-
2
-
-
56749139615
-
Accelerating advanced MRI reconstructions on GPUs
-
May
-
Stone, S.S., Haldar, J.P., Tsao, S.C., Hwu, W.W., Liang, Z., Sutton, B.P.: Accelerating advanced MRI reconstructions on GPUs. In: Proc. of 2008 Computing Frontiers Conference, May 7-9 (2008)
-
(2008)
Proc. of 2008 Computing Frontiers Conference
, pp. 7-9
-
-
Stone, S.S.1
Haldar, J.P.2
Tsao, S.C.3
Hwu, W.W.4
Liang, Z.5
Sutton, B.P.6
-
3
-
-
35948963714
-
Accelerating molecular modeling applications with graphics processors
-
Stone, J.E., Phillips, J.C., Freddolino, P.L., Hardy, D.J., Trabuco, L.G., Schulten, K.: Accelerating molecular modeling applications with graphics processors. J. Comput. Chem. 28, 2618 (2007)
-
(2007)
J. Comput. Chem. 28
, pp. 2618
-
-
Stone, J.E.1
Phillips, J.C.2
Freddolino, P.L.3
Hardy, D.J.4
Trabuco, L.G.5
Schulten, K.6
-
4
-
-
41249087856
-
General purpose molecular dynamics simulations fully implemented on graphics processing units
-
Anderson, J.A., Lorenz, C.D., Travesset, A.: General purpose molecular dynamics simulations fully implemented on graphics processing units. J. Comput. Phys. 227, 5342 (2008)
-
(2008)
J. Comput. Phys. 227
, pp. 5342
-
-
Anderson, J.A.1
Lorenz, C.D.2
Travesset, A.3
-
5
-
-
84877051133
-
Protein explorer: A petaflops special-purpose computer system for molecular dynamics simulations
-
November 15-21
-
Taiji, M., Narumi, T., Ohno, Y., Futatsugi, N., Suenaga, A., Takada, N., Konagaya, A.: Protein Explorer: A petaflops special-purpose computer system for molecular dynamics simulations. In: Proc. of 2003 ACM/IEEE Supercomputing Conference, November 15-21 (2003)
-
(2003)
Proc. of 2003 ACM/IEEE Supercomputing Conference
-
-
Taiji, M.1
Narumi, T.2
Ohno, Y.3
Futatsugi, N.4
Suenaga, A.5
Takada, N.6
Konagaya, A.7
-
6
-
-
35348886062
-
Anton: A special-purpose machine for molecular dynamics simulation
-
June 9-13
-
Shaw, D.E., Deneroff, M.M., Dror, R.O., Kuskin, J.S., Larson, R.H., Salmon, J.K., Young, C., Batson, B., Bowers, K.J., Chao, J.C., Eastwood, M.P., Gagliardo, J., Grossman, J.P., Ho, C.R., Ierardi, D.J., Kolossv́ary, I., Klepeis, J.L., Layman, T., McLeavey, C., Moraes, M.A., Mueller, R., Priest, E.C., Shan, Y., Spengler, J., Theobald, M., Towles, B., Wang, S.C.: Anton: A special-purpose machine for molecular dynamics simulation. In: Proc. of the 34th Annual International Symposium on Computer Architecture, June 9-13 (2007)
-
(2007)
Proc. of the 34th Annual International Symposium on Computer Architecture
-
-
Shaw, D.E.1
Deneroff, M.M.2
Dror, R.O.3
Kuskin, J.S.4
Larson, R.H.5
Salmon, J.K.6
Young, C.7
Batson, B.8
Bowers, K.J.9
Chao, J.C.10
Eastwood, M.P.11
Gagliardo, J.12
Grossman, J.P.13
Ho, C.R.14
Ierardi, D.J.15
Kolossv́ary, I.16
Klepeis, J.L.17
Layman, T.18
McLeavey, C.19
Moraes, M.A.20
Mueller, R.21
Priest, E.C.22
Shan, Y.23
Spengler, J.24
Theobald, M.25
Towles, B.26
Wang, S.C.27
more..
