Membrane-mediated repulsion between gramicidin pores

Biochimica et Biophysica Acta - Biomembranes

Volumn 1788, Issue 9, 2009, Pages 1782-1789

  Constantin, Doru ^a  

^a UNIVERSITÉ PARIS SUD   (France)

Author keywords

Gramicidin; Hydrophobic mismatch; In plane interaction; Small angle X ray scattering

Indexed keywords

DILAUROYLPHOSPHATIDYLCHOLINE; GRAMICIDIN D;

ARTICLE; CONTROLLED STUDY; DILUTION; DRUG STRUCTURE; HYDROPHOBICITY; LIPID BILAYER; PRIORITY JOURNAL; X RAY CRYSTALLOGRAPHY;

COMPUTER SIMULATION; GRAMICIDIN; HYDROPHOBICITY; LIPID BILAYERS; MODELS, CHEMICAL; PHOSPHATIDYLCHOLINES; SCATTERING, SMALL ANGLE; X-RAY DIFFRACTION;

EID: 68849091381     PISSN: 00052736     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbamem.2009.05.007     Document Type: Article

References (42)

1. Singer S.J., and Nicolson G.L. The fluid mosaic model of the structure of cell membranes. Science 175 (1972) 720-731
2. Sackmann E. Physical basis for trigger processes and membrane structures. In: Chapman D. (Ed). Biological Membranes Vol. 5 (1984), Academic Press, London 105-143
3. Bretscher M.S., and Munro S. Cholesterol and the Golgi apparatus. Science 261 (1993) 1280-1281
4. Simons K., and Ikonen E. Functional rafts in cell membranes. Nature 387 (1997) 569-572
5. Simons K., and Toomre D. Lipid rafts and signal transduction. Nat. Rev. Molec. Cell Biol. 1 (2000) 31-39
6. Jensen M.Ø., and Mouritsen O.G. Lipids do influence protein function-the hydrophobic matching hypothesis revisited. Biochim. Biophys. Acta-Biomembranes 1666 (2004) 205-226
7. Sperotto M.M., May S., and Baumgaertner A. Modelling of proteins in membranes. Chem. Phys. Lipids 141 (2006) 2-29
8. Lewis B.A., and Engelman D.M. Bacteriorhodopsin remains dispersed in fluid phospholipid bilayers over a wide range of bilayer thicknesses. J. Mol. Biol. 166 (1983) 203-210
9. Chen Y.S., and Hubbell W.L. Temperature- and light-dependent structural changes in rhodopsin-lipid membranes. Exp. Eye Res. 17 (1973) 517-532
10. James R., and Branton D. Lipid- and temperature-dependent structural changes in Acholeplasma laidlawii cell membranes. Biochim. Biophys. Acta 323 (1973) 378-390
11. Abney J.R., Braun J., and Owicki J.C. Lateral interactions among membrane proteins: implications for the organization of gap junctions. Biophys. J. 52 (1987) 441-454
12. Pearson L.T., Lewis B.A., Engelman D.M., and Chan S.I. Pair distribution functions of bacteriorhodopsin and rhodopsin in model bilayers. Biophys. J. 43 (1983) 167-174
13. Pearson L.T., Edelman J., and Chan S.I. Statistical mechanics of lipid membranes, protein correlation functions and lipid ordering. Biophys. J. 45 (1984) 863-871
14. Braun J., Abney J.R., and Owicki J.C. Lateral interactions among membrane proteins: valid estimates based on freeze-fracture electron microscopy. Biophys. J. 52 (1987) 427-439
15. He K., Ludtke S.J., Huang H.W., and Worcester D.L. Antimicrobial peptide pores in membranes detected by neutron in-plane scattering. Biochemistry 34 (1995) 15614-15618
16. He K., Ludtke S.J., Worcester D.L., and Huang H.W. Neutron scattering in the plane of the membranes: structure of alamethicin pores. Biophys. J. 70 (1996) 2659-2666
17. Yang L., Weiss T., Harroun T., Heller W., and Huang H. Supramolecular structures of peptide assemblies in membranes by neutron off-plane scattering: method of analysis. Biophys. J. 77 (1999) 2648-2656
18. Constantin D., Brotons G., Jarre A., Li C., and Salditt T. Interaction of alamethicin pores in DMPC bilayers. Biophys. J. 92 (2007) 3978-3987
19. Constantin D., Pansu B., Impéror M., Davidson P., and Ribot F. Repulsion between inorganic particles inserted within surfactant bilayers. Phys. Rev. Lett. 101 (2008) 098101
