메뉴 건너뛰기




Volumn 56, Issue 1, 2009, Pages 13-23

Temporal variability in the abundance of ammonia-oxidizing bacteria vs. archaea in sandy sediments of the Douro River estuary, Portugal

Author keywords

Ammonia oxidation; Archaea; Bacteria; Nitrification; Sandy sediments

Indexed keywords

ARCHAEA; BACTERIA (MICROORGANISMS); BETAPROTEOBACTERIA; NITROSOMONADALES;

EID: 68849089454     PISSN: 09483055     EISSN: None     Source Type: Journal    
DOI: 10.3354/ame01313     Document Type: Article
Times cited : (50)

References (63)
  • 2
    • 57649114800 scopus 로고    scopus 로고
    • Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
    • Agogué H, Brink M, Dinasquet J, Herndl GJ(2008) Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456:788-791
    • (2008) Nature , vol.456 , pp. 788-791
    • Agogué, H.1    Brink, M.2    Dinasquet, J.3    Herndl, G.J.4
  • 4
    • 33845520639 scopus 로고    scopus 로고
    • Diversity of ammonia-oxidizing archaea and bacteria in the sediments of a hypernutrified subtropical estuary: Bahia del Tóbari, Mexico
    • Beman JM, Francis CA(2006) Diversity of ammonia-oxidizing archaea and bacteria in the sediments of a hypernutrified subtropical estuary: Bahia del Tóbari, Mexico. Appl Environ Microbiol 72:7767-7777
    • (2006) Appl Environ Microbiol , vol.72 , pp. 7767-7777
    • Beman, J.M.1    Francis, C.A.2
  • 5
    • 34248562001 scopus 로고    scopus 로고
    • Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient
    • DOI 10.1111/j.1462-2920.2007.01260.x
    • Bernhard AE, Tucker J, Giblin AE, Stahl DA(2007) Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient. Environ Microbiol 9: 1439-1447 (Pubitemid 46763523)
    • (2007) Environmental Microbiology , vol.9 , Issue.6 , pp. 1439-1447
    • Bernhard, A.E.1    Tucker, J.2    Giblin, A.E.3    Stahl, D.A.4
  • 6
    • 0032412330 scopus 로고    scopus 로고
    • Functional gene hybridization patterns of terrestrial ammonia-oxidizing bacteria
    • Bruns MA, Fries MR, Tiedje JM, Paul EA(1998) Functional gene hybridization patterns of terrestrial ammonia-oxidizing bacteria. Microb Ecol 36:293-302
    • (1998) Microb Ecol , vol.36 , pp. 293-302
    • Ma, B.1    Fries, M.R.2    Tiedje, J.M.3    Paul, E.A.4
  • 7
    • 35948999268 scopus 로고    scopus 로고
    • Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia
    • DOI 10.1038/ismej.2007.79, PII ISMEJ200779
    • Caffrey JM, Bano N, Kalanetra K, Hollibaugh JT(2007) Ammonia-oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia. ISME J 1:660-662 (Pubitemid 350076523)
    • (2007) ISME Journal , vol.1 , Issue.7 , pp. 660-662
    • Caffrey, J.M.1    Bano, N.2    Kalanetra, K.3    Hollibaugh, J.T.4
  • 8
    • 33947110858 scopus 로고    scopus 로고
    • Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea: A basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids
    • DOI 10.1111/j.1462-2920.2006.01227.x
    • Coolen MJL, Abbas B, van Bleijswijk J, Hopmans EC, Kuypers MMM, Wakeham SG, Damsté JSS(2007) Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea: a basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids. Environ Microbiol 9:1001-1016 (Pubitemid 46397097)
    • (2007) Environmental Microbiology , vol.9 , Issue.4 , pp. 1001-1016
    • Coolen, M.J.L.1    Abbas, B.2    Van Bleijswijk, J.3    Hopmans, E.C.4    Kuypers, M.M.M.5    Wakeham, S.G.6    Sinninghe Damste, J.S.7
  • 10
    • 51149114568 scopus 로고    scopus 로고
    • Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea
    • Dang H, Zhang X, Sun J, Li T, Zhang Z, Yang G(2008) Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea. Microbiology 154:2084-2095
    • (2008) Microbiology , vol.154 , pp. 2084-2095
    • Dang, H.1    Zhang, X.2    Sun, J.3    Li, T.4    Zhang, Z.5    Yang, G.6
  • 11
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong EF(1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89:5685-5689
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • Delong, E.F.1
  • 12
    • 0028594902 scopus 로고
    • High abundance of Archaea in Antarctic marine picoplankton
