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Volumn 84, Issue 2, 2009, Pages 202-208

Enzyme activities in the water column and in shallow permeable sediments from the northeastern Gulf of Mexico

Author keywords

carbohydrates; carbon cycling; enzymes; permeable sediments; polysaccharides; water column

Indexed keywords

ALGA; CARBON CYCLE; CYANOBACTERIUM; DIATOM; ENZYME ACTIVITY; FLUID DYNAMICS; FLUORESCENCE; HYDROLYSIS; MARINE SEDIMENT; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; MUD; ORGANIC MATTER; PERMEABILITY; PHYTOPLANKTON; POLYSACCHARIDE; REMINERALIZATION; SEDIMENT ANALYSIS; TIMESCALE; WATER COLUMN;

EID: 68049098025     PISSN: 02727714     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecss.2009.06.018     Document Type: Article
Times cited : (27)

References (44)
  • 2
    • 33845671315 scopus 로고    scopus 로고
    • Characterization of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin
    • Alderkamp A.C., van Rijssel M., and Bolhuis H. Characterization of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin. FEMS Microbiology Ecology 59 (2007) 108-117
    • (2007) FEMS Microbiology Ecology , vol.59 , pp. 108-117
    • Alderkamp, A.C.1    van Rijssel, M.2    Bolhuis, H.3
  • 3
    • 0000302658 scopus 로고
    • Production of thermostable α-amylase, pullulanase, and α-glucosidase in continuous culture by a new Clostridium isolate
    • Antranikian G., Herzberg C., and Gottschalk G. Production of thermostable α-amylase, pullulanase, and α-glucosidase in continuous culture by a new Clostridium isolate. Applied and Environmental Microbiology 53 (1987) 1668-1673
    • (1987) Applied and Environmental Microbiology , vol.53 , pp. 1668-1673
    • Antranikian, G.1    Herzberg, C.2    Gottschalk, G.3
  • 4
    • 0029472304 scopus 로고
    • Measurement of depth- and site-related differences in polysaccharide hydrolysis rates in marine sediments
    • Arnosti C. Measurement of depth- and site-related differences in polysaccharide hydrolysis rates in marine sediments. Geochimica et Cosmochimica Acta 59 (1995) 4247-4257
    • (1995) Geochimica et Cosmochimica Acta , vol.59 , pp. 4247-4257
    • Arnosti, C.1
  • 5
    • 0033898247 scopus 로고    scopus 로고
    • Substrate specificity in polysaccharide hydrolysis: contrasts between bottom water and sediments
    • Arnosti C. Substrate specificity in polysaccharide hydrolysis: contrasts between bottom water and sediments. Limnology and Oceanography 45 (2000) 1112-1119
    • (2000) Limnology and Oceanography , vol.45 , pp. 1112-1119
    • Arnosti, C.1
  • 6
    • 0038445720 scopus 로고    scopus 로고
    • Fluorescent derivatization of polysaccharides and carbohydrate-containing biopolymers for measurement of enzyme activities in complex media
    • Arnosti C. Fluorescent derivatization of polysaccharides and carbohydrate-containing biopolymers for measurement of enzyme activities in complex media. Journal of Chromatography B 793 (2003) 181-191
    • (2003) Journal of Chromatography B , vol.793 , pp. 181-191
    • Arnosti, C.1
  • 7
    • 53949089068 scopus 로고    scopus 로고
    • Functional differences between Arctic sedimentary and seawater microbial communities: contrasts in microbial hydrolysis of complex substrates
    • Arnosti C. Functional differences between Arctic sedimentary and seawater microbial communities: contrasts in microbial hydrolysis of complex substrates. FEMS Microbiology Ecology 66 (2008) 343-351
