Achieving clinical statement interoperability using R-MIM and archetype-based semantic transformations

IEEE Transactions on Information Technology in Biomedicine

Volumn 13, Issue 4, 2009, Pages 467-477

  Kilic, Ozgur ^a   Dogac, Asuman ^a  

^a MIDDLE EAST TECHNICAL UNIVERSITY   (Turkey)

Author keywords

Archetypes; Clinical document sharing; EHealth; EHRcom; Health Level Seven (HL7) clinical document architecture (CDA); Integrating healthcare enterprise (IHE) profiles; Semantic interoperability

Indexed keywords

ARCHETYPES; CLINICAL DOCUMENT SHARING; EHEALTH; EHRCOM; INTEGRATING HEALTHCARE ENTERPRISE (IHE) PROFILES; SEMANTIC INTEROPERABILITY;

HEALTH; HEALTH CARE; INFORMATION DISSEMINATION; INTEROPERABILITY; MIM DEVICES; ONTOLOGY; PLASTICS MOLDING MACHINES; RECORDS MANAGEMENT; SECURITY OF DATA;

SEMANTICS;

ALGORITHM; ARTICLE; LINGUISTICS; MEDICAL RECORD; METHODOLOGY; SEMANTICS; SYSTEM ANALYSIS; THEORETICAL MODEL;

ALGORITHMS; MEDICAL RECORD LINKAGE; MEDICAL RECORDS SYSTEMS, COMPUTERIZED; MODELS, THEORETICAL; SEMANTICS; SYSTEMS INTEGRATION; VOCABULARY, CONTROLLED;

EID: 67749116595     PISSN: 10897771     EISSN: None     Source Type: Journal    
DOI: 10.1109/TITB.2008.904647     Document Type: Conference Paper

References (45)

