Identification of genes differentially expressed in Mikania micrantha during Cuscuta campestris infection by suppression subtractive hybridization

Journal of Plant Physiology

Volumn 166, Issue 13, 2009, Pages 1423-1435

  Li, Dong Mei ^a   Staehelin, Christian ^a   Zhang, Yi Shun ^a   Peng, Shao Lin ^a  

^a SUN YAT SEN UNIVERSITY   (China)

Author keywords

Cuscuta campestris; Expressed sequence tag; Gene expression; Mikania micrantha; Suppression subtractive hybridization

Indexed keywords

ARTICLE; CUSCUTA; EXPRESSED SEQUENCE TAG; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METHODOLOGY; MIKANIA; NUCLEIC ACID HYBRIDIZATION; PARASITOLOGY; PHYSIOLOGY; PLANT; PLANT GENE; PLANT STEM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

CUSCUTA; EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MIKANIA; NUCLEIC ACID HYBRIDIZATION; PLANT SHOOTS; PLANT STEMS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

CUSCUTA; CUSCUTA CAMPESTRIS; MIKANIA; MIKANIA MICRANTHA;

EID: 67651250088     PISSN: 01761617     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jplph.2009.02.002     Document Type: Article

References (48)

1. Albert M., Werner M., Proksch P., Fry S.C., and Kaldenhoff R. The cell wall-modifying xyloglucan endotransglycosylase/hyderlase lexth1 is expressed during the defence reaction of tomato against the plant parasite Cuscuta reflexa. Plant Biol 6 (2004) 402-407
2. Albert M., Belastegui-Macadam X., and Kaldenhoff R. An attack of the plant parasite Cuscuta reflexa induces the expression of attAGP, an attachment protein of the host tomato. Plant J 48 (2006) 548-556
3. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25 (1997) 3389-3402
4. Borsics T., and Lados M. cDNA cloning of a mechanical/abiltic stress-inducible calmodulin-related gene from dodder-infected alfalfa. Plant Cell Environ 24 (2001) 649-656
5. Borsics T., and Lados M. Dodder infection induces the expression of a pathogenesis-related gene of the family PR-10 in alfalfa. J Exp Bot 53 (2002) 1831-1832
6. Casado-Díaz A., Encinas-Villarejo S., Santos B., Schilirò E., Yubero-Serrano E.M., Amil-Ruíz F., et al. Analysis of strawberry genes differentially expressed in response to Colletotrichum infection. Physiol Plantarum 128 (2006) 633-650
7. Chen J., and Wang Z.Y. Progress in the study of plant transcription factors. J Plant Physiol Mol Biol 28 (2002) 81-88
8. Collinge D.B., Kragh K.M., Mikkelsen J.D., Nielsen K.K., Rasmussen U., and Vad K. Plant chitinases. Plant J 3 (1993) 31-40
9. Dawson J.H., Musselman L.J., Wolswinkel P., and Dörr I. Biology and control of Cuscuta. Rev Weed Sci 6 (1994) 265-317
10. Diatchenko L., Lau Y.F.C., Campbell A.P., Chenchik A., Moqadam F., Huang B., et al. Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc Natl Acad Sci USA 93 (1996) 6025-6030
11. Die J.V., Dita M.A., Krajinski F., González-Verdejo C.I., Rubiales D., Moreno M.T., et al. Identification by suppression subtractive hybridization and expression analysis of Medicago truncatula putative defence genes in response to Orobanche crenata parasitization. Physiol Mol Plant Pathol 70 (2007) 49-59
12. Ding L.W., Sun Q.Y., Wang Z.Y., Sun Y.B., and Xu Z.F. Using silica particles to isolate total RNA from plant tissues recalcitrant to extraction in guanidine thiocyanate. Anal Biochem 374 (2008) 426-428