    • (2008) FEMS Microbiology Ecology , vol.66 , pp. 343-351
    • Arnosti, C.1
  • 8
    • 14844321641 scopus 로고    scopus 로고
    • Patterns of extracellular enzyme activities among pelagic marine microbial communities: implications for cycling of dissolved organic carbon
    • Arnosti C., Durkin S., and Jeffrey W.H. Patterns of extracellular enzyme activities among pelagic marine microbial communities: implications for cycling of dissolved organic carbon. Aquatic Microbial Ecology 38 (2005) 135-145
    • (2005) Aquatic Microbial Ecology , vol.38 , pp. 135-145
    • Arnosti, C.1    Durkin, S.2    Jeffrey, W.H.3
  • 9
    • 17844377909 scopus 로고    scopus 로고
    • Anoxic carbon degradation in Arctic sediments: microbial transformations of complex substrates
    • Arnosti C., Finke N., Larsen O., and Ghobrial S. Anoxic carbon degradation in Arctic sediments: microbial transformations of complex substrates. Geochimica et Cosmochimica Acta 69 (2005) 2309-2320
    • (2005) Geochimica et Cosmochimica Acta , vol.69 , pp. 2309-2320
    • Arnosti, C.1    Finke, N.2    Larsen, O.3    Ghobrial, S.4
  • 10
    • 0032853904 scopus 로고    scopus 로고
    • Carbohydrate dynamics and contributions to the carbon budget of an organic-rich coastal sediment
    • Arnosti C., and Holmer M. Carbohydrate dynamics and contributions to the carbon budget of an organic-rich coastal sediment. Geochimica et Cosmochimica Acta 63 (1999) 393-403
    • (1999) Geochimica et Cosmochimica Acta , vol.63 , pp. 393-403
    • Arnosti, C.1    Holmer, M.2
  • 12
    • 0026447373 scopus 로고
    • Bulk chemical characteristics of dissolved organic matter in the ocean
    • Benner R., Pakulski J.D., McCarthy M., Hedges J.I., and Hatcher P.G. Bulk chemical characteristics of dissolved organic matter in the ocean. Science 255 (1992) 1561-1564
    • (1992) Science , vol.255 , pp. 1561-1564
    • Benner, R.1    Pakulski, J.D.2    McCarthy, M.3    Hedges, J.I.4    Hatcher, P.G.5
  • 14
    • 68049108352 scopus 로고    scopus 로고
    • Temporal variations in microbial activities and carbon turnover in subtidal sandy sediments
    • Böer S.I., Arnosti C., van Beusekom J.J.E., and Boetius A. Temporal variations in microbial activities and carbon turnover in subtidal sandy sediments. Biogeosciences 6 (2009) 1149-1165
    • (2009) Biogeosciences , vol.6 , pp. 1149-1165
    • Böer, S.I.1    Arnosti, C.2    van Beusekom, J.J.E.3    Boetius, A.4
  • 17
    • 0021103863 scopus 로고
    • Preparation and properties of fluorescent polysaccharides
    • Glabe C.G., Harty P.K., and Rosen S.D. Preparation and properties of fluorescent polysaccharides. Analytical Biochemistry 130 (1983) 287-294
    • (1983) Analytical Biochemistry , vol.130 , pp. 287-294
    • Glabe, C.G.1    Harty, P.K.2    Rosen, S.D.3
  • 18
    • 0036761671 scopus 로고    scopus 로고
    • The continental shelf benthic ecosystem: current status, agents for change, and future prospects
    • Hall S.J. The continental shelf benthic ecosystem: current status, agents for change, and future prospects. Environmental Conservation 29 (2002) 350-374
    • (2002) Environmental Conservation , vol.29 , pp. 350-374
    • Hall, S.J.1
  • 19
    • 0024188966 scopus 로고
    • Fluxes and reactivities of organic matter in a coastal marine bay
    • Hedges J.I., Clark W.A., and Cowie G.L. Fluxes and reactivities of organic matter in a coastal marine bay. Limnology and Oceanography 35 (1988) 1137-1152
