The effect of the crosstalk between photoperiod and temperature on the heading-date in rice

PLoS ONE

Volumn 4, Issue 6, 2009, Pages

  Luan, Weijiang ^a,b,d   Chen, Huizhe ^b   Fu, Yaping ^b   Si, Huamin ^b   Peng, Wen ^a   Song, Susheng ^a   Liu, Wenzhen ^b   Hu, Guocheng ^b   Sun, Zongxiu ^b   Xie, Daoxin ^a   Sun, Chuanqing ^c  

^a TSINGHUA UNIVERSITY   (China)

^b CHINA NATIONAL RICE RESEARCH INSTITUTE   (China)

^c CHINA AGRICULTURAL UNIVERSITY   (China)

^d TIANJIN NORMAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR HD1; UNCLASSIFIED DRUG; MESSENGER RNA;

ARTICLE; CONTROLLED STUDY; GENE DELETION; GENE DUPLICATION; GENE EXPRESSION; GENE FREQUENCY; GENE INSERTION; GENE LOCUS; GENETIC VARIABILITY; GROWTH INHIBITION; LEAF GROWTH; LINKAGE ANALYSIS; LOW TEMPERATURE; MOLECULAR INTERACTION; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; PHENOTYPE; PHOTOPERIODICITY; PHYTOTRON; PLANT GROWTH; RICE; SEQUENCE ANALYSIS; ALLELE; DNA SEQUENCE; GENE EXPRESSION REGULATION; GENETICS; LIGHT; METABOLISM; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; PLANT GENE; PLANT PHYSIOLOGY; SEQUENCE HOMOLOGY; TEMPERATURE; TIME;

ALLELES; BASE SEQUENCE; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; LIGHT; MOLECULAR SEQUENCE DATA; MUTATION; ORYZA SATIVA; PHOTOPERIOD; PLANT PHYSIOLOGICAL PHENOMENA; RNA, MESSENGER; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TEMPERATURE; TIME FACTORS;

EID: 67651244260     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0005891     Document Type: Article

References (37)

