e15 (Epub 4 jan 2005). (Pubitemid 40318109)
2. Moore JE, Corcoran D, Dooley JS et al. Campylobacter. Vet Res 2005; 36: 351-382
3. van Camp G, van de Peer Y, Nicolai S et al. Structure of 16S and 23S ribosomal RNA genes in Campylobacter species: phylogenetic analysis of the genus Campylobacter and presence of internal transcribed spacers. Syst Appl Microbiol 1993; 16: 361-368 (Pubitemid 24010285)
4. Linton D, Dewhirst FE, Clewley JP, Owen RJ, Burnens AP, Stanley J. Two types of 16S rRNA gene are found in Campylobacter helveticus: analysis, applications and characterization of the intervening sequence found in some strains. Microbiology 1994; 140: 847-855 (Pubitemid 24124656)
5. Etoh Y, Yamamoto A, Goto N. Intervening sequences in 16S rRNA genes of Campylobacter sp.: diversity of nucleotide sequences and uniformity of location. Microbiol Immunol 1998; 42: 241-243
6. Sambrook J, Russell DW. Molecular cloning. A laboratory manual 3rd edn. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press, 2001.
7. Miyajima M, Matsuda M, Haga S, Kagawa S, Millar BC, Moore JE. Cloning and sequencing of 16S rDNA and 16S-23S rDNA internal spacer region (ISR) from urease-positive thermophilic Campylobacter (UPTC). Lett Appl Microbiol 2002; 34: 287-289
8. Thompson JD, Higgins DG, Gibson TJ. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight choice. Nucleic Acid Res 1994; 22: 4673-4680
9. Mitsuhashi N, Matsuda M, Murayama O, Millar BC, Moore JE. Sequencing and analysis of the 16S rDNA of thermophilic Campylobacter lari and their reliability for molecular discrimination. Br J Biomed Sci 2005; 62: 34-36 (Pubitemid 40477529)
10. Harrington C, On SLW. Extensive 16S rRNA gene sequence diversity in Campylobacter hyointestinalis strains: taxonomic and applied implications. J Syst Bacteriol 1999; 49: 1171-1175