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Volumn 14, Issue 8, 2009, Pages 1029-1042

DNA conformation-dependent activities of human mitochondrial RNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; MITOCHONDRIAL RNA; MITOCHONDRIAL TRANSCRIPTION FACTOR A; MITOCHONDRIAL TRANSCRIPTION FACTOR B2; RNA POLYMERASE; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 68049107471     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/j.1365-2443.2009.01328.x     Document Type: Article
Times cited : (21)

References (39)
  • 2
    • 0015241303 scopus 로고
    • The presence of DNA molecules with a displacement loop in standard mitochondrial DNA preparations
    • Arnberg, A., van Bruggen, E.F. & Borst, P. (1971) The presence of DNA molecules with a displacement loop in standard mitochondrial DNA preparations. Biochem. Biophys. Acta 246, 353-357.
    • (1971) Biochem. Biophys. Acta , vol.246 , pp. 353-357
    • Arnberg, A.1    van Bruggen, E.F.2    Borst, P.3
  • 3
    • 33847792061 scopus 로고    scopus 로고
    • Mitochondrial transcription and its regulation in mammalian cells
    • Asin-Cayuela, J. & Gustafsson, C.M. (2007) Mitochondrial transcription and its regulation in mammalian cells. Trends Biochem. Sci. 32, 111-117.
    • (2007) Trends Biochem. Sci. , vol.32 , pp. 111-117
    • Asin-Cayuela, J.1    Gustafsson, C.M.2
  • 6
    • 0023911501 scopus 로고
    • Preference of human mitochondrial RNA polymerase for superhelical templates with mitochondrial promoters
    • Buzan, J.M. & Low, R.L. (1988) Preference of human mitochondrial RNA polymerase for superhelical templates with mitochondrial promoters. Biochem. Biophys. Res. Commun. 152, 22-29.
    • (1988) Biochem. Biophys. Res. Commun. , vol.152 , pp. 22-29
    • Buzan, J.M.1    Low, R.L.2
  • 7
    • 0007662353 scopus 로고
    • Priming of human mitochondrial DNA replication occurs at the light-strand promoter
    • Chang, D.D. & Clayton, D.A. (1985) Priming of human mitochondrial DNA replication occurs at the light-strand promoter. Proc. Natl Acad. Sci. USA 82, 351-355.
    • (1985) Proc. Natl Acad. Sci. USA , vol.82 , pp. 351-355
    • Chang, D.D.1    Clayton, D.A.2
  • 8
    • 0025885770 scopus 로고
    • Replication and transcription of vertebrate mitochondrial DNA
    • Clayton, D.A. (1991) Replication and transcription of vertebrate mitochondrial DNA. Annu. Rev. Cell Biol. 7, 453-478.
    • (1991) Annu. Rev. Cell Biol. , vol.7 , pp. 453-478
    • Clayton, D.A.1
  • 9
    • 34547621748 scopus 로고    scopus 로고
    • Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression
    • Cotney, J., Wang, Z. & Shadel, G.S. (2007) Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression. Nucleic Acids Res. 35, 4042-4054.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 4042-4054
    • Cotney, J.1    Wang, Z.2    Shadel, G.S.3
  • 10
    • 0029006975 scopus 로고
    • Human mitochondrial transcription factor A and promoter spacing integrity are required for transcription initiation
    • Dairaghi, D.J., Shadel, G.S. & Clayton, D.A. (1995a) Human mitochondrial transcription factor A and promoter spacing integrity are required for transcription initiation. Biochem. Biophys. Acta 1271, 127-134.
    • (1995) Biochem. Biophys. Acta , vol.1271 , pp. 127-134
    • Dairaghi, D.J.1    Shadel, G.S.2    Clayton, D.A.3
  • 11
    • 0029070402 scopus 로고
    • Addition of a 29 residue carboxyl-terminal tail converts a simple HMG box-containing protein into a transcriptional activator
    • Dairaghi, D.J., Shadel, G.S. & Clayton, D.A. (1995b) Addition of a 29 residue carboxyl-terminal tail converts a simple HMG box-containing protein into a transcriptional activator. J. Mol. Biol. 249, 11-28.
    • (1995) J. Mol. Biol. , vol.249 , pp. 11-28
    • Dairaghi, D.J.1    Shadel, G.S.2    Clayton, D.A.3
  • 14
    • 34548627532 scopus 로고    scopus 로고
    • DNA replication and transcription in mammalian mitochondria
    • Falkenberg, M., Larsson, N.G. & Gustafsson, C.M. (2007) DNA replication and transcription in mammalian mitochondria. Annu. Rev. Biochem. 76, 679-699.
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 679-699
    • Falkenberg, M.1    Larsson, N.G.2    Gustafsson, C.M.3
  • 17
    • 9644268985 scopus 로고    scopus 로고
    • The transcription machinery in mammalian mitochondria
    • Gaspari, M., Larsson, N.G. & Gustafsson, C.M. (2004) The transcription machinery in mammalian mitochondria. Biochim. Biophys. Acta 1659, 148-152.
