메뉴 건너뛰기




Volumn 41, Issue 3, 2009, Pages 247-253

DSN depletion is a simple method to remove selected transcripts from cDNA populations

Author keywords

CDNA depletion; Duplex specific nuclease; Expression cloning; Full length cDNA; Kamchatka crab

Indexed keywords

CDNA DEPLETION; DUPLEX-SPECIFIC NUCLEASE; EXPRESSION CLONING; FULL-LENGTH CDNA; KAMCHATKA CRAB;

EID: 67949114345     PISSN: 10736085     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12033-008-9131-y     Document Type: Article
Times cited : (19)

References (22)
  • 1
    • 33845306470 scopus 로고    scopus 로고
    • Genomic approaches to early embryogenesis and stem cell biology
    • DOI 10.1055/s-2006-952155
    • K Aiba MG Carter R Matoba MS Ko 2006 Genomic approaches to early embryogenesis and stem cell biology Seminars in Reproductive Medicine 24 5 330 339 10.1055/s-2006-952155 10.1055/s-2006-952155 1:CAS:528:DC%2BD2sXisVSlsA%3D%3D (Pubitemid 44877576)
    • (2006) Seminars in Reproductive Medicine , vol.24 , Issue.5 , pp. 330-339
    • Aiba, K.1    Carter, M.G.2    Matoba, R.3    Ko, M.S.H.4
  • 2
    • 17044373269 scopus 로고    scopus 로고
    • Finding the target after screening the phenotype
    • 10.1016/S1359-6446(05)03415-X 10.1016/S1359-6446(05)03415-X 1:CAS:528:DC%2BD2MXivV2hs7Y%3D
    • CP Hart 2005 Finding the target after screening the phenotype Drug Discovery Today 10 7 513 519 10.1016/S1359-6446(05)03415-X 10.1016/S1359- 6446(05)03415-X 1:CAS:528:DC%2BD2MXivV2hs7Y%3D
    • (2005) Drug Discovery Today , vol.10 , Issue.7 , pp. 513-519
    • Hart, C.P.1
  • 3
    • 9144250267 scopus 로고    scopus 로고
    • Identification of human tumor antigens and its implications for diagnosis and treatment of cancer
    • DOI 10.1111/j.1349-7006.2004.tb02182.x
    • Y Kawakami T Fujita Y Matsuzaki T Sakurai M Tsukamoto M Toda H Sumimoto 2004 Identification of human tumor antigens and its implications for diagnosis and treatment of cancer Cancer Science 95 10 784 791 10.1111/j.1349-7006.2004. tb02182.x 10.1111/j.1349-7006.2004.tb02182.x 1:CAS:528:DC%2BD2cXhtFarsrbJ (Pubitemid 39545583)
    • (2004) Cancer Science , vol.95 , Issue.10 , pp. 784-791
    • Kawakami, Y.1    Fujita, T.2    Matsuzaki, Y.3    Sakurai, T.4    Tsukamoto, M.5    Toda, M.6    Sumimoto, H.7
  • 5
    • 0345051044 scopus 로고    scopus 로고
    • Normalization and subtraction: Two approaches to facilitate gene discovery
    • 10.1101/gr.6.9.791 10.1101/gr.6.9.791 1:CAS:528:DyaK28XlvF2ns7Y%3D
    • MF Bonaldo G Lennon MB Soares 1996 Normalization and subtraction: Two approaches to facilitate gene discovery Genome Research 6 791 806 10.1101/gr.6.9.791 10.1101/gr.6.9.791 1:CAS:528:DyaK28XlvF2ns7Y%3D
    • (1996) Genome Research , vol.6 , pp. 791-806
    • Bonaldo, M.F.1    Lennon, G.2    Soares, M.B.3
  • 7
    • 0025782224 scopus 로고
    • A simple and efficient cDNA library subtraction procedure, Isolation of human retina-specific cDNA clones
    • 10.1093/nar/19.8.1954 10.1093/nar/19.8.1954 1:CAS:528:DyaK3MXksVensLc%3D
    • A Swaroop J Xu N Agarwal SM Weissman 1991 A simple and efficient cDNA library subtraction procedure, Isolation of human retina-specific cDNA clones Nucleic Acids Research 19 1954 10.1093/nar/19.8.1954 10.1093/nar/19.8.1954 1:CAS:528:DyaK3MXksVensLc%3D
    • (1991) Nucleic Acids Research , vol.19 , pp. 1954
    • Swaroop, A.1    Xu, J.2    Agarwal, N.3    Weissman, S.M.4
  • 8
    • 0033791308 scopus 로고    scopus 로고
    • Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-lenght cDNA libraries for rapid discovery of new genes
