메뉴 건너뛰기




Volumn 5462 LNBI, Issue , 2009, Pages 114-125

Generalized binary tanglegrams: Algorithms and applications

Author keywords

[No Author keywords available]

Indexed keywords

APPROXIMABILITY; BIOLOGICAL APPLICATIONS; CO-SPECIATION; EFFICIENT ALGORITHM; FIXED-PARAMETER TRACTABILITY; GENE TREE; HEURISTIC SOLUTIONS; LAYOUT PROBLEMS; PHYLOGENETIC TREES;

EID: 68249093526     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-00727-9_13     Document Type: Conference Paper
Times cited : (15)

References (13)
  • 1
    • 2442562450 scopus 로고    scopus 로고
    • Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution
    • Arvestad, L., Berglund, A.-C., Lagergren, J., Sennblad, B.: Gene tree reconstruction and orthology analysis based on an integrated model for duplications and sequence evolution. In: RECOMB, pp. 326-335 (2004)
    • (2004) RECOMB , pp. 326-335
    • Arvestad, L.1    Berglund, A.-C.2    Lagergren, J.3    Sennblad, B.4
  • 3
    • 85031913950 scopus 로고
    • Optimal algorithms for list indexing and subset rank
    • In: Dehne, F., Santoro, N., Sack, J.-R. (eds.),LNCS, Springer, Heidelberg
    • Dietz, P.F.: Optimal algorithms for list indexing and subset rank. In: Dehne, F., Santoro, N., Sack, J.-R. (eds.) WADS 1989. LNCS, vol.382, pp. 39-46. Springer, Heidelberg (1989)
    • (1989) WADS 1989 , vol.382 , pp. 39-46
    • Dietz, P.F.1
  • 4
    • 33744915684 scopus 로고    scopus 로고
    • Optimal leaf ordering for two and a half dimensional phylogenetic tree visualisation
    • Dwyer, T., Schreiber, F.: Optimal leaf ordering for two and a half dimensional phylogenetic tree visualisation. In: InVis. au, pp. 109-115 (2004)
    • (2004) Vis. au , pp. 109-115
    • Dwyer, T.1    Schreiber, F.2
  • 5
    • 33744915004 scopus 로고    scopus 로고
    • Comparing trees via crossing minimization
    • In: Ramanujam, R., Sen, S. (eds.),LNCS, Springer, Heidelberg
    • Fernau, H., Kaufmann, M., Poths, M.: Comparing trees via crossing minimization. In: Ramanujam, R., Sen, S. (eds.) FSTTCS 2005. LNCS, vol.3821, pp. 457-469. Springer, Heidelberg (2005)
    • (2005) FSTTCS 2005 , vol.3821 , pp. 457-469
    • Fernau, H.1    Kaufmann, M.2    Poths, M.3
  • 6
    • 0000365320 scopus 로고
    • Fitting the gene lineage into its species lineage. A parsimony strategy illustrated by cladograms constructed from globin sequences
    • Goodman, M., Czelusniak, J., Moore, G.W., Romero-Herrera, A.E., Matsuda, G.: Fitting the gene lineage into its species lineage. a parsimony strategy illustrated by cladograms constructed from globin sequences. Systematic Zoology 28, 132-163 (1979)
    • (1979) Systematic Zoology 28 , pp. 132-163
    • Goodman, M.1    Czelusniak, J.2    Moore, G.W.3    Romero-Herrera, A.E.4    Matsuda, G.5
  • 8
    • 37249043167 scopus 로고    scopus 로고
    • Seeded tree alignment and planar tanglegram layout
    • In: Giancarlo, R., Hannenhalli, S. (eds.), LNCS (LNBI), Springer, Heidelberg
    • Lozano, A., Pinter, R.Y., Rokhlenko, O., Valiente, G., Ziv-Ukelson, M.: Seeded tree alignment and planar tanglegram layout. In: Giancarlo, R., Hannenhalli, S. (eds.) WABI 2007. LNCS (LNBI), vol.4645, pp. 98-110. Springer, Heidelberg (2007)
    • (2007) WABI 2007 , vol.4645 , pp. 98-110
    • Lozano, A.1    Pinter, R.Y.2    Rokhlenko, O.3    Valiente, G.4    Ziv-Ukelson, M.5
  • 9
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison, W.P.: Gene trees in species trees. Systematic Biology 46(3), 523-536 (1997)
    • (1997) Systematic Biology , vol.46 , Issue.3 , pp. 523-536
    • Maddison, W.P.1
  • 10
    • 68249088228 scopus 로고    scopus 로고
    • Drawing binary tanglegrams: An experimental evaluation
    • In: CoRR, abs/0806.0928; an updated version of this manuscript will appear in
    • Nöllenburg, M., Holten, D., Völker, M., Wolff, A.: Drawing binary tanglegrams: An experimental evaluation. In: CoRR, abs/0806.0928 (2008); an updated version of this manuscript will appear in: The proceedings of ALENEX 2009
    • (2008) The proceedings of ALENEX 2009
    • Nöllenburg, M.1    Holten, D.2    Völker, M.3    Wolff, A.4
  • 12
    • 34248217100 scopus 로고    scopus 로고
    • Inferring angiosperm phylogeny from EST data with widespread gene duplication
    • Sanderson, M., McMahon, M.: Inferring angiosperm phylogeny from EST data with widespread gene duplication. BMC Evolutionary Biology 7(suppl. 1), S3 (2007)
    • (2007) BMC Evolutionary Biology , vol.7 , Issue.SUPPL. 1
    • Sanderson, M.1    McMahon, M.2
  • 13
    • 0021978959 scopus 로고
    • Cross-species gene transfer; implications for a new theory of evolution
    • Syvanen, M.: Cross-species gene transfer; implications for a new theory of evolution. J. Theor Biol. 112 (1985)
    • (1985) J. Theor Biol. 112
    • Syvanen, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.