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Volumn 47, Issue 3, 2009, Pages 183-187

Detection of RNA expression from pseudogenes and non-coding genomic regions of Mycobacterium leprae

Author keywords

Mycobacterium leprae; Noncoding DNA; Pseudogene; Transcript

Indexed keywords

BACTERIAL RNA;

EID: 68149124512     PISSN: 08824010     EISSN: 10961208     Source Type: Journal    
DOI: 10.1016/j.micpath.2009.06.006     Document Type: Article
Times cited : (14)

References (29)
  • 1
    • 11144239489 scopus 로고    scopus 로고
    • Comprehensive analysis of pseudogenes in prokaryotes: widespread gene decay and failure of putative horizontally transferred genes
    • Liu Y., Harrison P.M., Kunin V., and Gerstein M. Comprehensive analysis of pseudogenes in prokaryotes: widespread gene decay and failure of putative horizontally transferred genes. Genome Biol 5 (2004) R64
    • (2004) Genome Biol , vol.5
    • Liu, Y.1    Harrison, P.M.2    Kunin, V.3    Gerstein, M.4
  • 2
    • 20144362746 scopus 로고    scopus 로고
    • Recognizing the pseudogenes in bacterial genomes
    • Lerat E., and Ochman H. Recognizing the pseudogenes in bacterial genomes. Nucleic Acids Res 33 (2005) 3125-3132
    • (2005) Nucleic Acids Res , vol.33 , pp. 3125-3132
    • Lerat, E.1    Ochman, H.2
  • 5
    • 0032127258 scopus 로고    scopus 로고
    • Reductive evolution of resident genomes
    • Andersson S.G., and Kurland C.G. Reductive evolution of resident genomes. Trends Microbiol 6 (1998) 263-268
    • (1998) Trends Microbiol , vol.6 , pp. 263-268
    • Andersson, S.G.1    Kurland, C.G.2
  • 6
    • 34848903282 scopus 로고    scopus 로고
    • Intracellular pathogens go extreme: genome evolution in the Rickettsiales
    • Darby A.C., Cho N.H., Fuxelius H.H., Westberg J., and Andersson S.G. Intracellular pathogens go extreme: genome evolution in the Rickettsiales. Trends Genet 23 (2007) 511-520
    • (2007) Trends Genet , vol.23 , pp. 511-520
    • Darby, A.C.1    Cho, N.H.2    Fuxelius, H.H.3    Westberg, J.4    Andersson, S.G.5
  • 7
  • 8
    • 0024505629 scopus 로고
    • Deletions in processed pseudogenes accumulate faster in rodents than in humans
    • Graur D., Shuali Y., and Li W.H. Deletions in processed pseudogenes accumulate faster in rodents than in humans. J Mol Evol 28 (1989) 279-285
    • (1989) J Mol Evol , vol.28 , pp. 279-285
    • Graur, D.1    Shuali, Y.2    Li, W.H.3
  • 9
    • 6344269329 scopus 로고    scopus 로고
    • The evolutionary fate of nonfunctional DNA in the bacterial endosymbiont Buchnera aphidicola
    • Gomez-Valero L., Latorre A., and Silva F.J. The evolutionary fate of nonfunctional DNA in the bacterial endosymbiont Buchnera aphidicola. Mol Biol Evol 21 (2004) 2172-2181
    • (2004) Mol Biol Evol , vol.21 , pp. 2172-2181
    • Gomez-Valero, L.1    Latorre, A.2    Silva, F.J.3
  • 10
    • 0035479142 scopus 로고    scopus 로고
    • Deletional bias and the evolution of bacterial genomes
    • Mira A., Ochman H., and Moran N.A. Deletional bias and the evolution of bacterial genomes. Trends Genet 17 (2001) 589-596
    • (2001) Trends Genet , vol.17 , pp. 589-596
    • Mira, A.1    Ochman, H.2    Moran, N.A.3
  • 11
    • 19544384334 scopus 로고    scopus 로고
    • Economy, speed and size matter: evolutionary forces driving nuclear genome miniaturization and expansion
    • Cavalier-Smith T. Economy, speed and size matter: evolutionary forces driving nuclear genome miniaturization and expansion. Ann Bot (Lond) 95 (2005) 147-175
    • (2005) Ann Bot (Lond) , vol.95 , pp. 147-175
    • Cavalier-Smith, T.1
  • 12
    • 0032508046 scopus 로고    scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C., Harris D., et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393 (1998) 537-544
    • (1998) Nature , vol.393 , pp. 537-544
    • Cole, S.T.1    Brosch, R.2    Parkhill, J.3    Garnier, T.4    Churcher, C.5    Harris, D.6
  • 13
    • 0036777599 scopus 로고    scopus 로고
    • Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
    • Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O., Peterson J., et al. Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. J Bacteriol 184 (2002) 5479-5490
    • (2002) J Bacteriol , vol.184 , pp. 5479-5490
    • Fleischmann, R.D.1    Alland, D.2    Eisen, J.A.3    Carpenter, L.4    White, O.5    Peterson, J.6
  • 15
    • 24644441020 scopus 로고    scopus 로고
    • The complete genome sequence of Mycobacterium avium subspecies paratuberculosis
    • Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D., et al. The complete genome sequence of Mycobacterium avium subspecies paratuberculosis. Proc Natl Acad Sci U S A 102 (2005) 12344-12349