    • (1988) Limnology and Oceanography , vol.35 , pp. 1137-1152
    • Hedges, J.I.1    Clark, W.A.2    Cowie, G.L.3
  • 20
    • 0347447341 scopus 로고    scopus 로고
    • Bacterial diversity in shallow oligotrophic marine bethos and overlying waters: effects of virus infection, containment, and nutrient enrichment
    • Hewson I., Vargo G.A., and Fuhrman J.A. Bacterial diversity in shallow oligotrophic marine bethos and overlying waters: effects of virus infection, containment, and nutrient enrichment. Microbial Ecology 46 (2003) 322-336
    • (2003) Microbial Ecology , vol.46 , pp. 322-336
    • Hewson, I.1    Vargo, G.A.2    Fuhrman, J.A.3
  • 22
    • 0003030484 scopus 로고    scopus 로고
    • Porewater flow in permeable sediment
    • Boudreau B.P., and Jørgensen B.B. (Eds), Oxford University Press, Oxford
    • Huettel M., and Webster I.T. Porewater flow in permeable sediment. In: Boudreau B.P., and Jørgensen B.B. (Eds). The Benthic Boundary Layer: Transport Processes and Biogeochemistry (2000), Oxford University Press, Oxford 144-179
    • (2000) The Benthic Boundary Layer: Transport Processes and Biogeochemistry , pp. 144-179
    • Huettel, M.1    Webster, I.T.2
  • 23
    • 0028982437 scopus 로고
    • Extracellular enzyme activity: indications for high short-term variability in a coastal marine ecosystem
    • Karner M., and Rassoulzadegan F. Extracellular enzyme activity: indications for high short-term variability in a coastal marine ecosystem. Microbial Ecology 30 (1995) 143-156
    • (1995) Microbial Ecology , vol.30 , pp. 143-156
    • Karner, M.1    Rassoulzadegan, F.2
  • 24
    • 0035908651 scopus 로고    scopus 로고
    • Extracellular enzyme activity in a river-bay-shelf transect: variations in polysaccharide hydrolysis rates with substrate and size class
    • Keith S.C., and Arnosti C. Extracellular enzyme activity in a river-bay-shelf transect: variations in polysaccharide hydrolysis rates with substrate and size class. Aquatic Microbial Ecology 24 (2001) 243-253
    • (2001) Aquatic Microbial Ecology , vol.24 , pp. 243-253
    • Keith, S.C.1    Arnosti, C.2
  • 27
    • 0000318605 scopus 로고    scopus 로고
    • Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea
    • Martinez J., Smith D.C., Steward G.F., and Azam F. Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea. Aquatic Microbial Ecology 10 (1996) 223-230
    • (1996) Aquatic Microbial Ecology , vol.10 , pp. 223-230
    • Martinez, J.1    Smith, D.C.2    Steward, G.F.3    Azam, F.4
  • 28
    • 47749094350 scopus 로고    scopus 로고
    • Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico
    • Mills H.J., Hunter E., Humphrys M., Kerkhof L., McGuinness L., Huettel M., and Kostka J.E. Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico. Applied and Environmental Microbiology 74 (2008) 4440-4453
    • (2008) Applied and Environmental Microbiology , vol.74 , pp. 4440-4453
    • Mills, H.J.1    Hunter, E.2    Humphrys, M.3    Kerkhof, L.4    McGuinness, L.5    Huettel, M.6    Kostka, J.E.7
  • 29
    • 42149109666 scopus 로고    scopus 로고
    • Enzymatic activity and organic substrates on a sandy beach of the Ligurian Sea (NW Mediterranean) influenced by anthropogenic pressure
    • Misic C., and Harriague A.C. Enzymatic activity and organic substrates on a sandy beach of the Ligurian Sea (NW Mediterranean) influenced by anthropogenic pressure. Aquatic Microbial Ecology 47 (2007) 293-300
    • (2007) Aquatic Microbial Ecology , vol.47 , pp. 293-300
