CAND3: A ubiquitously expressed gene immediately adjacent and in opposite transcriptional orientation to the ATM gene at 11q23.1

Mammalian Genome

Volumn 8, Issue 2, 1997, Pages 129-133

  Chen, Xiaeguang ^a,c   Yang, Lan ^a   Udar, Nitin ^a   Liang, Teresa ^a   Uhrhammer, Nancy ^a   Xu, Shunbin ^a   Bay, Jacques Olivier ^a   Wang, Zhijun ^a   Dandakar, Suganda ^a   Chiplunkar, Sujata ^a   Klisak, Ivana ^a   Telatar, Milhan ^a   Yang, Huanmin ^a   Concannon, Patrick ^b   Gatti, Richard A ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^c CEDARS SINAI MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL CYCLE PROTEIN; COMPLEMENTARY DNA; NPAT PROTEIN, HUMAN; NUCLEAR PROTEIN; PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; ATAXIA TELANGIECTASIA; CELL STRAIN COS1; CHEMISTRY; CHROMOSOME 11; CHROMOSOME MAP; DNA SEQUENCE; GENETIC TRANSCRIPTION; GENETICS; HUMAN; MOLECULAR GENETICS; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE;

AMINO ACID SEQUENCE; ANIMALS; ATAXIA TELANGIECTASIA; BASE SEQUENCE; BLOTTING, NORTHERN; CELL CYCLE PROTEINS; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN, PAIR 11; COS CELLS; DNA, COMPLEMENTARY; HUMANS; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PROTEINS; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION, GENETIC;

ANIMALIA; ATAXIA; ATAXIA TELANGIECTASIA;

EID: 6844226199     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900371     Document Type: Article