    • (2004) Biophys. Acta , vol.1659 , pp. 148-152
    • Gaspari, M.1    Larsson, N.G.2    Gustafsson, C.M.3
  • 19
    • 0034598918 scopus 로고    scopus 로고
    • Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA
    • Holt, I.J., Lorimer, H.E. & Jacobs, H.T. (2000) Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA. Cell 100, 515-524.
    • (2000) Cell , vol.100 , pp. 515-524
    • Holt, I.J.1    Lorimer, H.E.2    Jacobs, H.T.3
  • 21
    • 0015117830 scopus 로고
    • A novel closed-circular mitochondrial DNA with properties of a replicating intermediate
    • Kasamatsu, H., Robberson, D.L. & Vinogard, J. (1971) A novel closed-circular mitochondrial DNA with properties of a replicating intermediate. Proc. Natl Acad. Sci. USA 68, 2252-2257.
    • (1971) Proc. Natl Acad. Sci. USA , vol.68 , pp. 2252-2257
    • Kasamatsu, H.1    Robberson, D.L.2    Vinogard, J.3
  • 22
    • 34548495323 scopus 로고    scopus 로고
    • The mitochondrial transcription factor TFAM coordinates the assembly of multiple DNA molecules into nucleoid-like structures
    • Kaufman, B.A., Durisic, N., Mativetsky, J.M., Costantino, S., Hancock, M.A., Grutter, P. & Shoubridge, E.A. (2007) The mitochondrial transcription factor TFAM coordinates the assembly of multiple DNA molecules into nucleoid-like structures. Mol. Biol. Cell 18, 3225-3236.
    • (2007) Mol. Biol. Cell , vol.18 , pp. 3225-3236
    • Kaufman, B.A.1    Durisic, N.2    Mativetsky, J.M.3    Costantino, S.4    Hancock, M.A.5    Grutter, P.6    Shoubridge, E.A.7
  • 23
    • 1542677230 scopus 로고    scopus 로고
    • TWINKLE Has 5′ → 3′ DNA helicase activity and is specifically stimulated by mitochondrial single-stranded DNA-binding protein
    • Korhonen, J.A., Gaspari, M. & Falkenberg, M. (2003) TWINKLE Has 5′ → 3′ DNA helicase activity and is specifically stimulated by mitochondrial single-stranded DNA-binding protein. J. Biol. Chem. 278, 48627-48632.
    • (2003) J. Biol. Chem. , vol.278 , pp. 48627-48632
    • Korhonen, J.A.1    Gaspari, M.2    Falkenberg, M.3
  • 26
    • 11344277076 scopus 로고    scopus 로고
    • Transient overexpression of mitochondrial transcription factor A (TFAM) is sufficient to stimulate mitochondrial DNA transcription, but not sufficient to increase mtDNA copy number in cultured cells
    • Maniura-Weber, K., Goffart, S., Garstka, H.L., Montoya, J. & Wiesner, R.J. (2004) Transient overexpression of mitochondrial transcription factor A (TFAM) is sufficient to stimulate mitochondrial DNA transcription, but not sufficient to increase mtDNA copy number in cultured cells. Nucleic Acids Res. 32, 6015-6027.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 6015-6027
    • Maniura-Weber, K.1    Goffart, S.2    Garstka, H.L.3    Montoya, J.4    Wiesner, R.J.5
  • 27
    • 0036148610 scopus 로고    scopus 로고
    • A human mitochondrial transcription factor is related to RNA adenine methyltransferases and binds S-adenosylmethionine
    • McCulloch, V., Seidel-Rogol, B.L. & Shadel, G.S. (2002) A human mitochondrial transcription factor is related to RNA adenine methyltransferases and binds S-adenosylmethionine. Mol. Cell. Biol. 22, 1116-1125.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 1116-1125
    • McCulloch, V.1    Seidel-Rogol, B.L.2    Shadel, G.S.3
  • 28
    • 34248632009 scopus 로고    scopus 로고
    • The C-terminal tail of mitochondrial transcription factor A markedly strengthens its general binding to DNA
    • Ohgaki, K., Kanki, T., Fukuoh, A., Kurisaki, H., Aoki, Y., Ikeuchi, M., Kim, S.H., Hamasaki, N. & Kang, D. (2007) The C-terminal tail of mitochondrial transcription factor A markedly strengthens its general binding to DNA. J. Biochem. 141, 201-211.