    • DeLong EF, Ying Wu K, Prezelin BB, Jovine RVM(1994) High abundance of Archaea in Antarctic marine picoplankton. Nature 371:695-697
    • (1994) Nature , vol.371 , pp. 695-697
    • Delong, E.F.1    Ying Wu, K.2    Prezelin, B.B.3    Rvm, J.4
  • 13
    • 26844541457 scopus 로고    scopus 로고
    • Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
    • Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB(2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102:14683-14688
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 14683-14688
    • Francis, C.A.1    Roberts, K.J.2    Beman, J.M.3    Santoro, A.E.4    Oakley, B.B.5
  • 15
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA(1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
    • (1999) Nucleic Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 19
    • 0035144174 scopus 로고    scopus 로고
    • Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR
    • DOI 10.1128/AEM.67.2.972-976.2001
    • Hermansson A, Lindgren PE(2001) Quantification of ammonia-oxidizing bacteria in arable soil by real-time PCR. Appl Environ Microbiol 67:972-976 (Pubitemid 32121396)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.2 , pp. 972-976
    • Hermansson, A.1    Lindgren, P.-E.2
  • 20
    • 0027077317 scopus 로고
    • Impact of bioroughness on interfacial solute exchange in permeable sediments
    • Huettel M, Gust G(1992) Impact of bioroughness on interfacial solute exchange in permeable sediments. Mar Ecol Prog Ser 89:253-267 (Pubitemid 23382327)
    • (1992) Marine Ecology Progress Series , vol.89 , Issue.2-3 , pp. 253-267
    • Huettel, M.1    Gust, G.2
  • 21
    • 8344250319 scopus 로고    scopus 로고
    • An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments
    • DOI 10.1016/j.femsec.2004.06.015, PII S0168649604002259
    • Ishii K, Mussmann M, MacGregor BJ, Amann R(2004) An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments. FEMS Microbiol Ecol 50:203-213 (Pubitemid 39480728)
    • (2004) FEMS Microbiology Ecology , vol.50 , Issue.3 , pp. 203-212
    • Ishii, K.1    Mussmann, M.2    MacGregor, B.J.3    Amann, R.4
  • 22
  • 23
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M(2001) Mega 2: molecular evolutionary genetics analysis software. Bioinformatics Appl Notes 17:1244-1245 (Pubitemid 33735359)
    • (2001) Bioinformatics , vol.17 , Issue.12 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 24
    • 0027398991 scopus 로고
    • Competition for limiting amounts of oxygen between Nitrosomonas europaea and Nitrobacter winogradskyi grown in mixed continuous cultures
    • Laanbroek HJ, Gerards S(1993) Competition for limiting amounts of oxygen between Nitrosomonas europaea and Nitrobacter winogradskyi grown in mixed continuous culture. Arch Microbiol 159:453-459 (Pubitemid 23113714)
    • (1993) Archives of Microbiology , vol.159 , Issue.5 , pp. 453-459
    • Laanbroek, H.J.1    Gerards, S.2
  • 26
    • 33747479446 scopus 로고    scopus 로고
    • Archaea predominance among ammonia-oxidizing prokaryotes
    • Leininger S, Urich T, Schloter M, Schwark L and others(2006) Archaea predominance among ammonia-oxidizing prokaryotes. Nature 442:806-809
    • (2006) Nature , vol.442 , pp. 806-809
    • Leininger, S.1    Urich, T.2    Schloter, M.3    Schwark, L.4
  • 27
    • 0344765523 scopus 로고    scopus 로고
    • Microbial community composition of wadden sea sediments as revealed by fluorescence in situ hybridization
    • Llobet-Brossa E, Rosselló-Mora R, Amann R(1998) Microbial community composition of Wadden Sea sediments as revealed by fluorescence in situ hybridization. Appl Environ Microbiol 64:2691-2696 (Pubitemid 28303320)
    • (1998) Applied and Environmental Microbiology , vol.64 , Issue.7 , pp. 2691-2696
    • Llobet-Brossa, E.1    Rossello-Mora, R.2    Amann, R.3
  • 29
    • 19344365907 scopus 로고    scopus 로고
    • Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal
    • Magalhães CM, Joye SB, Moreira RM, Wiebe WJ, Bordalo AA(2005a) Effect of salinity and inorganic nitrogen concentrations on nitrification and denitrification rates in intertidal sediments and rocky biofilms of the Douro River estuary, Portugal. Water Res 39:1783-1794