    • DOI 10.1101/gr.145100
    • P Carninci Y Shibata N Hayatsu Y Sugahara K Shibata M Itoh H Konno Y Okazaki M Muramatsu Y Hayashizaki 2000 Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes Genome Research 10 1617 1630 10.1101/gr.145100 10.1101/gr.145100 1:CAS:528:DC%2BD3cXns1Shsr0%3D (Pubitemid 30799137)
    • (2000) Genome Research , vol.10 , Issue.10 , pp. 1617-1630
    • Carninci, P.1    Shibata, Y.2    Hayatsu, N.3    Sugahara, Y.4    Shibata, K.5    Itoh, M.6    Konno, H.7    Okazaki, Y.8    Muramatsu, M.9    Hayashizaki, Y.10
  • 12
    • 39449121572 scopus 로고    scopus 로고
    • Normalization of full-length enriched cDNA
    • DOI 10.1039/b715110c
    • EA Bogdanova DA Shagin SA Lukyanov 2008 Normalization of full-length enriched cDNA Molecular BioSystems 4 3 205 212 10.1039/b715110c 10.1039/b715110c 1:CAS:528:DC%2BD1cXitVKmtbo%3D (Pubitemid 351272680)
    • (2008) Molecular BioSystems , vol.4 , Issue.3 , pp. 205-212
    • Bogdanova, E.A.1    Shagin, D.A.2    Lukyanov, S.A.3
  • 13
    • 29244485905 scopus 로고    scopus 로고
    • Application of the duplex-specific nuclease preference method to the analysis of single nucleotide polymorphisms in human genes
    • DOI 10.1007/s11171-005-0078-5
    • IM Al'tshuler PA Zhulidov EA Bogdanova NN Mudrik DA Shagin 2005 Application of the duplex-specific nuclease preference method to the analysis of point mutations in human genes Russian Journal of Bioorganic Chemistry 31 6 567 575 10.1007/s11171-005-0078-5 10.1007/s11171-005-0078-5 1:CAS:528: DC%2BD2MXhtlClu7bF (Pubitemid 41831018)
    • (2005) Russian Journal of Bioorganic Chemistry , vol.31 , Issue.6 , pp. 567-575
    • Altshuler, I.M.1    Zhulidov, P.A.2    Bogdanova, E.A.3    Mudrik, N.N.4    Shagin, D.A.5
  • 14
    • 39449091639 scopus 로고    scopus 로고
    • Quantitative telomeric overhang determination using a double-strand specific nuclease
    • DOI 10.1093/nar/gkm1063
    • Y Zhao H Hoshiyama JW Shay WE Wright 2008 Quantitative telomeric overhang determination using a double-strand specific nuclease Nucleic Acids Research 36 3 e14 10.1093/nar/gkm1063 10.1093/nar/gkm1063 (Pubitemid 351267258)
    • (2008) Nucleic Acids Research , vol.36 , Issue.3
    • Zhao, Y.1    Hoshiyama, H.2    Shay, J.W.3    Wright, W.E.4
  • 15
    • 0037977726 scopus 로고    scopus 로고
    • Amplification of representative cDNA pools from microscopic amounts of animal tissue
    • 1:CAS:528:DC%2BD3sXitFKnsb0%3D
    • MV Matz 2003 Amplification of representative cDNA pools from microscopic amounts of animal tissue Methods in Molecular Biology (Clifton N.J.) 221 103 116 1:CAS:528:DC%2BD3sXitFKnsb0%3D
    • (2003) Methods in Molecular Biology (Clifton N.J.) , vol.221 , pp. 103-116
    • Matz, M.V.1
  • 16
    • 0028211009 scopus 로고
    • PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates
    • 10.1073/pnas.91.6.2216 10.1073/pnas.91.6.2216 1:CAS:528: DyaK2cXivFSqsL8%3D
    • WM Barnes 1994 PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates Proceedings of the National Academy of Sciences of the United States of America 91 2216 2220 10.1073/pnas.91.6.2216 10.1073/pnas.91.6.2216 1:CAS:528:DyaK2cXivFSqsL8%3D
    • (1994) Proceedings of the National Academy of Sciences of the United States of America , vol.91 , pp. 2216-2220
    • Barnes, W.M.1
  • 17
    • 0004186080 scopus 로고
    • Quantitative analysis of solution hybridisation
    • B.D. Hames S.J. Higgins (eds). IRL Press Oxford-Washington DC
