Individual-based Modelling and flow cytometry: Two suitable tools for predictive microbiology

5th International Conference on Simulation and Modelling in the Food and Bio-Industry 2008, FOODSIM 2008

Volumn , Issue , 2008, Pages 91-95

  Prats Soler, Clara ^a   Ferrer Savall, Jordi ^a   López Codina, Daniel ^a   Vives Rego, Josep ^b  

^a UNIVERSITAT POLITÈCNICA DE CATALUNYA   (Spain)

^b UNIVERSITY OF BARCELONA   (Spain)

Author keywords

Bacterial growth cycle; Flow cytometry; Individual based Modelling; Simulation

Indexed keywords

BACTERIA; MICROBIOLOGY; MODAL ANALYSIS; VIRTUAL REALITY;

BACTERIAL GROWTH; BIOMASS DISTRIBUTION; CONTINUOUS MODELLING; INDIVIDUAL-BASED MODELLING; PREDICTIVE MICRO-BIOLOGY; SIMULATION; SPATIAL HETEROGENEITY; VIRTUAL EXPERIMENTS;

FLOW CYTOMETRY;

EID: 68749098011     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (13)

1. Dens, EJ; K. Bernaerts; A.R. Standaert; J.U. Kreft; and J.F. Van Impe. 2005a. "Cell division theory and individual-based modeling of microbial lag. Part II. Modeling lag phenomena induced by temperature shifts." Int. J. Food Microbiol, 101, 319-332.
2. Dens, E.J; K. Bernaerts; A.R. Standaert; and J.F. Van Impe. 2005b. "Cell division theory and individual-based modeling of microbial lag. Part I. The theory of cell division." Int. J. Food Microbiol, 101,303-318.
3. Fleet, G.H. 1999. "Microorganisms in food ecosystems." Int. J. Food Microbiol, 50, 101-117.
4. Ginovart, M.; D. López; and J. Vails. 2002a. "INDISIM, an individual-based discrete simulation model to study bacterial cultures."/. Theor. Biol, 214, 305-319.
5. Ginovart, M.; D. López; J. Vails; and M. Silbert. 2002b. "Simulation modelling of bacterial growth in yoghurt." Int. J. Food Microbiol, 73,415-425.
6. Ginovart, M.; D. López; J. Vails; and M. Silbert. 2002c. "Individual-based simulations of bacterial growth on agar plates."Physical, 305, 604-618.
7. Grimm, V. 1999. "Ten years of Individual-based Modelling in ecology: what have we learned and what could we learn in the future?" Ecol Model, 115, 129-148.
8. Hilker, F.M.; M. Hinschb; and H.J. Poethkec. 2006. "Parameterizing, evaluating and comparing metapopulation models with data from individual-based simulations." Ecol Model 199,476-485.
9. Képès, F. 1986. "The cell cycle of Escherichia coli and some of its regulatory systems." FEMS Microbiol Reviews, 32, 225-246.
10. Kreft, J.U.; G. Booth; and J.W.T. Wimpenny. 1998. "BacSim, a simulator for individual-based modelling of bacterial colony growth." Microbiology, 144, 3275-3287.
11. Prats, C; D. López; A. Giro; J. Ferrer; and J. Vails. 2006. "Individual-based modelling of bacterial cultures to study the microscopic causes of the lag phase." J. Theor. Biol, 241, 939-953.
12. Prats, C; J. Ferrer; B. Flix; A. Giro; D. López; and J. Vives-Rego. 2007. "Evolution of biomass distribution during bacterial lag phase through flow cytometry, particle analysis and Individual-based Modelling." In: G. Nychas et al. (Ed.), 5th International Conference on Predictive Modelling in Foods. Proceedings, p. 301-304, Agricultural University of Athens, Greece (ISBN: 978-960-89313-7-4).
13. Prats, C; J. Ferrer; A. Giro; D. López; and J. Vives-Rego. 2008. "Analysis and Individual-based Modelling simulation of the stages in bacterial lag phase: basis for an updated definition." J. Theor. Biol, 252, 56-68