1. Federal Health Information Technology [Online]. Available: http:// www.hhs.gov/healthit
2. Canada Health Infoway [Online]. Available: http:// www.infowayinforoute.ca/
3. RIDE Deliverable 2.1.1 European Best practices [Online]. Available: http://www.srdc.metu.edu.tr/webpage/projects/ride/ modules.php?name=Calendar
4. HL7 Version 3 Standard: Clinical Statement Pattern, Release 1 [Online]. Available: http://www.hl7.org/v3ballot/html/domains/uvcs/uvcs.htm
5. HL7 Clinical Document Architecture, Release 2 [Online]. Available: http://www.hl7.org/v3ballot/html/infrastructure/cda/cda.htm
6. CEN/TC 251, EN 13606-1, Health Informatics - Electronic Health Record Communication - Part 1: ReferenceModel. (2009, May 19). [Online]. Available: http://www.chime.ucl.ac.uk/resources/CEN/EN13606-1/ N06-02_prEN13606-1_20060209.pdf
7. openEHR Community [Online]. Available: http://www.openehr.org/
8. IHE IT Infrastructure Integration Profiles [Online]. Available: http:// www.ihe.net/
9. IHE ITI Technical Committee. (Aug. 15, 2005). IHE IT Infrastructure echnical Framework, vol. 1, Integration Profiles, Revision 2.0 Final Text [Online]. Available: http://www.ihe.net/Technical_Framework/upload/ ihe_iti_tf_2.0_vol1_FT_2005-08-15.pdf
10. A. Dogac, G. Laleci, T. Aden, and M. Eichelberg, "Enhancing IHE XDS for federated clinical affinity domain support," IEEE Trans. Inf. Technol. Biomed., vol. 11, no. 2, pp. 213-221, Mar. 2007.
11. IHE Cross Community Information Exchange including Federation of XDS Affinity Domains [Online]. Available: http://www.ihe.net/ Technical_Framework/upload/IHE_ITI_TF_White_Paper_Cross_ Community_PC_2006_08_15.pdf
12. HL7 Reference Information Model [Online]. Available: http://www.hl7.org/ v3ballot/html/infrastructure/rim/rim.htm
13. HL7 Refinement, Constraint and Localization, Release 2 [Online]. Available: http://www.hl7.org/v3ballot/html/infrastructure/conformance/ conformance.htm
14. EHRcom 13606 D-MIM [Online]. Available: http://www.hl7.org/Library/ Committees/structure/CEN%5F13606%5FEHR%5Fmodel%2Ezip
15. HL7 Development Framework (HDF) [Online]. Available: http://www.hl7.org/ v3ballot/html/help/hdf/hdf.htm
16. T. Beale and S. Heard. (2009, May 19). Archetype definitions and principles (Revision 0.6) [Online]. Available: http://www.openehr.org/ releases/1.0.2/architecture/am/archetype_principles.pdf
17. Appendix to: Achieving Clinical Statement Interoperability Using RMIM and Archetype-Based Semantic Transformations [Online]. Available: http:// www.srdc.metu.edu.tr/webpage/links/appendix.pdf
18. American National Standards Institute [Online]. Available: http:// www.ansi.org/
19. R. H. Dolin, L. Alschuler, S. Boyer, C. Beebe, F. M. Behlen, P. V. Biron, and A. Shabo, "HL7 clinical document architecture, release 2," J. Amer. Med. Inf. Assoc., vol. 13, no. 1, pp. 30-39, Jan./Feb. 2006.
20. CEN TC/251 (European Standardization of Health Informatics) ENV 13606 Electronic Health Record Communication. (2009, May 19). [Online]. Available: http://cen.iso.org/
21. SNOMED (Systematized Nomenclature of Medicine) Clinical Terms. (2009, May 19). [Online]. Available: http://www.ihtsdo.org/snomed-ct/
22. Logical Observation Identifiers Names and Codes (LOINC) [Online]. Available: http://www.loinc.org
23. Archetype Definition LanguageVersion 2. (2009, May 19). [Online].Available: http://www.openehr.org/releases/1.0.2/architecture/ am/adl2.pdf
24. Complete Blood Picture Archetype ADL Definition. (2009, May 19). [Online].Available: http://www.openehr.org/wsvn/knowledge/archetypes/dev/ adl/openehr/ehr/entry/observation/openEHR-EHR-OBSERVATION. blood_film.v1.adl?op=file&rev=0&sc=0
25. Web Ontology Language (OWL) [Online]. Available: http://www.w3.org/TR/ owl-features/
26. DAML+OIL Reference Description. (Dec. 2001). [Online]. Available: W3C Note, http://www.w3.org/TR/daml+oil-reference
27. RDFVocabularyDescription Language 1.0: RDF Schema [Online].Available: http://www.w3.org/TR/rdf-schema/
28. RDF/XML Syntax Specification (Revised) [Online]. Available: http:// www.w3.org/TR/2004/REC-rdf-syntax-grammar-20040210/
29. I. Horrocks, "DAML+OIL: A description logic for the semantic web," IEEE Data Eng. Bull., vol. 25, no. 1, pp. 4-9, Mar. 2002.
30. OWL representation of the HL7 RIM, CDA R-MIM and EHRcom R-MIM [Online]. Available: http://www.srdc.metu.edu.tr/webpage/links
31. HL7 Standard Version 3 Templates 3.3, Health Level Seven Template Special Interest Group, 2005
32. O. Kilic, V. Bicer, and A. Dogac. (Jun. 2005). Mapping Archetypes to OWL [Online]. Available: http://www.srdc.metu.edu.tr/webpage/publications/ 2005/MappingArchetypestoOWLTechnical.pdf
33. A. Dogac, G. Laleci, Y. Kabak, S. Unal, T. Beale, S. Heard, P. Elkin, F. Najmi, C. Mattocks, D.Webber, andM. Kernberg, "Exploiting ebXML registry semantic constructs for handling archetype metadata in healthcare informatics," Int. J. Metadata, Semantics Ontol., vol. 1, no. 1, pp. 21-36, 2006.
34. M. T. Pazienza, A. Stellato, M. Vindigni, and F. M. Zanzotto, "XeOML: An XML-based extensible ontology mapping language," presented at the Workshop Meaning Coordination Negotiation, held in Conjunction with 3rd Int. Semantic Web Conf. (ISWC 2004), Hiroshima, Japan, Nov. 2004.
35. V. Bicer, G. Laleci, A. Dogac, and Y. Kabak, "Artemis message exchange framework: Semantic interoperability of exchanged messages in the healthcare domain," ACM Sigmod Rec., vol. 34, no. 3, pp. 71-76, Sep. 2005.
36. V. Bicer, O. Kilic, A. Dogac, and G. Laleci, "Archetype-based semantic interoperability of web service messages in the healthcare domain," Int. J. Semantic Web Inf. Syst., vol. 1, no. 4, pp. 1-22, Oct. 2005.
37. HL7 Common Message Element Types [Online]. Available: http://www.hl7.org/ v3ballot/html/domains/uvct/uvct.htm
38. CEN prEN 14822-1, General purpose information components, Draft European Standard prEN 14822-1, European Committee for Standardization, 2003.
39. HL7 Implementation Guide for 13606 [Online]. Available: http:// www.hl7.org.uk/repository/uploads/402/1/ HL7%20Implementation%20Guide%20for%2013606%20scopev0r6.doc
40. C. E. Kuziemsky and F. Lau, "Ontology-based information integration in health care: A focus on palliative care," in Proc. 11th Annu. Int. Workshop Softw. Technol. Eng. Practice (STEP 2004), pp. 164-172.
41. RIDE Deliverable 2.3.1 Requirement Analysis for the RIDE Roadmap [Online]. Available: http://www.srdc.metu.edu.tr/webpage/projects/ride/ modules.php?name=Calendar
42. D. A. Lindberg, B. L.Humphreys, and A. T. McCray, "The unified medical language system," Methods Inf. Med., vol. 32, pp. 281-291, 1993.
43. A. Rector,W. A. Nowlan, and A. Glowinski, "Goals for concept representation in the GALEN project," in Proc. 17th Annu. Symp. Comput. Appl. Med. Care (SCAMC 1993), pp. 414-418.
44. A. Rector, S. Bechhofer, C. A. Goble, I. Horrocks, W. A. Nowlan, and W. D. Solomon, "The GRAIL concept modeling language for medical terminology," Artif. Intell. Med., vol. 9, pp. 139-171, 1997.
45. M. Eichelberg, T. Aden, J. Riesmeier, A. Dogac, and G. Laleci, "A survey and analysis of electronic healthcare record standards," ACM Comput. Surv., vol. 37, no. 4, pp. 277-315, Dec. 2005.