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 12344-12349
    • Li, L.1    Bannantine, J.P.2    Zhang, Q.3    Amonsin, A.4    May, B.J.5    Alt, D.6
  • 17
    • 65549102914 scopus 로고    scopus 로고
    • Whole genome tiling array analysis of Mycobacterium leprae RNA reveals high expression of pseudogenes and non-coding regions
    • Akama T., Suzuki K., Tanigawa K., Kawashima A., Wu H., Nakata N., et al. Whole genome tiling array analysis of Mycobacterium leprae RNA reveals high expression of pseudogenes and non-coding regions. J Bacteriol 191 (2009) 3321-3327
    • (2009) J Bacteriol , vol.191 , pp. 3321-3327
    • Akama, T.1    Suzuki, K.2    Tanigawa, K.3    Kawashima, A.4    Wu, H.5    Nakata, N.6
  • 19
    • 0036239713 scopus 로고    scopus 로고
    • Susceptibility to Mycobacterium leprae of congenic hypertensive nude rat (SHR/NCrj-rnu) and production of cytokine from the resident peritoneal macrophages
    • Yogi Y., Endoh M., Banba T., Kobayashi M., Katoh H., Suzuki K., et al. Susceptibility to Mycobacterium leprae of congenic hypertensive nude rat (SHR/NCrj-rnu) and production of cytokine from the resident peritoneal macrophages. Jpn J Lepr 71 (2002) 39-45
    • (2002) Jpn J Lepr , vol.71 , pp. 39-45
    • Yogi, Y.1    Endoh, M.2    Banba, T.3    Kobayashi, M.4    Katoh, H.5    Suzuki, K.6
  • 20
    • 0035656688 scopus 로고    scopus 로고
    • Non-coding RNA genes and the modern RNA world
    • Eddy S.R. Non-coding RNA genes and the modern RNA world. Nat Rev Genet 2 (2001) 919-929
    • (2001) Nat Rev Genet , vol.2 , pp. 919-929
    • Eddy, S.R.1
  • 22
    • 0033568856 scopus 로고    scopus 로고
    • Neuronal expression of neural nitric oxide synthase (nNOS) protein is suppressed by an antisense RNA transcribed from an NOS pseudogene
    • Korneev S.A., Park J.H., and O'Shea M. Neuronal expression of neural nitric oxide synthase (nNOS) protein is suppressed by an antisense RNA transcribed from an NOS pseudogene. J Neurosci 19 (1999) 7711-7720
    • (1999) J Neurosci , vol.19 , pp. 7711-7720
    • Korneev, S.A.1    Park, J.H.2    O'Shea, M.3
  • 23
    • 33744940796 scopus 로고    scopus 로고
    • KLK31P is a novel androgen regulated and transcribed pseudogene of kallikreins that is expressed at lower levels in prostate cancer cells than in normal prostate cells
    • Lu W., Zhou D., Glusman G., Utleg A.G., White J.T., Nelson P.S., et al. KLK31P is a novel androgen regulated and transcribed pseudogene of kallikreins that is expressed at lower levels in prostate cancer cells than in normal prostate cells. Prostate 66 (2006) 936-944
    • (2006) Prostate , vol.66 , pp. 936-944
    • Lu, W.1    Zhou, D.2    Glusman, G.3    Utleg, A.G.4    White, J.T.5    Nelson, P.S.6
  • 25
    • 2942702193 scopus 로고    scopus 로고
    • Connexin43 pseudogene is expressed in tumor cells and inhibits growth
    • Kandouz M., Bier A., Carystinos G.D., Alaoui-Jamali M.A., and Batist G. Connexin43 pseudogene is expressed in tumor cells and inhibits growth. Oncogene 23 (2004) 4763-4770
    • (2004) Oncogene , vol.23 , pp. 4763-4770
    • Kandouz, M.1    Bier, A.2    Carystinos, G.D.3    Alaoui-Jamali, M.A.4    Batist, G.5
  • 27
    • 0036241354 scopus 로고    scopus 로고
    • DNA-PCR and RT-PCR for the 18-kDa gene of Mycobacterium leprae to assess the efficacy of multi-drug therapy for leprosy
    • Chae G.T., Kim M.J., Kang T.J., Lee S.B., Shin H.K., Kim J.P., et al. DNA-PCR and RT-PCR for the 18-kDa gene of Mycobacterium leprae to assess the efficacy of multi-drug therapy for leprosy. J Med Microbiol 51 (2002) 417-422
    • (2002) J Med Microbiol , vol.51 , pp. 417-422
    • Chae, G.T.1    Kim, M.J.2    Kang, T.J.3    Lee, S.B.4    Shin, H.K.5    Kim, J.P.6
  • 28
    • 33748779846 scopus 로고    scopus 로고
    • Evaluation of real-time and conventional PCR targeting complex 85 genes for detection of Mycobacterium leprae DNA in skin biopsy samples from patients diagnosed with leprosy
    • Martinez A.N., Britto C.F., Nery J.A., Sampaio E.P., Jardim M.R., Sarno E.N., et al. Evaluation of real-time and conventional PCR targeting complex 85 genes for detection of Mycobacterium leprae DNA in skin biopsy samples from patients diagnosed with leprosy. J Clin Microbiol 44 (2006) 3154-3159
    • (2006) J Clin Microbiol , vol.44 , pp. 3154-3159
    • Martinez, A.N.1    Britto, C.F.2    Nery, J.A.3    Sampaio, E.P.4    Jardim, M.R.5    Sarno, E.N.6
  • 29


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.