    • Young, B. D., & Anderson, M. (1985). Quantitative analysis of solution hybridisation. In B. D. Hames & S. J. Higgins (Eds.), Nucleic acids hybridisation, a practical approach (pp. 47-71). Oxford-Washington DC: IRL Press.
    • (1985) Nucleic Acids Hybridisation, A Practical Approach , pp. 47-71
    • Young, B.D.1    Anderson, M.2
  • 18
    • 0033559113 scopus 로고    scopus 로고
    • Amplification of cDNA ends based on template-switching effect and step-out PCR
    • DOI 10.1093/nar/27.6.1558
    • M Matz D Shagin E Bogdanova O Britanova S Lukyanov L Diatchenko A Chenchik 1999 Amplification of cDNA ends based on template-switching effect and step-out PCR Nucleic Acids Research 27 6 1558 1560 10.1093/nar/27.6.1558 10.1093/nar/27.6.1558 1:CAS:528:DyaK1MXitFenurY%3D (Pubitemid 29206302)
    • (1999) Nucleic Acids Research , vol.27 , Issue.6 , pp. 1558-1560
    • Matz, M.1    Shagin, D.2    Bogdanova, E.3    Britanova, O.4    Lukyanov, S.5    Diatchenko, L.6    Chenchik, A.7
  • 19
    • 0035046755 scopus 로고    scopus 로고
    • Reverse transcriptase template switching, a SMART approach for full-length cDNA library construction
    • 1:CAS:528:DC%2BD3MXivVKis7o%3D
    • YY Zhu EM Machleder A Chenchik R Li PD Siebert 2001 Reverse transcriptase template switching, a SMART approach for full-length cDNA library construction BioTechniques 30 892 897 1:CAS:528:DC%2BD3MXivVKis7o%3D
    • (2001) BioTechniques , vol.30 , pp. 892-897
    • Zhu, Y.Y.1    MacHleder, E.M.2    Chenchik, A.3    Li, R.4    Siebert, P.D.5
  • 20
    • 0030586931 scopus 로고    scopus 로고
    • Equalizing cDNA subtraction based on selective suppression of polymerase chain reaction: Cloning of Jurkat cell transcripts induced by phytohemaglutinin and phorbol 12-myristate 13-acetate
    • DOI 10.1006/abio.1996.0334
    • NG Gurskaya L Diatchenko A Chenchik PD Siebert GL Khaspekov KA Lukyanov LL Vagner OD Ermolaeva SA Lukyanov ED Sverdlov 1996 Equalizing cDNA subtraction based on selective suppression of polymerase chain reaction: cloning of Jurkat cell transcripts induced by phytohemaglutinin and phorbol 12-myristate 13-acetate Analytical Biochemistry 240 1 90 97 10.1006/abio.1996.0334 10.1006/abio.1996.0334 1:CAS:528:DyaK28XlslSlsro%3D (Pubitemid 26292926)
    • (1996) Analytical Biochemistry , vol.240 , Issue.1 , pp. 90-97
    • Gurskaya, N.G.1    Diatchenko, L.2    Chenchik, A.3    Siebert, P.D.4    Khaspekov, G.L.5    Lukyanov, K.A.6    Vagner, L.L.7    Ermolaeva, O.D.8    Lukyanov, S.A.9    Sverdlov, E.D.10
  • 21
    • 0028802726 scopus 로고
    • Cyclic nucleotide phosphodiesterases: Functional implications of multiple isoforms
    • 1:CAS:528:DyaK28XlvVyj
    • JA Beavo 1995 Cyclic nucleotide phosphodiesterases: Functional implications of multiple isoforms Physiological Reviews 75 725 748 1:CAS:528:DyaK28XlvVyj
    • (1995) Physiological Reviews , vol.75 , pp. 725-748
    • Beavo, J.A.1
  • 22
    • 0029146718 scopus 로고
    • Diversity in cyclic nucleotide phosphodiesterase isoenzyme families
    • 10.1006/abbi.1995.1429 10.1006/abbi.1995.1429 1:CAS:528: DyaK2MXotVyqtr8%3D
    • VC Manganiello T Murata M Taira P Belfrage E Degerman 1995 Diversity in cyclic nucleotide phosphodiesterase isoenzyme families Archives of Biochemistry and Biophysics 322 1 1 13 10.1006/abbi.1995.1429 10.1006/abbi.1995.1429 1:CAS:528:DyaK2MXotVyqtr8%3D
    • (1995) Archives of Biochemistry and Biophysics , vol.322 , Issue.1 , pp. 1-13
    • Manganiello, V.C.1    Murata, T.2    Taira, M.3    Belfrage, P.4    Degerman, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.