    • Misic, C.1    Harriague, A.C.2
  • 30
    • 42149191959 scopus 로고    scopus 로고
    • Microbial dynamics in autotrophic and heterotropic seawater mesocosms: II. Bacterioplankton community structure and hydrolytic enzyme activities
    • Murray A.E., Arnosti C., De La Rocha C., Grossart H.P., and Passow U. Microbial dynamics in autotrophic and heterotropic seawater mesocosms: II. Bacterioplankton community structure and hydrolytic enzyme activities. Aquatic Microbial Ecology 49 (2007) 123-141
    • (2007) Aquatic Microbial Ecology , vol.49 , pp. 123-141
    • Murray, A.E.1    Arnosti, C.2    De La Rocha, C.3    Grossart, H.P.4    Passow, U.5
  • 32
    • 84986870589 scopus 로고
    • The use of DAPI for identifying and counting aquatic microflora
    • Porter K.G., and Feig Y.S. The use of DAPI for identifying and counting aquatic microflora. Limnology and Oceanography 25 (1980) 943-948
    • (1980) Limnology and Oceanography , vol.25 , pp. 943-948
    • Porter, K.G.1    Feig, Y.S.2
  • 33
    • 0042884058 scopus 로고    scopus 로고
    • Activity and distribution of bacterial populations in Middle Atlantic Bight shelf sands
    • Rusch A., Huettel M., Reimers C.E., Taghon G.L., and Fuller C.M. Activity and distribution of bacterial populations in Middle Atlantic Bight shelf sands. FEMS Microbiology Ecology 44 (2003) 89-100
    • (2003) FEMS Microbiology Ecology , vol.44 , pp. 89-100
    • Rusch, A.1    Huettel, M.2    Reimers, C.E.3    Taghon, G.L.4    Fuller, C.M.5
  • 34
    • 68049104184 scopus 로고    scopus 로고
    • Slow decay of extracellular phosphatase, b-glucosidase, and leucine aminopeptidase in Arctic seawater
    • submitted for publication
    • Steen, A.D., Arnosti, C. Slow decay of extracellular phosphatase, b-glucosidase, and leucine aminopeptidase in Arctic seawater. Limnology and Oceanography, submitted for publication.
    • Limnology and Oceanography
    • Steen, A.D.1    Arnosti, C.2
  • 35
    • 44949222390 scopus 로고    scopus 로고
    • Dynamics of high molecular weight dissolved organic carbon in the Chesapeake Bay: insights from enzyme activities, carbohydrate concentrations, and microbial metabolism
    • Steen A.D., Hamdan L., and Arnosti C. Dynamics of high molecular weight dissolved organic carbon in the Chesapeake Bay: insights from enzyme activities, carbohydrate concentrations, and microbial metabolism. Limnology and Oceanography 53 (2008) 936-946
    • (2008) Limnology and Oceanography , vol.53 , pp. 936-946
    • Steen, A.D.1    Hamdan, L.2    Arnosti, C.3
  • 36
    • 0032963894 scopus 로고    scopus 로고
    • Biphasic extracellular proteolytic enzyme activity in benthic water and sediment in the northwestern Mediterranean Sea
    • Tholosan O., Lamy F., Garcin J., Polychronaki T., and Bianchi A. Biphasic extracellular proteolytic enzyme activity in benthic water and sediment in the northwestern Mediterranean Sea. Applied and Environmental Microbiology 65 (1999) 1619-1626
    • (1999) Applied and Environmental Microbiology , vol.65 , pp. 1619-1626
    • Tholosan, O.1    Lamy, F.2    Garcin, J.3    Polychronaki, T.4    Bianchi, A.5
  • 37
    • 0022649626 scopus 로고
    • Microscopic enumeration of attached marine bacteria of seawater, marine sediment, fecal matter, and kelp blade samples following pyrophosphate and ultrasound treatments