13. Gantulga D., Turan Y., Bevan D.R., and Esen A. The Arabidopsis At1g45130 and At3g52840 genes encode β-galactosidases with activity toward cell wall polysaccharides. Phytochemistry 69 (2008) 1661-1670
14. Gowda B.S., Riopel J.L., and Timko M.P. NRSA-1: a resistance gene homolog expressed in roots of non-host plants following parasitism by Striga asiatica (witchweed). Plant J 20 (1999) 217-230
15. Griffitts A.A., Cramer C.L., and Westwood J.H. Host gene expression in response to Egyptian broomrape (Orobanche aegyptiaca). Weed Sci 52 (2004) 697-703
16. Gu R.S., Fonseca S., Puskas L.G., Hackler L., Zvara A., Dudits D., et al. Transcript identification and profiling during salt stress and recovery of Populus euphratica. Tree Physiol 24 (2004) 265-276
17. Guo Y., and Gan S. AtNAP, a NAC family transcription factor, has an important role in leaf senescence. Plant J 46 (2006) 601-612
18. Hirschi K.D., Korenkov V.D., Wilganowski N.L., and Wagner G.J. Expression of Arabidopsis CAX2 in tobacco altered metal accumulation and increased manganese tolerance. Plant Physiol 124 (2000) 125-133
19. Holm L.G., Plucknett D.L., Pancho J.V., and Herberger J.P. The world's worst weeds: distribution and biology (1977), University Press of Hawaii, Honolulu p. 320-7
20. Joel D.M., and Portnoy V.V. The angiospermous root parasite Orobanche L. (Orobanchaceae) induces expression of a pathogenesis related (PR) gene in susceptible tobacco roots. Ann Bot 81 (1998) 779-781
21. Khan A.A., and Shih D.S. Molecular cloning, characterization, and expression analysis of two class II chitinase genes from the strawberry plant. Plant Sci 166 (2004) 753-762
22. Kumari M., Taylor G.J., and Deyholos M.K. Transcriptomic responses to aluminum stress in roots of Arabidopsis thaliana. Mol Genet Genomics 279 (2008) 339-357
23. Letousey P., de Zélicourt A., Vieira Dos Santos C., Thoiron S., Monteau F., Simier P., et al. Molecular analysis of resistance mechanisms to Orobanche cumana in sunflower. Plant Pathol 56 (2007) 536-546
24. Lian J.Y., Ye W.H., Cao H.L., Lai Z.M., Wang Z.M., and Cai C.X. Influence of obligate parasite Cuscuta campestris on the community of its host Mikania micrantha. Weed Res 46 (2006) 441-443
25. Lin R., Zhao W., Meng X., Wang M., and Peng Y. Rice gene OsNAC19 encodes a novel NAC-domain transcription factor and responds to infection by Magnaporthe grisea. Plant Sci 172 (2007) 120-130
26. Lowe S, Browne M, Boudjelas S, De Poorter M. 100 of the world's worst invasive alien species. In: A selection from the Global Invasive Species Database. Auckland, New Zealand: IUCN/SSC Invasive Species Specialist Group (ISSG), 2001.
27. Lu P.L., Chen N.Z., An R., Su Z., Qi B.S., Ren F., et al. A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis. Plant Mol Biol 63 (2007) 289-305
28. Nakashima K., Tran L.S.P., Nguyen D.V., Fujita M., Maruyama K., Todaka D., et al. Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice. Plant J 51 (2007) 617-630
29. Parker C. The Mikania problem. PANS 18 (1972) 312-315
30. Reddy S.M., Pandey A.K., Melayal D., Marmeisse R., and Gay G. The auxin responsive gene Pp-C61 is up-regulated in Pinus pinaster roots following inoculation with ectomycorrhizal fungi. Plant Cell Environ 26 (2003) 681-691
31. Romeis T., Ludwig A.A., Martin R., and Jones J.D.G. Calcium-dependent protein kinases play an essential role in a plant defence response. EMBO J 20 (2001) 5556-5567