    • (2005) Water Res , vol.39 , pp. 1783-1794
    • Magalhães, C.M.1    Joye, S.B.2    Moreira, R.M.3    Wiebe, W.J.4    Bordalo, A.A.5
  • 30
    • 25844448674 scopus 로고    scopus 로고
    • Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro River estuary(Portugal)
    • Magalhães CM, Wiebe WJ, Joye SB, Bordalo AA(2005b) Inorganic nitrogen dynamics in intertidal rocky biofilms and sediments of the Douro River estuary(Portugal). Estuaries 28:592-606
    • (2005) Estuaries , vol.28 , pp. 592-606
    • Magalhães, C.M.1    Wiebe, W.J.2    Joye, S.B.3    Bordalo, A.A.4
  • 31
    • 34848833482 scopus 로고    scopus 로고
    • Composition and activity of beta-Proteobacteria ammonia-oxidizing communities associated with intertidal rocky biofilms and sediments of the Douro River estuary, Portugal
    • DOI 10.1111/j.1365-2672.2007.03390.x
    • Magalhães CM, Bano N, Wiebe WJ, Hollibaugh JT, Bordalo AA(2007) Composition and activity of beta-proteobacteria ammonia-oxidizing communities associated with intertidal rocky biofilms and sediments of the Douro River estuary, Portugal. J Appl Microbiol 103:1239-1250 (Pubitemid 47493270)
    • (2007) Journal of Applied Microbiology , vol.103 , Issue.4 , pp. 1239-1250
    • Magalhaes, C.1    Bano, N.2    Wiebe, W.J.3    Hollibaugh, J.T.4    Bordalo, A.A.5
  • 32
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel
    • Massana R, Murray AE, Preston CM, DeLong EF(1997) Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara channel. Appl Environ Microbiol 63:50-56 (Pubitemid 27020368)
    • (1997) Applied and Environmental Microbiology , vol.63 , Issue.1 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 33
    • 0032874459 scopus 로고    scopus 로고
    • Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia-oxidizing populations of the, subdivision of the class Proteobacteria in arable soils to nitrogen fertilizer
    • Mendum TA, Sockett RE, Hirsch PR(1999) Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia-oxidizing populations of the, subdivision of the class Proteobacteria in arable soils to nitrogen fertilizer. Appl Environ Microbiol 65:4155-4162 (Pubitemid 129519879)
    • (1999) Applied and Environmental Microbiology , vol.65 , Issue.9 , pp. 4155-4162
    • Mendum, T.A.1    Sockett, R.E.2    Hirsch, P.R.3
  • 35
    • 34247847886 scopus 로고    scopus 로고
    • Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre
    • DOI 10.1111/j.1462-2920.2007.01239.x
    • Mincer TJ, Church MJ, Taylor LT, Preston C, Karl DM, Delong EF(2007) Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific subtropical gyre. Environ Microbiol 9: 1162-1175 (Pubitemid 46697272)
    • (2007) Environmental Microbiology , vol.9 , Issue.5 , pp. 1162-1175
    • Mincer, T.J.1    Church, M.J.2    Taylor, L.T.3    Preston, C.4    Karl, D.M.5    DeLong, E.F.6
  • 37
    • 52949134066 scopus 로고    scopus 로고
    • Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary
    • Mosier AC, Francis CA(2008) Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary. Environ Microbiol 10:3002-3016
    • (2008) Environ Microbiol , vol.10 , pp. 3002-3016
    • Mosier, A.C.1    Francis, C.A.2
  • 38
    • 0037290270 scopus 로고    scopus 로고
    • Mac-robenthic community in the Douro estuary: Relations with trace metals and natural sediment characteristics
    • Mucha APM, Vasconcelos TSD, Bordalo AA(2003) Mac-robenthic community in the Douro estuary: relations with trace metals and natural sediment characteristics. Environ Pollut 121:169-180
    • (2003) Environ Pollut , vol.121 , pp. 169-180
    • Apm, M.1    Tsd, V.2    Bordalo, A.A.3
  • 39
    • 1842509857 scopus 로고    scopus 로고
    • Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR
    • Mumy KL, Findlay RH(2004) Convenient determination of DNA extraction efficiency using an external DNA recovery standard and quantitative-competitive PCR. J Microbiol Methods 57:259-268
    • (2004) J Microbiol Methods , vol.57 , pp. 259-268
    • Mumy, K.L.1    Findlay, R.H.2
