Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa: Aves)

Molecular Ecology Resources

Volumn 9, Issue 5, 2009, Pages 1415-1418

  Verkuil, Yvonne I ^a,b   Trimbos, Krijn ^c   Haddrath, Oliver ^b   Baker, Allan J ^b,d   Piersma, Theunis ^a,e  

^a UNIVERSITY OF GRONINGEN   (Netherlands)

^b DEPARTMENT OF NATURAL HISTORY   (Canada)

^c LEIDEN UNIVERSITY   (Netherlands)

^d UNIVERSITY OF TORONTO   (Canada)

^e ROYAL NETHERLANDS INSTITUTE FOR SEA RESEARCH   (Netherlands)

Author keywords

Black tailed godwit; Ground nesting shorebird; Limosa limosa; Microsatellite; Population genetics

Indexed keywords

AVES; LIMOSA LAPPONICA; LIMOSA LIMOSA; LIMOSA LIMOSA LIMOSA;

EID: 68949102016     PISSN: 1755098X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1755-0998.2009.02685.x     Document Type: Article

References (14)

1. BirdLife International (2008) Black-tailed Godwit - Birdlife Species Factsheet. Available from http://www.birdlife.org/datazone/species/index.html? action=SpcHTMDetails.asp&sid=3003&m=0.
2. Excoffier LGL, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online, 1, 47 50.
3. Fridolfsson AK, Ellegren H (1999) A simple and universal method for molecular sexing of non-ratite birds. Journal of Avian Biology, 30, 116 121.
4. Goudet J (2001) fstat, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Available from http://www2.unil.ch/popgen/ softwares/fstat.htm
5. Hamilton MB, Pincus EL, Di Fiore A, Fleischer RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. BioTechniques, 27, 500 507.
6. Höglund J, Johansson T, Beintema AJ, Schekkerman H (2009) Phylogeography of the Black-tailed Godwit Limosa limosa: substructuring revealed by mtDNA control region sequences. Journal of Ornithology, 150, 45 53.
7. IUCN 2008. IUCN Red List of Threatened Species. Available from http://www.iucnredlist.org/details/143984.
8. Kalendar R (2009) FastPCR software for PCR primer and probe design and repeat search. Available from http://www.biocenter.helsinki.fi/bi/programs/ fastpcr.htm
9. Kentie R, Hooijmeijer J, Both C, Piersma T (2008) Grutto's in ruimte en tijd. Rapport DK nr 2008/097. Directie Kennis, Ministerie van Landbouw, Natuur en Voedselkwaliteit. Ede, The Netherlands.
10. Kumar S, Tamura K, Nei M (2004) mega3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics, 5, 150 163.
11. Raymond M, Rousset F (1995) genepop (version 1.2): population genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248 249.
12. Rice WR (1989) Analyzing tables of statistical tests. Evolution, 43, 223 225.
13. Rozen S, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. In : Bioinformatics Methods and Protocols: Methods in Molecular Biology (eds Krawetz S, Misener S pp. 365 386. Humana Press, Totowa, NJ.
14. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes, 4, 535 538.