-
7
-
-
32644484370
-
A review of multiscale analysis: Examples from systems biology materials engineering and other fluid-surface interacting systems
-
Vlachos, D.G.: A review of multiscale analysis: Examples from systems biology, materials engineering, and other fluid-surface interacting systems. Adv. Chem. Eng. 30, 1-61 (2005)
-
(2005)
Adv. Chem. Eng. 30
, pp. 1-61
-
-
Vlachos, D.G.1
-
8
-
-
33846339776
-
GPU accelerated molecular dynamics simulation of thermal conductivities
-
Yang, J., Wang, Y., Chen, Y.: GPU accelerated molecular dynamics simulation of thermal conductivities. J. Comput. Phys. 221, 799 (2006)
-
(2006)
J. Comput. Phys. 221
, pp. 799
-
-
Yang, J.1
Wang, Y.2
Chen, Y.3
-
9
-
-
30744437399
-
Flexible simple point-charge water model with improved liquid-state properties
-
Wu, Y., Tepper, H.L., Voth, G.: Flexible simple point-charge water model with improved liquid-state properties. J. Chem. Phys. 124, 024503 (2006)
-
(2006)
J. Chem. Phys. 124
, pp. 024503
-
-
Wu, Y.1
Tepper, H.L.2
Voth, G.3
-
11
-
-
55649109070
-
-
Nguyen, H. (ed.), ch.31.Addison-Wesley, Boston
-
Nguyen, H. (ed.): GPU Gems 3, ch. 31. Addison-Wesley, Boston (2008)
-
(2008)
GPU Gems 3
-
-
-
12
-
-
45849099839
-
Harvesting graphics power for MD simulations
-
Van Meel, J.A., Arnold, A., Frenkel, D., Zwart, S.F.P., Belleman, R.G.: Harvesting graphics power for MD simulations. Mol. Sim. 34, 259 (2008)
-
(2008)
Mol. Sim. 34
, pp. 259
-
-
Van Meel, J.A.1
Arnold, A.2
Frenkel, D.3
Zwart, S.F.P.4
Belleman, R.G.5
-
13
-
-
84986512474
-
CHARMM: A program for macromolecular energy minimization and dynamics calculations
-
Brooks, B.R., Bruccoleri, R.E., Olafson, B.D., States, D.J., Swaminathan, S., Karplus, M.: CHARMM: A program for macromolecular energy, minimization, and dynamics calculations. J. Comput. Chem. 4, 187 (1983)
-
(1983)
J. Comput. Chem. 4
, pp. 187
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
14
-
-
0035789518
-
GROMACS 3.0: A package for molecular simulaton and trajectory analysis
-
Lindahl, E., Hess, B., Van der Spoel, D.: GROMACS 3.0: A package for molecular simulaton and trajectory analysis. J. Mol. Model. 7, 306 (2001)
-
(2001)
J. Mol. Model. 7
, pp. 306
-
-
Lindahl, E.1
Hess, B.2
Van Der Spoel, D.3
-
15
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips, J.C., Braun, R., Wang, W., Gumbart, J., Tajkhorshid, E., Villa, E., Chipot, C., Skeel, R.D., Kaĺe, L., Schulten, K.: Scalable molecular dynamics with NAMD. J. Comput. Chem. 26, 1781 (2005)
-
(2005)
J. Comput. Chem. 26
, pp. 1781
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kalé, L.9
Schulten, K.10
-
16
-
-
33644879448
-
Absolute hydration free energy scale for alkali and halide ions established from simulations with a polarizable force field
-
Lamoureux, G., Roux, B.: Absolute hydration free energy scale for alkali and halide ions established from simulations with a polarizable force field. J. Phys. Chem. B. 110, 3308 (2006)
-
(2006)
J. Phys. Chem. B. 110
, pp. 3308
-
-
Lamoureux, G.1
Roux, B.2
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