1. Garner WW, Allard HA (1920) Effect of the relative length of day and night and other factors of the environment on growth and reproduction in plants. J Agric Res 18: 553-606.
2. Garner WW, Allard HA (1923) Further studies in photoperiodism, the response of the plant to relative length of day and night. J Agric Res 23: 871-920.
3. Izawa T (2007) Daylength measurements by rice plants in photoperiodic shortday flowering. International Review of Cytology 256: 191-222.
4. Simpson GG, Dean C (2002) Arabidopsis, the rosetta stone of flowering time? Science 296: 285-289.
5. Lin HX, Liang ZW, Sasaki T, Yano M (2003) Fine mapping and characterization of quantitative trait loci Hd4 and Hd5 controlling heading date in rice. Breed Sci 53: 51-59.
6. Lin HX, Yamamoto T, Sasaki T, Yano M (2002) Identification and characterization of a quantitative trait locus, Hd9, controlling heading date in rice. Breed Sci 52: 35-41.
7. Lin HX, Yamamoto T, Sasaki T, Yano M (1998) Characterization and detection of epistatic interactions of three QTLs, Hd1, Hd2 and Hd3, controlling heading date in rice using nearly isogenic lines. Theor Appl Genet 101: 1021-1028.
8. Yamamoto T, Kuboki Y, Lin SY, Sasaki T, Yano M (1998) Fine mapping of quantitative trait loci Hd1, Hd2, and Hd3, controlling heading date of rice, as single Mendelian factors. Theor Appl Genet 97: 37-44.
9. Yamamoto T, Lin HX, Sasaki T, Yano M (2000) Identification of heading date quantitative trait locus Hd6 and characterization of its epistatic interactions with Hd2 in rice using advanced backcross progeny. Genetics 154: 885-891.
10. Yano M, Harushima Y, Nagamura Y, Kurata N, Minobe Y, Sasaki T (1997) Identification of quantitative trait loci controlling heading date in rice using a high-density linkage map. Theor Appl Genet 95: 1025-1032.
11. Izawa T, Oikawa T, Tokutomi S, Okuno K, Shimamoto K (2000) Phytochromes confer the photoperiodic control of flowering in rice (a shortday plant). Plant J 22: 391-399.
12. Yano M, Katayose Y, Ashikari M, Yamanouchi U, Monna L, et al. (2000) Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12: 2473-2484.
13. Izawa T, Oikawa T, Sugiyama N, Tanisaka T, Yano M, Shimamoto K (2002) Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice. Genes & Dev 16: 2006-2020.
14. Doi K, Izawa T, Fuse T, Yamanouchi U, Kubo T, et al. (2004) Ehd1, a B-type response regulator in rice, confers short-daypromotion of flowering and controls FT-like gene expression independently of Hd1. Genes & Dev 18: 926-936.
15. Kojima S, Takahashi Y, Kobayashi Y, Monna L, Sasaki T, et al. (2002) Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions. Plant Cell Physiol 43: 1096-1105.
16. Tamaki S, Matsuo S, Wong HL, Yokoi S, Shimamoto K (2007) Hd3a protein is a mobile flowering signal in rice. Science express DOI: 10.1126/science. 1141753.
17. Hamner KC, Bonner J (1938) Photoperiodism in relation to hormones as factors in floral initiation and development. Bot Gaz 100: 388-431.
18. Ishikawa R, Tamaki S, Yokoi S, Inagaki N, Shinomura T, et al. (2005) Suppression of the floral activator Hd3a is the principal cause of the night break effect in rice. Plant Cell 17: 3326-3336.
19. Takahashi Y, Shomura A, Sasaki T, Yano M (2001) Hd6, a rice quantitative trait locus involved in photoperiod sensitivity, encodes the a subunit of protein kinase CK2α. Proc Natl Acad Sci U S A 98: 7922-7927.
20. Hayama R, Yokoi S, Tamaki S, Yano M, Shimamoto K (2003) Adaptation of photoperiodic control pathways producesshort-day flowering in rice. Nature 422: 719-722.
21. Kim SL, Lee S, Kim HJ, Nam HG, An G (2007) OsMADS51 is a short-day flowering promoter that functions upstream of Ehd1, OsMADS14, and Hd3a. Plant Physiology 145: 1484-1494.
22. Amasino RM (2005) Vernalization and flowering time. Curr Opin Biotech 16: 154-158.
23. Michaels SD, Amasino RM (1999) FLOWERING LOCUS C encodes a novel MADS domains protein that acts as a repressor of flowering. Plant Cell 11: 949-956.
24. Searle I, He YH, Turck F, Vincent C, Fornara F, et al. (2006) The transcription factor FLC confers a flowering response to verbalization by repressing meristem competence and systemic signaling in Arabidopsis. Genes & Dev 20: 898-912.
25. Sung S, Amasino RM (2004a) Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3. Nature 427: 159-164.
26. Sung S, Amasino RM (2004b) Vernalization and epigenetics: How plants remember winter. Curr Opin Plant Biol 7: 4-10.
27. Blázquez MA, Ahn JH, Weigel D (2003) A thermosensory pathway controlling flowering time in Arabidopsis thaliana. Nature genetics 33: 168-171.
28. Halliday KJ, Salter MG, Thingnaes E, Whitelam GC (2003) Phytochrome control of flowering is temperature sensitive and correlates with expression of the floral integrator FT. Plant J 33: 875-885.
29. Suárez-López P, Wheatley K, Robson F, Onouchi H, Valverde F, Coupland G (2001) CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. Nature 410: 1116-1120.
30. Putterill J, Robson F, Lee K, Simon R, Coupland G (1995) The CONSTANS gene of Arabidopsis promotes flowering and encodes a protein showing similarities to zinc finger transcription factors. Cell 80: 847-857.
31. Takahashi Y, Teshima KM, Yokoi S, Innan H, Shimamoto K (2009) Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice. Proc Natl Acad Sci U S A doi:10.1073/pnas.0812092106.
32. Jang S, Marchal V, Panigrahi KC, Wenkel S, Soppe W, et al. (2008) Arabidopsis COP1 shapes the temporal pattern of CO accumulation conferring a photoperiodic flowering response. EMBO J 27: 1277-1288.
33. Liu LJ, Zhang YC, Li QH, Sang Y, Mao J, et al. (2008) COP1-mediated ubiquitination of CONSTANS is implicated in cryptochrome regulation of flowering in Arabidopsis. Plant Cell 20: 292-306.
34. Valverde F, Mouradov A, Soppe W, Ravenscroft D, Samach A, Coupland G (2004) Photoreceptor regulation of CONSTANS protein in photoperiodic flowering. Science 303: 1003-1006.
35. Laubinger S, Marchal V, Le Gourrierec J, Wenkel S, Adrian J, et al. (2006) Arabidopsis SPA proteins regulate photoperiodic flowering and interact with the floral inducer CONSTANS to regulate its stability. Development 133: 3213-3222.
36. Nakagawa H, Yamagishi J, Miyamoto N, Motoyama M, Yano M, Nemoto K (2005) Flowering response of rice to photoperiod and temperature: a QTL analysis using a phonological model. Theor Appl Genet 110: 778-786.
37. -ΔΔCt Method. Methods 25: 402-408.