메뉴 건너뛰기




Volumn 74, Issue 2, 2009, Pages 129-141

Methods for computer-aided chemical biology. Part 5: Rationalizing the selectivity of cathepsin inhibitors on the basis of molecular fragments and topological feature distributions

Author keywords

Cathepsin inhibitors; Chemical biology; Chemoinformatics; Compound selectivity; Layered atom environments; Molecular fragmentation; Structural features; Structure selectivity relationships

Indexed keywords

BIOLOGICAL MARKER; CATHEPSIN; CATHEPSIN INHIBITOR; CYSTEINE PROTEINASE INHIBITOR; THIOL PROTEINASE; UNCLASSIFIED DRUG;

EID: 67651250811     PISSN: 17470277     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1747-0285.2009.00848.x     Document Type: Article
Times cited : (3)

References (15)
  • 1
    • 34548317031 scopus 로고    scopus 로고
    • Chemogenomic approaches to rational drug design
    • Rognan D. (2007) Chemogenomic approaches to rational drug design. British J Pharmacol 152 : 38 42.
    • (2007) British J Pharmacol , vol.152 , pp. 38-42
    • Rognan, D.1
  • 2
    • 1842532337 scopus 로고    scopus 로고
    • Chemogenomics: An emerging strategy for rapid target and drug discovery
    • Bredel M., Jacoby E. (2004) Chemogenomics: an emerging strategy for rapid target and drug discovery. Nat Rev Genet 5 : 262 275.
    • (2004) Nat Rev Genet , vol.5 , pp. 262-275
    • Bredel, M.1    Jacoby, E.2
  • 3
    • 43949145741 scopus 로고    scopus 로고
    • Computational analysis of ligand relationships within target families
    • Bajorath J. (2008) Computational analysis of ligand relationships within target families. Curr Opin Chem Biol 12 : 352 358.
    • (2008) Curr Opin Chem Biol , vol.12 , pp. 352-358
    • Bajorath, J.1
  • 4
    • 58049191116 scopus 로고    scopus 로고
    • Computational approaches in chemogenomics and chemical biology: Current and future impact on drug discovery
    • Bajorath J. (2008) Computational approaches in chemogenomics and chemical biology: current and future impact on drug discovery. Expert Opin Drug Discov 3 : 1371 1376.
    • (2008) Expert Opin Drug Discov , vol.3 , pp. 1371-1376
    • Bajorath, J.1
  • 5
    • 54249155522 scopus 로고    scopus 로고
    • Network pharmacology: The next paradigm in drug discovery
    • Hopkins A.L. (2008) Network pharmacology: the next paradigm in drug discovery. Nature Chem Biol 4 : 682 690.
    • (2008) Nature Chem Biol , vol.4 , pp. 682-690
    • Hopkins, A.L.1
  • 6
    • 34548180374 scopus 로고    scopus 로고
    • Methods for computer-aided chemical biology. Part 1: Design of a benchmark system for the evaluation of compound selectivity
    • DOI 10.1111/j.1747-0285.2007.00554.x
    • Stumpfe D., Ahmed H.E.A., Vogt I., Bajorath J. (2007) Methods for computer-aided chemical biology. Part 1: design of a benchmark system for the evaluation of compound selectivity. Chem Biol Drug Des 70 : 182 194. (Pubitemid 47305402)
    • (2007) Chemical Biology and Drug Design , vol.70 , Issue.3 , pp. 182-194
    • Stumpfe, D.1    Ahmed, H.E.A.2    Vogt, I.3    Bajorath, J.4
  • 7
    • 34548168343 scopus 로고    scopus 로고
    • Methods for computer-aided chemical biology. Part 2: Evaluation of compound selectivity using 2D molecular fingerprints
    • DOI 10.1111/j.1747-0285.2007.00555.x
    • Vogt I., Stumpfe D., Ahmed H.E.A., Bajorath J. (2007) Methods for computer-aided chemical biology. Part 2: evaluation of compound selectivity using 2D molecular fingerprints. Chem Biol Drug Des 70 : 195 205. (Pubitemid 47305403)