  • 40
    • 33646181371 scopus 로고    scopus 로고
    • Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-RømøBasin, Wadden Sea
    • Musat N, Werner U, Knittel K, Kolb S and others(2006). Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea. Syst Appl Microbiol 29:333-348
    • (2006) Syst Appl Microbiol , vol.29 , pp. 333-348
    • Musat, N.1    Werner, U.2    Knittel, K.3    Kolb, S.4
  • 41
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, de Waal EC, Uitterlinder AG(1993) Profiling of comple×microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695-700 (Pubitemid 23072343)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.3 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 42
    • 52949137846 scopus 로고    scopus 로고
    • The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
    • Nicol GW, Leininger S, Schleper C, Prosser JI(2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10:2966-2978
    • (2008) Environ Microbiol , vol.10 , pp. 2966-2978
    • Nicol, G.W.1    Leininger, S.2    Schleper, C.3    Prosser, J.I.4
  • 43
    • 0030014717 scopus 로고    scopus 로고
    • The gene encoding ammonia monooxygenase subunit A exists in nearly three identical copies in Nitrosospira sp. NpAV
    • Norton JM, Low JM, Klotz MG(1996) The gene encoding ammonia monooxygenase subunit A exists in nearly three identical copies in Nitrosospira sp. NpAV. FEMS Microbiol Lett 139:181-188
    • (1996) FEMS Microbiol Lett , vol.139 , pp. 181-188
    • Norton, J.M.1    Low, J.M.2    Klotz, M.G.3
  • 44
    • 0036167265 scopus 로고    scopus 로고
    • Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
    • DOI 10.1007/s00203-001-0369-z
    • Norton JM, Alzerreca JJ, Suwa Y, Klotz MG(2002) Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria. Arch Microbiol 177:139-149 (Pubitemid 34143413)
    • (2002) Archives of Microbiology , vol.177 , Issue.2 , pp. 139-149
    • Norton, J.M.1    Alzerreca, J.J.2    Suwa, Y.3    Klotz, M.G.4
  • 47
    • 84986870589 scopus 로고
    • The use of DAPI for identifying and counting aquatic microflora
    • Porter KG, Feig YS(1980) The use of DAPI for identifying and counting aquatic microflora. Limnol Oceanogr 25:943-948
    • (1980) Limnol Oceanogr , vol.25 , pp. 943-948
    • Porter, K.G.1    Feig, Y.S.2
  • 48
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoa as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe JH, Witzel KP, Liesack W(1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63: 4704-4712 (Pubitemid 27524201)
    • (1997) Applied and Environmental Microbiology , vol.63 , Issue.12 , pp. 4704-4712
    • Rotthauwe, J.-H.1    Witzel, K.-P.2    Liesack, W.3
  • 49
    • 0034888194 scopus 로고    scopus 로고
    • Bacteria, diatoms and detritus in an intertidal sandflat subject to advective transport across the water-sediment interface
    • DOI 10.1023/A:1010687322291
    • Rusch A, Huettel M, Reimers CE, Taghon GL, Fuller CM(2001) Bacteria, diatoms and detritus in an intertidal sand-flat subjected to advective transport across the water-sediment interface. Biogeochemistry 55:1-27 (Pubitemid 32773888)
    • (2001) Biogeochemistry , vol.55 , Issue.1 , pp. 1-27
    • Rusch, A.1    Forster, S.2    Huettel, M.3
  • 50
    • 0042884058 scopus 로고    scopus 로고
    • Activity and distribution of bacterial populations in Middle Atlantic Bight shelf sands
    • DOI 10.1016/S0168-6496(02)00458-0, PII S0168649602004580
    • Rusch A, Huettel M, Reimers CE, Taghon GL, Fuller CM(2003) Activity and distribution of bacterial populations in Middle Atlantic Bight shelf sands. FEMS Microbiol Ecol 44:89-100 (Pubitemid 37034603)
    • (2003) FEMS Microbiology Ecology , vol.44 , Issue.1 , pp. 89-100
    • Rusch, A.1    Huettel, M.2    Reimers, C.E.3    Taghon, G.L.4    Fuller, C.M.5
  • 51
    • 0032493132 scopus 로고    scopus 로고
    • Abundance, vertical distribution, and community structure of benthic prokaryotes from permanently cold marine sediments (Svalbard, Arctic Ocean)