References (30)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990). Basic local alignment search tool. J Mol Biol 215, 403-410
2. Buckler AJ, Chang DD, Graw SL, Brook JD, Haber DA, Sharp PA, Housman DE (1991). Exon amplification: a strategy to isolate mammalian genes based on RNA splicing. Proc Natl Acad Sci USA 88, 4005-4009
3. Byrd PJ, McConville CM, Cooper P, Parkhill J, Stankovic T, McGuire GM, Thick JA, Taylor AMR (1996). Mutations revealed by sequencing the 5′ half of the gene for ataxia telangiectasia. Hum Mol Genet 5, 145-149
4. Cross SH, Charlton JA, Nan X. Bird AP (1994). Purification of CpG islands using a methylated DNA binding column. Nature Genet 6, 236-244
5. Feinberg AP, Vogelstein BA (1984). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity: addendum Anal Biochem 137, 266-267
6. Frohamn M, Dush M, Martin G (1988). Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci USA 88, 8998-9002
7. Fukao T, Yamaguchi S, Kano M, Orii T, Fujiki Y, Osumi T, Hashimoto T (1990). Molecular cloning and sequence of the complementary DNA encoding human mitochondrial acetoacetyl-coenzyme A thiolase and study of the variant enzymes in cultured fibroblasts from patients with 3-ketothiolase deficiency. J Clin Invest 86, 2086-2092
8. Gatti RA, Berkel I, Boder E, Braedt G, Charmley P, Concannon P, Ersoy F, Foroud T, Jaspers NGJ, Lange K, Lathrop GM, Leppert M, Nakamura Y, O'Connell P, Paterson M, Salser W, Sanal O, Silver J, Sparkes RS, Susi E, Weeks DE, Wei S, White R, Yoder F (1988). Localization of an ataxia-telangiectasia gene to chromosome 11q22-23. Nature 336, 577-580
9. Gatti RA, Lange E, Rotman G, Chen X, Uhrhammer N, Polikou J, Liang T, Chiplunkar S, Yang L, Udar N, Dandekar S, Sheikhavandi S, Wang Z, Yang HM, Polikow J, Elasshoff M, Teletar M, Sanal O, Chessa L, McConville C, Taylor M, Shiloh Y, Porras O, Borresen AL, Wegner RD, Curry C, Gerken S, Lange K, Concannon P (1994). Genetic haplotyping of ataxia-telangiectasia families localizes the major gene to a ∼850 kb region on chromosome 11Q23.1. Int J Radiat Biol 66, 57-62
10. Gavalas A, Dixon JE, Braytin KA, Zalkin H (1993). Co-expression of two closely linked avian genes for purine nucleotide synthesis from a bidirectional promoter. Mol Cell Biol 13, 4784-4792
11. Genetics Computer Group (April 1991). Program Manual for the GCG Package, Version 7. 575 Science Drive, Madison, Wisconsin, USA 53711
12. Heikkila P, Soininen R, Tryggvason K (1993). Directional regulatory activity of cis-acting elements in the bidirectional a1 (IV) and a2 (IV) collagen gene promoter. J Biol Chem 268, 24677-24682
13. Hofmann K, Stoffel W (1993). TMBASE-A database of membrane spanning protein segments. Biol Chem 374, 166
14. Imai T, Yamauchi M, Seki N, Saito T, Matsuda Y, Itoh H, Nagase T, Nomura N, Hori T (1996). Identification and characterization of a newgene physically linked to the ATM gene. Genome Res 6, 439-447
15. Kano M, Fukao T, Yamaguchi S, Orri T, Osumi T, Hashimoto T (1991). Structure and expression of the human mitochondrial acetoacetyl-CoA thiolase-encoding gene. Gene 109, 285-290
16. Korn B, Sedlacek Z, Manca A, Kioschis P, Konecki D, Lehrach H, Poustka A (1992). A strategy for the selection of transcribed sequences in the Xq28 region. Hum Mol Genet 1, 235-241
17. Lagercrantz J, Carson E, Larson C, Nordsenskjold M, Gunther W (1995). Isolation and characterization of a novel gene close to the human phosphoinositide-specific phospholipase Cb3 gene on chromosomal region 11q13. Genomics, 31, 380-384
18. Lange E, Borresen A, Chen X, Chessa L, Chiplunkar S, Concannon P, Dandekar S, Gerken S, Lange K, Liang T, McConville C, Polakow J, Porras O, Rotman G, Sanal O, Sheikhavandi S, Shiloh Y, Sobel E, Taylor M, Telatar M, Teraoka S, Tolun A, Udar N, Uhrhammer N, Vanagaite L, Wang Z, Wapelhorst B, Wright J, Yang HM, Yang L, Ziv Y, Gatti RA (1995). Localization of an ataxia-telangiectasia gene to an ∼500 kb interval on chromosome 11q23.1: linkage analysis of 176 families by an international consortium. Am J Hum Genet 57, 112-119
19. Loh EY, Elliott JF, Cwirla S, Lanier LL, Davis MM (1989). Polymerase chain reaction with single-sided specificity: analysis of T cell receptor d chain. Science 243, 217-220
20. Nagasawa H, Yamaguchi S, Orri T, Schutgens RBH, Sweetman L, Hashimoto T (1989). Heterogeneity of defects in mitochondrial acetoacetylCoA thiolase biosynthesis in fibroblasts from four patients with 3-ketothiolase deficiency. Pediatr Res 26, 145-149
21. Orita M, Suzuki Y, Sellya T, Hayashi K (1989). Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics, 5, 874-879
22. Parimoo S, Pantanjhali SR, Shukla G, Chaplin DD, Weissman SM (1991). cDNA selections: efficient PCR approach for the selection of cDNAs encoded in large chromosomal DNA fragments. Proc Natl Acad Sci USA 88, 9623-9627
23. Pearson WR, Lipman DJ (1988). Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85, 2444-2448
24. Roest PAM, Roberts RG, Sugino S, van Ommen GJB, den Dunnen JT (1993). Protein truncation test (PTT) for rapid detection of translation-terminating mutations. Hum Mol Genet 2, 1719-1721
25. Sambrook J, Fritsch EF, Maniatis T (1989). Molecular Cloning, A Laboratory Manual 2nd edn. (Cold Spring Harbor, N. Y.: Cold Spring Harbor Laboratory Press)
26. Savitsky K, Bar-Shira A, Gilad S, Rotman G, Ziv Y, Vanagaite L, Tagle DA, Smith S, Uziel T, Sfez S, Ashkenazi M, Pecker I, Frydman M, Harnik R, Patanjali SR, Simmons A, Clines GA, Sartiel A, Gatti RA, Chessa L, Sanal O, Lavin MF, Jaspers NGJ, Taylor AMR, Arlett CF, Miki T, Weissman SM, Lovett M, Collins FS, Shiloh Y (1995). A single ataxia-telangiectasia gene with a product similar to PI-3 kinase. Science 268, 1749-1753
27. Shinya E, Shimada T (1994). Identification of two initiator elements in the bidirectional promoter of the human dihydrofolate reductase and mismatch repair protein 1 genes. Nucleic Acids Res 22, 2143-2149
28. White M, Carvalho M, Derse D, O'Brien S, Dean M (1992). Detecting single base substitutions as heteroduplex polymorphisms. Genomics 12, 301-306
29. Worley KC, Wiese BA, Smith RF (1995). BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 5, 173-184
30. Wright KL, White LC, Kelly A, Beck S, Trowsdale J, Ting J P-Y (1995). Co-ordinate regulation of the human TAP1 and LMP2 genes from a shared bidirectional promoter. J Exp Med 181, 1459-1471