Genetic composition of Atlantic and Mediterranean recruits of European eel Anguilla anguilla based on EST-linked microsatellite loci

Journal of Fish Biology

Volumn 74, Issue 9, 2009, Pages 2034-2046

  Pujolar, J M ^a   De Leo, G A ^b   Ciccotti, E ^c   Zane, L ^a  

^a UNIVERSITY OF PADOVA   (Italy)

^b UNIVERSITY OF PARMA   (Italy)

^c UNIVERSITY OF ROME TOR VERGATA   (Italy)

Author keywords

Arrival waves; Genetic patchiness; Genetic structure; Panmixia

Indexed keywords

MICROSATELLITE DNA;

ALLELE; ANIMAL; ARTICLE; ATLANTIC OCEAN; COMPARATIVE STUDY; EEL; EXPRESSED SEQUENCE TAG; GENE FREQUENCY; GENETICS; GENOTYPE; MEDITERRANEAN SEA; POPULATION GENETICS; POPULATION MIGRATION; REPRODUCTION; STATISTICAL MODEL;

ALLELES; ANGUILLA; ANIMAL MIGRATION; ANIMALS; ATLANTIC OCEAN; EXPRESSED SEQUENCE TAGS; GENE FREQUENCY; GENETICS, POPULATION; GENOTYPE; MEDITERRANEAN SEA; MICROSATELLITE REPEATS; MODELS, STATISTICAL; REPRODUCTION;

ANGUILLA ANGUILLA;

EID: 68349154241     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2009.02267.x     Document Type: Article

References (49)

