Investigating early vigour in upland rice (Oryza sativa L.): Part II. Identification of QTLs controlling early vigour under greenhouse and field conditions

Field Crops Research

Volumn 113, Issue 3, 2009, Pages 207-217

  Cairns, J E ^a   Namuco, O S ^a   R Torres, ^a   Simborio, F A ^a   Courtois, B ^b   Aquino, G A ^c   Johnson, D E ^a  

^a INTERNATIONAL RICE RESEARCH INSTITUTE   (Philippines)

^b CIRAD   (France)

^c INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

Author keywords

Early vigour; Environmental interaction; Quantitative trait loci (QTL); Rice (Oryza sativa L.)

Indexed keywords

BIOMASS; CROP IMPROVEMENT; GENE EXPRESSION; GERMPLASM; GREENHOUSE ECOSYSTEM; GROWTH RATE; HERITABILITY; LEAF AREA; PHENOTYPE; PLEIOTROPY; RICE; SHOOT; VIGOR;

JAPONICA; ORYZA SATIVA;

EID: 67651008259     PISSN: 03784290     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fcr.2009.05.007     Document Type: Article

References (30)

1. Balasubramanian V., and Hill J.E. Direct seeding of rice in Asia: emerging issues and strategic research needs for the 21st century. In: Pandey S., Mortimer M., Wade L., Tuong T.P., Lopez K., and Hardy B. (Eds). Direct Seeding: Research Strategies and Opportunities (2002), International Rice Research Institute, Philippines 15-42
2. Cui K., Huang J., Xing Y., Yu S., Xu C., and Peng S. Mapping QTLs for seedling characteristics under different water supply conditions in rice (Oryza sativa). Plant Physiol. 132 (2008) 53-68
3. Cui K.H., Peng S.B., Xing Y.Z., Yu S.B., Xu C.G., and Zhang Q. Molecular dissection of seedling vigour and associated physiological traits in rice. Theor. Appl. Genet. 105 (2002) 745-753
4. Hunt R. Plant Growth Curves (1982), E. Arnold Publishers, London
5. Kanbar A., Janamatti M., Sudheer E., Vinod M.S., and Shashidhar H.E. Mapping QTLs underlying seedling vigour traits in rice (Oryza sativa L.). Curr. Sci. India 90 (2006) 24-26
6. Li C.C., and Rutger J.N. Inheritance of cool temperature seedling vigour in rice and its relationship with other agronomic characteristics. Crop Sci. 20 (1980) 295-298
7. Lu X.L., Niu A.L., Cai H.Y., Zhao Y., Liu J.W., Zhu Y.G., and Zhang Z.H. Genetic dissection of seedling and early vigour in a recombinant inbred line population of rice. Plant Sci. 172 (2007) 212-220
8. Mgonja M.A., Ladeinde T.A.O., and Akenova M.E. Genetic analysis of mesocotyl length and its relationship with other agronomic characters in rice (Oryza sativa L.). Euphytica 72 (1993) 189-195
9. Namuco O.S., Cairns J.E., and Johnson D.E. Investigating early vigour in upland rice (Oryza sativa L.). Part I. Seedling growth and grain yield in competition with weeds. Field Crops Res. 113 (2009) 197-206
10. Price A.H., Cairns J.E., Horton P., Jones H.G., and Griffiths H. Linking drought-resistance mechanisms in upland rice using a QTL approach: progress and new opportunities to integrate stomatal and mesophyll responses. J. Exp. Bot. 53 (2002) 989-1004
11. Quarrie S.A., Strojanovic J., and Pekic S. Improving drought resistance in small-grained cereals: a case study, progress and prospects. Plant Growth Regul. 29 (1999) 1-21
12. Rebetzke G.J., Ellis M.H., Bonnett D.G., and Richards R.A. Molecular mapping of genes for coleoptile growth in bread wheat (Triticum aestivum L.). Theor. Appl. Genet. 114 (2007) 1173-1183