    • (2007) J. Biochem. , vol.141 , pp. 201-211
    • Ohgaki, K.1    Kanki, T.2    Fukuoh, A.3    Kurisaki, H.4    Aoki, Y.5    Ikeuchi, M.6    Kim, S.H.7    Hamasaki, N.8    Kang, D.9
  • 29
    • 0033525023 scopus 로고    scopus 로고
    • R-loop in the replication origin of human mitochondrial DNA is resolved by RecG, a Holliday junction specific helicase
    • Ohsato, T., Muta, T., Fukuoh, A., Shinagawa, H., Hamasaki, N. & Kang, D. (1999) R-loop in the replication origin of human mitochondrial DNA is resolved by RecG, a Holliday junction specific helicase. Biochem. Biophys. Res. Commun. 255, 1-5.
    • (1999) Biochem. Biophys. Res. Commun. , vol.255 , pp. 1-5
    • Ohsato, T.1    Muta, T.2    Fukuoh, A.3    Shinagawa, H.4    Hamasaki, N.5    Kang, D.6
  • 30
    • 34447537903 scopus 로고    scopus 로고
    • Ohyama, T., ed. New York, NY: Springer Science+Business Media, Inc
    • Ohyama, T., ed. (2005) DNA Conformation and Transcription. New York, NY: Springer Science+Business Media, Inc.
    • (2005) DNA Conformation and Transcription
  • 31
    • 33747639275 scopus 로고    scopus 로고
    • Conserved sequence box II directs transcription termination and primer formation in mitochondria
    • Pham, X.H., Farge, G., Shi, Y., Gaspari, M., Gustafsson, C.M. & Falkenberg, M. (2006) Conserved sequence box II directs transcription termination and primer formation in mitochondria. J. Biol. Chem. 281, 24647-24652.
    • (2006) J. Biol. Chem. , vol.281 , pp. 24647-24652
    • Pham, X.H.1    Farge, G.2    Shi, Y.3    Gaspari, M.4    Gustafsson, C.M.5    Falkenberg, M.6
  • 32
    • 0030920779 scopus 로고    scopus 로고
    • Mitochondrial DNA maintenance in vertebrates
    • Shadel, G.S. & Clayton, D.A. (1997) Mitochondrial DNA maintenance in vertebrates. Annu. Rev. Biochem. 66, 409-435.
    • (1997) Annu. Rev. Biochem. , vol.66 , pp. 409-435
    • Shadel, G.S.1    Clayton, D.A.2
  • 33
    • 0035393125 scopus 로고    scopus 로고
    • Developmentally-regulated packaging of mitochondrial DNA by the HMG-box protein mtTFA during Xenopus oogenesis
    • Shen, E.L. & Bogenhagen, D.F. (2001) Developmentally-regulated packaging of mitochondrial DNA by the HMG-box protein mtTFA during Xenopus oogenesis. Nucleic Acids Res. 29, 2822-2828.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2822-2828
    • Shen, E.L.1    Bogenhagen, D.F.2
  • 34
    • 31444454598 scopus 로고    scopus 로고
    • Bacteriophage origins of mitochondrial replication and transcription proteins
    • Shutt, T.E. & Gray, M.W. (2006) Bacteriophage origins of mitochondrial replication and transcription proteins. Trends Genet. 22, 90-95.
    • (2006) Trends Genet. , vol.22 , pp. 90-95
    • Shutt, T.E.1    Gray, M.W.2
  • 35
  • 37
    • 0022517876 scopus 로고
    • DNA primase of human mitochondria is associated with structural RNA that is essential for enzymatic activity
    • Wong, T.W. & Clayton, D.A. (1986) DNA primase of human mitochondria is associated with structural RNA that is essential for enzymatic activity. Cell 45, 817-825.
    • (1986) Cell , vol.45 , pp. 817-825
    • Wong, T.W.1    Clayton, D.A.2
  • 38
    • 0037112343 scopus 로고    scopus 로고
    • Biased incorporation of ribonucleotides on the mitochondrial L-strand accounts for apparent strand-asymmetric DNA replication
    • Yang, M.Y., Bowmaker, M., Reyes, A., Vergani, L., Angeli, P., Gringeri, E., Jacobs, H.T. & Holt, I.J. (2002) Biased incorporation of ribonucleotides on the mitochondrial L-strand accounts for apparent strand-asymmetric DNA replication. Cell 111, 495-505.
    • (2002) Cell , vol.111 , pp. 495-505
    • Yang, M.Y.1    Bowmaker, M.2    Reyes, A.3    Vergani, L.4    Angeli, P.5    Gringeri, E.6    Jacobs, H.T.7    Holt, I.J.8
  • 39
    • 33751088000 scopus 로고    scopus 로고
    • Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand
    • Yasukawa, T., Reyes, A., Cluett, T.J., Yang, M.Y., Bowmaker, M., Jacobs, H.T. & Holt, I.J. (2006) Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand. EMBO J. 25, 5358-5371.
    • (2006) EMBO J. , vol.25 , pp. 5358-5371
    • Yasukawa, T.1    Reyes, A.2    Cluett, T.J.3    Yang, M.Y.4    Bowmaker, M.5    Jacobs, H.T.6    Holt, I.J.7


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