32. Sahai A.S., and Manocha M.S. Chitinases of fungi and plants: their involvement in morphogenesis and host-parasite interaction. FEMS Microbiol Rev 11 (1993) 317-338
33. Sampedro J., and Cosgrove D.J. The expansin superfamily. Genome Biol 6 (2005) 242.1-11
34. Seo H.S., Song J.T., Cheong J.J., Lee Y.H., Lee Y.W., Hwang I., et al. Jasmonic acid carboxyl methyltransferase: a key enzyme for jasmonate-regulated plant responses. Proc Natl Acad Sci USA 98 (2001) 4788-4793
35. Shen H., Ye W.H., Hong L., Cao H.L., and Wang Z.M. Influence of the obligate parasite Cuscuta campestris on growth and biomass allocation of its host Mikania micrantha. J Exp Bot 56 (2005) 1277-1284
36. Shen H., Hong L., Ye W.H., Cao H.L., and Wang Z.M. The influence of the holoparasitic plant Cuscuta campestris on the growth and photosynthesis of its host Mikania micrantha. J Exp Bot 58 (2007) 2929-2937
37. Shin S.Y., Lee H.S., Kwon S.Y., Kwon S.T., and Kwak S.S. Molecular characterization of a cDNA encoding copper/zinc superoxide dismutase from cultured cells of Manihot esculenta. Plant Physiol Biochem 43 (2005) 55-60
38. Tabor C.W., and Tabor H. Methionine adenosyl transferase (S-adenosylmethionine synthetase) and S-adenosylmethionine decarboxylase. Adv Enzymol 56 (1984) 251-282
39. Tsai T.M., Chen Y.R., Kao T.W., Tsay W.S., Wu C.P., Huang D.D., et al. PaCDPK1, a gene encoding calcium-dependent protein kinase from orchid, Phalaenopsis amabilis, is induced by cold, wounding, and pathogen challenge. Plant Cell Rep 26 (2007) 1899-1908
40. Uauy C., Distelfeld A., Fahima T., Blechl A., and Dubcovsky J. A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 314 (2006) 1298-1301
41. Vieira Dos Santos V., Letousey P., Delavault P., and Thalouarn P. Defense gene expression analysis of Arabidopsis thaliana parasitized by Orobanche ramosa. Phytopathology 93 (2003) 451-457
42. Vieira Dos Santos V., Delavault P., Letousey P., and Thalouarn P. Identification by suppression subtractive hybridization and expression analysis of Arabidopsis thaliana putative defence genes during Orobanche ramosa infection. Physiol Mol Plant Pathol 62 (2003) 297-303
43. Werner M., Uehlein N., Proksch P., and Kaldenhoff R. Characterization of two tomato aquaporins and expression during the incompatible interaction of tomato with the plant parasite Cuscuta reflexa. Planta 213 (2001) 550-555
44. Westwood J.H., Yu X., Foy C.L., and Cramer C.L. Expression of a defense-related 3-hydroxy-3-methylglutaryl CoA reductase gene in response to parasitization by Orobanche spp. Mol Plant Microbe Interact 11 (1998) 530-536
45. Wirjahar S. Autecological study of Mikania spp. In: Proceedings of fifth Asian-Pacific Weed Science Society conference, 5-11, October 1975. Tokyo: Asian Weed Science Society, 1976, p. 70-3.
46. Wormit A., Trentmann O., Feifer I., Lohr C., Tjaden J., Meyer S., et al. Molecular identification and physiological characterization of a novel monosaccharide transporter from Arabidopsis involved in vacuolar sugar transport. Plant Cell 18 (2006) 3476-3490
47. Zhang L.Y., Ye W.H., Cao H.L., and Feng H.L. Mikania micrantha H. B. K. in China - an overview. Weed Res 44 (2004) 42-49
48. Zhong R., Richardson E.A., and Ye Z.H. Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation for secondary wall synthesis in fibers of Arabidopsis. Planta 225 (2007) 1603-1611