20. Simon J.P., Arnaud S., Bley F., Berar J.F., Caillot B., Comparat V., Geissler E., de Geyer A., Jeantey P., Livet F., and Okuda H. A new small-angle X-ray scattering instrument on the French CRG beamline at the ESRF multiwavelength anomalous scattering/diffraction beamline (D2AM). J. Appl. Cryst. 30 (1997) 900-904
21. Chaikin P.M., and Lubensky T.C. Principles of Condensed Matter Physics (1995), Cambridge University Press, Cambridge
22. de Groot B.L., Tieleman D.P., Pohl P., and Grubmüller H. Water permeation through gramicidin A: desformylation and the double helix: a molecular dynamics study. Biophys. J. 82 (2002) 2934-2942
23. Harroun T.A., Heller W.T., Weiss T.M., Yang L., and Huang H.W. Experimental evidence for hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin. Biophys. J. 76 (1999) 937-945
24. Woolf T.B., and Roux B. Structure, energetics, and dynamics of lipid-protein interactions: a molecular dynamics study of the gramicidin a channel in a dmpc bilayer. Proteins 24 (1996) 92-114
25. Rosenfeld Y. Free-energy model for the inhomogeneous hard-sphere fluid in d dimensions: structure factors for the hard-disk (d = 2) mixtures in simple explicit form. Phys. Rev. A 42 (1990) 5978-5988
26. Lado F. Pressure-consistent integral equation for classical fluids: hard-sphere solutions. J. Chem. Phys. 47 (1967) 4828-4833
27. Lado F. Equation of state of the hard-disk fluid from approximate integral equations. J. Chem. Phys. 49 (1968) 3092-3096
28. Mouritsen O.G., and Bloom M. Mattress model of lipid-protein interactions in membranes. Biophys. J. 46 (1984) 141-153
29. Killian J. Hydrophobic mismatch between proteins and lipids in membranes. Biochim. Biophys. Acta 1376 (1998) 401-416
30. Elliott J.R., Needham D., Dilger J.P., and Haydon D.A. The effects of bilayer thickness and tension on gramicidin single-channel lifetime. Biochim. Biophys. Acta 735 (1983) 95-103
31. Orädd G., Lindblom G., Arvidson G., and Gunnarsson K. Phase equilibria and molecular packing in the N,N-dimethyidodecylamine oxide/gramicidin D/water system studied by 2H nuclear magnetic resonance spectroscopy. Biophys. J. 68 (1995) 547-557
32. Aranda-Espinoza H., Berman A., Dan N., Pincus P., and Safran S. Interaction between inclusions embedded in membranes. Biophys. J. 71 (1996) 648-656
33. Bohinc K., Kralj-Iglič V., and May S. Interaction between two cylindrical inclusions in a symmetric lipid bilayer. J. Chem. Phys. 119 (2003) 7435-7444
34. Huang H.W. Deformation free energy of bilayer membrane and its effect on gramicidin channel lifetime. Biophys. J. 50 (1986) 1061-1070
35. Marčelja S. Lipid-mediated protein interaction in membranes. Biochim. Biophys. Acta 455 (1976) 1-7
36. Sintes T., and Baumgärtner A. Protein attraction in membranes induced by lipid fluctuations. Biophys. J. 73 (1997) 2251-2259
37. Lagüe P., Zuckermann M.J., and Roux B. Lipid-mediated interactions between intrinsic membrane proteins: a theoretical study based on integral equations. Biophys. J. 79 (2000) 2867-2879
38. May S., and Ben-Shaul A. A molecular model for lipid-mediated interaction between proteins in membranes. Phys. Chem. Chem. Phys. 2 (2000) 4494-4502
39. Lagüe P., Zuckermann M.J., and Roux B. Lipid-mediated interactions between intrinsic membrane proteins: dependence on protein size and lipid composition. Biophys. J. 81 (2001) 276-284
40. Harroun T.A., Heller W.T., Weiss T.M., Yang L., and Huang H.W. Theoretical analysis of hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin. Biophys. J. 76 (1999) 3176-3185
41. Fattal D.R., and Ben-Shaul A. A molecular model for lipid-protein interaction in membranes: the role of hydrophobic mismatch. Biophys. J. 65 (1993) 1795-1809
42. Dan N., Pincus P., and Safran S. Membrane-induced interactions between inclusions. Langmuir 9 (1993) 2768-2771