13. Rebetzke G.J., and Richards R.A. Genetic improvement of early vigour in wheat. Aust. J. Agric. Res. 50 (1999) 291-301
14. Redoña E.D., and Mackill D.J. Genetic variation for seedling-vigour traits in rice. Crop Sci. 36 (1996) 285-290
15. Redoña E.D., and Mackill D.J. Mapping quantitative trait loci for seedling vigour in rice using RFLPs. Theor. Appl. Genet. 92 (1996) 395-402
16. Richards R.A. The effect of semi-dwarfing genes in spring wheat in dry environments. II. Growth, water use and water-use efficiency. Aust. J. Agric. Res. 43 (1992) 529-539
17. Richards R. Defining selection criteria to improve yield under drought. Plant Growth Regul. 20 (1996) 157-166
18. Richards R.A., and Lukacs Z. Seedling vigour in wheat-sources of variation for genetic and agronomic improvement. Aust. J. Agric. Res. 53 (2002) 41-50
19. Richards R.A., Rebetzke G.J., Condon A.G., and van Herwaarden A.F. Breeding opportunities for increasing the efficiency of water use and crop yield in temperate cereals. Crop Sci. 42 (2002) 111-121
20. SAS. Statistical Analysis Systems (1996), SAS Institute Inc., Cary, NC, USA
21. Sasaki A., Ashikari M., Ueguchi-Tanaka M., Itoh H., Nishimura A., Swapan D., Ishiyama K., Saito T., Kobayashi M., Khush G.S., and Matsuoka M. Green revolution: a mutant gibberellin-synthesis gene in rice-new insight into the rice variant that helped to avert famine over thirty years ago. Nature 416 (2002) 701-702
22. Sie M., Dingkuhn M., Wopereis M.C.S., and Miezan K.M. Rice crop duration and leaf appearance rate in a variable thermal environment. II. Comparison of genotypes. Field Crops Res. 58 (1998) 129-140
23. Wu J.L., Sinha P.K., Variar M., Zheng L.K., Leach J.E., Courtois B., and Leung H. Association between molecular markers and blast resistance in an advanced backcross population of rice. Theor. Appl. Genet. 108 (2004) 1024-1032
24. Wu W.R., Li W.M., Tang D.Z., Lu H.R., and Worland A.J. Time-related mapping of quantitative trait loci underlying tiller number in rice. Genetics 151 (1999) 297-303
25. Xu C.G., Li X.Q., Xue Y., Huang Y.W., Gao J., and Xing Y.Z. Comparison of quantitative trait loci controlling seedling vigour characteristics at two seedling stages in rice recombinant inbred lines. Theor. Appl. Genet. 109 (2004) 640-647
26. Yan J., Zhu J., He C., Benmoussa M., and Wu P. Molecular dissection of developmental behaviour of plant height in rice (Oryza sativa L.). Genetics 150 (1998) 1257-1265
27. Zhang Z.H., Qu X.S., Wan S., Chen L.H., and Zhu Y.G. Comparison of QTL controlling seedling vigour under different temperature conditions using recombinant inbred lines in rice (Oryza sativa). Ann. Bot. Lond. 95 (2005) 423-429
28. Zhang Z.H., Yu S.B., Yu T., Huang Z., and Zhu Y.G. Mapping quantitative trait loci (QTLs) for seedling-vigour using recombinant inbred lines of rice (Oryza sativa L.). Field Crops Res. 91 (2005) 161-170
29. Zhao D., Atlin G.N., Bastiaans L., and Spiertz J.L. Developing selection protocols for weed competitiveness in aerobic rice. Field Crops Res. 97 (2006) 272-285
30. Zhou L., Wang J.K., Yi Q., Wang Y.Z., Zhu Y.G., and Zhang Z.H. Quantitative trait loci for seedling vigour in rice under field conditions. Field Crops Res. 100 (2007) 294-301