    • Velji M.I., and Albright L.J. Microscopic enumeration of attached marine bacteria of seawater, marine sediment, fecal matter, and kelp blade samples following pyrophosphate and ultrasound treatments. Canadian Journal of Microbiology 32 (1986) 121-126
    • (1986) Canadian Journal of Microbiology , vol.32 , pp. 121-126
    • Velji, M.I.1    Albright, L.J.2
  • 38
    • 0031840704 scopus 로고    scopus 로고
    • A predictive model of bacterial foraging by means of freely released extracellular enzymes
    • Vetter Y.A., Deming J.W., Jumars P.A., and Krieger-Brockett B.B. A predictive model of bacterial foraging by means of freely released extracellular enzymes. Microbial Ecology 36 (1998) 75-92
    • (1998) Microbial Ecology , vol.36 , pp. 75-92
    • Vetter, Y.A.1    Deming, J.W.2    Jumars, P.A.3    Krieger-Brockett, B.B.4
  • 39
    • 0029843079 scopus 로고    scopus 로고
    • Microbial hydrolysis of polysaccharides
    • Warren R.A.J. Microbial hydrolysis of polysaccharides. Annual Review of Microbiology 50 (1996) 183-212
    • (1996) Annual Review of Microbiology , vol.50 , pp. 183-212
    • Warren, R.A.J.1
  • 40
    • 0025345316 scopus 로고
    • The three-dimensional structure of porin from Rhodobacter capsulatus at 3 Å resolution
    • Weiss M.S., Wacker T., Weckesser J., Welte W., and Schulz G.E. The three-dimensional structure of porin from Rhodobacter capsulatus at 3 Å resolution. FEBS Letters 267 (1990) 268-272
    • (1990) FEBS Letters , vol.267 , pp. 268-272
    • Weiss, M.S.1    Wacker, T.2    Weckesser, J.3    Welte, W.4    Schulz, G.E.5
  • 41
    • 52149110147 scopus 로고    scopus 로고
    • Grain size and depositional environment as predictors of permeability in coastal marine sands
    • Wilson A.M., Huettel M., and Klein S. Grain size and depositional environment as predictors of permeability in coastal marine sands. Estuarine, Coastal and Shelf Science 80 (2008) 193-199
    • (2008) Estuarine, Coastal and Shelf Science , vol.80 , pp. 193-199
    • Wilson, A.M.1    Huettel, M.2    Klein, S.3
  • 42
    • 33947577875 scopus 로고    scopus 로고
    • Surface associations of enzymes and organic matter: consequences for hydrolytic activity and organic matter remineralization in marine systems
    • Ziervogel K., Karlsson E., and Arnosti C. Surface associations of enzymes and organic matter: consequences for hydrolytic activity and organic matter remineralization in marine systems. Marine Chemistry 104 (2007) 241-252
    • (2007) Marine Chemistry , vol.104 , pp. 241-252
    • Ziervogel, K.1    Karlsson, E.2    Arnosti, C.3
  • 43
    • 38049120268 scopus 로고    scopus 로고
    • Polysaccharide hydrolysis in aggregates and free enzyme activity in aggregate-free seawater from the northeastern Gulf of Mexico
    • Ziervogel K., and Arnosti C. Polysaccharide hydrolysis in aggregates and free enzyme activity in aggregate-free seawater from the northeastern Gulf of Mexico. Environmental Microbiology 10 (2008) 289-299
    • (2008) Environmental Microbiology , vol.10 , pp. 289-299
    • Ziervogel, K.1    Arnosti, C.2
  • 44
    • 68049113380 scopus 로고    scopus 로고
    • Enzyme activities in the Delaware Estuary affected by elevated suspended sediment load
    • Ziervogel K., and Arnosti C. Enzyme activities in the Delaware Estuary affected by elevated suspended sediment load. Estuarine, Coastal and Shelf Science 84 2 (2009) 253-258
    • (2009) Estuarine, Coastal and Shelf Science , vol.84 , Issue.2 , pp. 253-258
    • Ziervogel, K.1    Arnosti, C.2


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