    • Sahm K, Berninger UG(1998) Abundance, vertical distribution, and community structure of benthic prokaryotes from permanently cold marine sediments(Svalbard, Arctic Ocean). Mar Ecol Prog Ser 165:71-80 (Pubitemid 28226715)
    • (1998) Marine Ecology Progress Series , vol.165 , pp. 71-80
    • Sahm, K.1    Berninger, U.-G.2
  • 52
    • 40949097432 scopus 로고    scopus 로고
    • Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary
    • Santoro AE, Francis CA, de Sieyes NR, Boehm BB(2008) Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary. Environ Microbiol 10: 1068-1079
    • (2008) Environ Microbiol , vol.10 , pp. 1068-1079
    • Santoro, A.E.1    Francis, C.A.2    De Sieyes, N.R.3    Boehm, B.B.4
  • 53
    • 0034123129 scopus 로고    scopus 로고
    • Relative abundance of Archaea and Bacteria along a thermal gradient of a shallow-water hydrothermal vent quantified by rRNA slot-blot hybridization
    • Sievert SM, Ziebis W, Kuever J, Sahm K(2000) Relative abundance of Archaea and Bacteria along a thermal gradient of a shallow-water hydrothermal vent quantified by rRNA slot-blot hybridization. Microbiol 146:1287-1293 (Pubitemid 30364720)
    • (2000) Microbiology , vol.146 , Issue.6 , pp. 1287-1293
    • Sievert, S.M.1    Ziebis, W.2    Kuever, J.3    Sahm, K.4
  • 54
    • 0000920641 scopus 로고
    • Growth of Nitrosomonas europaea in batch continuous culture
    • Skinner FA, Walker N(1961) Growth of Nitrosomonas europaea in batch continuous culture. Arch Microbiol 38:339-349
    • (1961) Arch Microbiol , vol.38 , pp. 339-349
    • Skinner, F.A.1    Walker, N.2
  • 55
    • 0033760479 scopus 로고    scopus 로고
    • Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5́-nuclease assays
    • Suzuki MT, Taylor LT, DeLong EF(2000) Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5́-nuclease assays. Appl Environ Microbiol 66:4605-4614
    • (2000) Appl Environ Microbiol , vol.66 , pp. 4605-4614
    • Suzuki, M.T.1    Taylor, L.T.2    Delong, E.F.3
  • 56
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matri×choice
    • Thompson JD, Higgins DG, Gibson TJ(1994) Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matri×choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 57
    • 33645459365 scopus 로고    scopus 로고
    • Characterization and quantification of ammonia-oxidizing bacteria in eutrophic coastal marine sediments using polyphasic molecular approaches and immunofluorescence staining
    • Urakawa H, Kurata S, Fujiwara T, Kuroiwa D and others(2006a) Characterization and quantification of ammonia-oxidizing bacteria in eutrophic coastal marine sediments using polyphasic molecular approaches and immunofluorescence staining. Environ Microbiol 8:787-803
    • (2006) Environ Microbiol , vol.8 , pp. 787-803
    • Urakawa, H.1    Kurata, S.2    Fujiwara, T.3    Kuroiwa, D.4
  • 59
    • 0033679726 scopus 로고    scopus 로고
    • The Douro estuary(Portugal): A mesotidal salt wedge
    • Vieira MEC, Bordalo AA(2000) The Douro estuary(Portugal): a mesotidal salt wedge. Oceanol Acta 23:585-594
    • (2000) Oceanol Acta , vol.23 , pp. 585-594
    • Mec, V.1    Bordalo, A.A.2
  • 60
    • 0023495837 scopus 로고
    • Nitrogen transformations in the Southern California Bight
    • Ward BB(1987) Nitrogen transformations in the Southern California Bight. Deep-Sea Res 34:785-805
    • (1987) Deep-Sea Res , vol.34 , pp. 785-805
    • Ward, B.B.1
  • 61
    • 0024933887 scopus 로고
    • Chemoautotrophic activity and nitrification in the oxygen minimum zone off Peru
    • Ward BB, Glover HE, Lipschultz F(1989) Chemoautotrophic activity and nitrification in the oxygen minimum zone off Peru. Deep-Sea Res 36:1031-1051
    • (1989) Deep-Sea Res , vol.36 , pp. 1031-1051
    • Ward, B.B.1    Glover, H.E.2    Lipschultz, F.3
  • 63
    • 51649123143 scopus 로고    scopus 로고
    • High bacterivory by the smallest phytoplankton in the North Atlantic Ocean
    • Zubkov MV, Tarran GA(2008) High bacterivory by the smallest phytoplankton in the North Atlantic Ocean. Nature 455:224-226
    • (2008) Nature , vol.455 , pp. 224-226
    • Zubkov, M.V.1    Tarran, G.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.