1. ST-outlier method. BMC it Informatics 9, 323.
2. Arai, T., Otake, T. & Tsukamoto, T. (2000). Timing of metamorphosis and larval segregation of the Atlantic eels Anguilla rostrata and A. anguilla, as revealed by otolith microstructure and microchemistry. Marine Biology 137, 39 45.
3. Belkhir, K., Borsa, P., Goudet, J. & Bonhomme, F. (2005). GENETIX 4.05: Logiciel sous Windows pour la Genetique des Populations. Montpellier, France : Laboratoire Genome & Population, CNRS-UPR, Universite de Montpellier II.
4. Boetius, I. & Boetius, J. (1989). Ascending elvers, Anguilla anguilla, from 5 European localities. Analyses of pigmentation stages, condition, chemical composition and energy reserves. Dana 7, 1 12.
5. Bonhommeau, S., Chassot, E. & Rivot, E. (2008a). Fluctuations in European eel (Anguilla anguilla) recruitment resulting from environmental changes in the Sargasso Sea. Fisheries Oceanography 17, 32 44.
6. Bonhommeau, S., Chassot, E., Planque, B., Rivot, E., Knapp, A. H. & Le Pape, O. (2008b). Impact of climate on eel populations of the Northern Hemisphere. Marine Ecology Progress Series 373, 71 80.
7. Bonhommeau, S., Le Pape, O., Gascuel, D., Blanke, B., Tréguier, A. M., Grima, N., Vermard, Y., Castonguay, M. & Rivot, E. (2009). Estimates of the mortality and the duration of the trans-Atlantic migration of European eel Anguilla anguilla leptocephali using a particle tracking model. Journal of Fish Biology 74, 1891 1914.
8. Campbell, D. & Bernatchez, L. (2004). Genomic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes. Molecular Biology and Evolution 21, 945 956.
9. Cavalli-Sforza, L. L. & Edwards, A. W. F. (1967). Phylogenetic analysis models and estimation procedures. Evolution 32, 550 570.
10. Conover, D. O., Clarke, L. M., Munch, S. B. & Wagner, G. N. (2006). Spatial and temporal scales of adaptive divergence in marine fishes and the implications for conservation. Journal of Fish Biology 69, 21 47.
11. Dannewitz, J., Maes, G. E., Johansson, L., Wickstrom, H., Volckaert, F. A. M. & Jarvi, T. (2005). Panmixia in the European eel: a matter of time. Proceedings of the Royal Society B 272, 1129 1137.
12. Desaunay, Y. & Guerault, D. (1997). Seasonal and long-term changes in biometrics of eel larvae: a possible relationship between recruitment variation and North Atlantic ecosystem productivity. Journal of Fish Biology 51, 317 339.
13. Friedland, K. D., Miller, M. I. & Knights, B. (2007). Oceanic changes in the Sargasso Sea and declines in recruitment of the European eel. ICES Journal of Marine Science 64, 519 530.
14. van Ginneken, V., Antonissen, E., Muller, U. K., Booms, R., Eding, E., Verreth, J. & Van den Thillart, G. (2005). Eel migration to the Sargasso: remarkably high swimming efficiency and low energy costs. Journal of Experimental Biology 208, 1329 1335.
15. Grassi, B. (1896). The reproduction and metamorphosis of the European eel (Anguilla vulgaris). Proceedings of the Royal Society 60, 260 271.
16. Harding, E. F. (1985). On the homogeneity of the European eel (Anguilla anguilla). Dana 4, 49 66.
17. Hedgecock, D. (1994). Does variance in reproductive success limit effective population size of marine organisms? In Genetics and Evolution of Aquatic Organisms (Beaumont, A., ed.), pp. 122 134. London : Chapman & Hall.
18. Hemmer-Hansen, J., Nielsen, E. E., Frydenberg, J. & Loeschcke, V. (2007). Adaptive divergence in a high gene flow environment: Hsc70 variation in the European flounder (Platichthys flesus). Heredity 99, 592 600.
19. Hendry, A. P. & Day, T. (2005). Population structure attributable to reproductive time: isolation by time and adaptation by time. Molecular Ecology 14, 901 916.
20. Johnson, J. & Stevens, I. (2000). A fine resolution model of the eastern North Atlantic between the Azores, the Canary Islands and the Gibraltar Strait. Deep-Sea Research 47, 875 899.
21. Kalinowski, S. T., Wagner, A. P. & Taper, M. L. (2006). ML-Relate: a computer program for maximum estimation of relatedness and relationship. Molecular Ecology Notes 6, 576 579.
22. Kettle, A. & Haines, K. (2006). How does the European eel (Anguilla anguilla) retain its population structure during its larval migration across the North Atlantic Ocean? Canadian Journal of Fisheries and Aquatic Sciences 63, 90 106.
23. Kettle, A., Bakker, D. C. E. & Haines, K. (2008). Impact of the North Atlantic Oscillation on the trans-Atlantic migrations of the European eel (Anguilla anguilla). Journal of Geophysical Research 113, GO3004. doi:10.1029/2007JG000589
24. Knights, B. (2003). A review of the possible impacts of long-term oceanic and climate changes and fishing mortality on recruitment of anguillid eels of the Northern hemisphere. Science of the Total Environment 310, 237 244.
25. Lecomte-Finiger, R. (1994). The early life of the European eel. Nature 370, 424.
26. Maes, G. E. & Volckaert, F. A. M. (2002). Clinal genetic variation and isolation by distance in the European eel Anguilla anguilla. Biological Journal of the Linnean Society 77, 509 522.
27. Maes, G. E., Pujolar, J. M., Hellemans, B. & Volckaert, F. A. M. (2006). Evidence of isolation by time in the European eel (Anguilla anguilla). Molecular Ecology 15, 2095 2107.
28. Mann, C. R. (1967). The termination of the Gulf Stream and the beginning of the North Atlantic Current. Deep Sea Research 14, 337 359.
29. McCleave, J. D. (1993). Physical and behavioral controls on the oceanic distribution and migration of leptocephali. Journal of Fish Biology 43, 243 273.
30. McCleave, J. D. (2008). Contrasts between spawning times of Anguilla species estimated from larval sampling at sea and from otolith analysis of recruiting glass eels. Marine Biology 155, 249 262.
31. O'Malley, K. G. & Banks, M. A. (2008). A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants. Proceedings of the Royal Society B 275, 2813 2821.
32. Pujolar, J. M., Roldan, M. I. & Pla, C. (2002). A genetic assessment of the population structure of swordfish (Xiphias gladius) in the Mediterranean Sea. Journal of Experimental Marine Biology and Ecology 276, 19 29.
33. Pujolar, J. M., Roldan, M. I. & Pla, C. (2003). Genetic analysis of tuna populations Thunnus thynnus thynnus and T. alalunga. Marine Biology 143, 613 621.
34. Pujolar, J. M., Maes, G. E. & Volckaert, F. A. M. (2006). Genetic patchiness among recruits of the European eel Anguilla anguilla. Marine Ecology Progress Series 307, 209 217.
35. Pujolar, J. M., Maes, G. E. & Volckaert, F. A. M. (2007). Genetic and morphometric heterogeneity among recruits of the European eel Anguilla anguilla. Bulletin of Marine Sciences 81, 297 308.
36. Pujolar, J. M., Maes, G. E., Van Houdt, J. K. J. & Zane, L. (2008). Isolation and characterization of EST-linked microsatellite loci for the European eel, Anguilla anguilla. Molecular Ecology Resources 9, 233 235.
37. Raymond, M. & Rousset, F. (1995). GENEPOP (version 1.2): a population genetics software for exact tests and ecumenicism. Journal of Heredity 86, 248 249.
38. Rice, W. R. (1989). Analyzing tables and statistical tests. Evolution 43, 223 225.
39. Schmidt, J. (1923). Breeding places and migration of the eel. Nature 111, 51 54.
40. Schneider, S., Roessli, D. & Excoffier, L. (2000). ARLEQUIN: a Software for Population Genetics Data Analysis Version 3.0 Geneva, Switzerland : Genetics and Biometry Laboratory, Department Anthropology, University of Geneva.
41. Tesch, F. W. (2003). The Eel, 3rd edn. Oxford : Blackwell Science Ltd.
42. Van Oosterhout, C. V., Hutchinson, W. F., Wills, D. P. M. & Shipley, P. (2004). Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology 4, 535 538.
43. Vasemagi, A., Nilsson, J. & Primmer C. R. (2005). Expressed sequence tag-linked microsatellites as source of gene-associated polymorphisms for signatures of divergent selection in Atlantic salmon (Salmo salar). Molecular Biology and Evolution 22, 1067 1076.
44. Weir, B. S. & Cockerman, C. C. (1984). Estimating F-statistics for the analysis of population structure. Evolution 38, 1358 1370.
45. Wilding, C. S., Butlin, R. K. & Grahame, J. (2001). Differential gene exchange between parapatric morphs of Littorina saxatilis detected using AFLP markers. Journal of Evolutionary Biology 14, 611 619.
46. Wirth, T. & Bernatchez, L. (2001). Genetic evidence against panmixia in European eel. Nature 409, 1037 1040.
47. Wright, S. (1931). Evolution in Merdelian populations. Genetics 16, 97 159.
48. Goudet, J. (2002). FSTAT, a Program to Estimate and Test Gene Diversities and Fixation Indices (v. 2.9.3.2.). Available from http://www2.unil.ch/opgen/ softwares/fstat.htm.
49. ICES. (2008). Report of the joint EIFAC/ICES Working Group on Eels (WGEEL), 3-9 September 2008, Leuven, Belgium. ICES CM 2008/ACFM:15. Available at http://www.icesdk/workinggroups/ViewWorkingGroup.aspx?ID=75.