    • (2007) Chemical Biology and Drug Design , vol.70 , Issue.3 , pp. 195-205
    • Vogt, I.1    Stumpfe, D.2    Ahmed, H.E.A.3    Bajorath, J.4
  • 8
    • 43949101012 scopus 로고    scopus 로고
    • Methods for computer-aided chemical biology. Part 3: Analysis of structure-selectivity relationships through single- or dual-step selectivity searching and Bayesian classification
    • Stumpfe D., Geppert H., Bajorath J. (2008) Methods for computer-aided chemical biology. Part 3: analysis of structure-selectivity relationships through single- or dual-step selectivity searching and Bayesian classification. Chem Biol Drug Des 71 : 518 528.
    • (2008) Chem Biol Drug des , vol.71 , pp. 518-528
    • Stumpfe, D.1    Geppert, H.2    Bajorath, J.3
  • 9
    • 65249163404 scopus 로고    scopus 로고
    • Searching for target-selective compounds using different combinations of multiclass support vector machine ranking methods, kernel functions, and fingerprint descriptors
    • Wassermann A.M., Geppert H., Bajorath J. (2009) Searching for target-selective compounds using different combinations of multiclass support vector machine ranking methods, kernel functions, and fingerprint descriptors. J Chem Inf Model 49 : 582 592.
    • (2009) J Chem Inf Model , vol.49 , pp. 582-592
    • Wassermann, A.M.1    Geppert, H.2    Bajorath, J.3
  • 10
    • 60349100337 scopus 로고    scopus 로고
    • Methods for computer-aided chemical biology. Part 4: Selectivity searching for ion channel ligands and mapping of molecular fragments as selectivity markers
    • Ahmed H.E.A., Geppert H., Stumpfe D., Lounkine E., Bajorath J. (2009) Methods for computer-aided chemical biology. Part 4: selectivity searching for ion channel ligands and mapping of molecular fragments as selectivity markers. Chem Biol Drug Des 73 : 273 282.
    • (2009) Chem Biol Drug des , vol.73 , pp. 273-282
    • Ahmed, H.E.A.1    Geppert, H.2    Stumpfe, D.3    Lounkine, E.4    Bajorath, J.5
  • 12
    • 0035986223 scopus 로고    scopus 로고
    • Thiol-dependent cathepsins: Pathophysiological implications and recent advances in inhibitor design
    • Brömme D., Kaleta J. (2002) Thiol-dependent cathepsins: pathophysiological implications and recent advances in inhibitor design. Curr Pharm Des 8 : 1639 1658.
    • (2002) Curr Pharm des , vol.8 , pp. 1639-1658
    • Brömme, D.1    Kaleta, J.2
  • 13
    • 37549068912 scopus 로고    scopus 로고
    • Cathepsin K inhibitors: A novel target for osteoporosis therapy
    • Stoch S.A., Wagner J.A. (2008) Cathepsin K inhibitors: a novel target for osteoporosis therapy. Clin Pharmacol Ther 83 : 172 176.
    • (2008) Clin Pharmacol Ther , vol.83 , pp. 172-176
    • Stoch, S.A.1    Wagner, J.A.2
  • 14
    • 26944503021 scopus 로고    scopus 로고
    • Using extended-connectivity fingerprints with Laplacian-modified Bayesian analysis in high-throughput screening follow-up
    • Rogers D., Brown R.D., Hahn M. (2005) Using extended-connectivity fingerprints with Laplacian-modified Bayesian analysis in high-throughput screening follow-up. J Biomol Screen 10 : 682 686.
    • (2005) J Biomol Screen , vol.10 , pp. 682-686
    • Rogers, D.1    Brown, R.D.2    Hahn, M.3
  • 15
    • 0023965741 scopus 로고
    • SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules
    • Weininger D. (1988) SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules. J Chem Inf Comput Sci 28 : 31 36.
    • (1988) J Chem Inf Comput Sci , vol.28 , pp. 31-36
    • Weininger, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.