Biogeography and phylogeny of Cardamine (Brassicaceae)

Annals of the Missouri Botanical Garden

Volumn 96, Issue 2, 2009, Pages 215-236

  Carlsen, Tor ^a   Bleeker, Walter ^b   Hurka, Herbert ^b   Elven, Reidar ^a   Brochmann, Christian ^a  

^a UNIVERSITY OF OSLO   (Norway)

^b UNIVERSITY OF OSNABRÜCK   (Germany)

Author keywords

Arctic; Biogeography; Brassicaceae; Cardamine; Phylogeny; Polyploidization

Indexed keywords

BRASSICACEAE; CARDAMINE;

EID: 67650927935     PISSN: 00266493     EISSN: None     Source Type: Journal    
DOI: 10.3417/2007047     Document Type: Article

References (71)

1. Al-Shehhaz, I. A. 1988. The genera of Arabideae (Cruciferae, Brassieaceae) in the southeastern United States. J. Arnold Arh. 69: 85-166.
2. -, M. A. Beilstein & E. A. Kellogg. 2006. Systematics and phylogeny of the Brassicaceae (Cruciferae): An overview. Pl. Syst. Evol. 259: 89-120.
3. Beilstein, M. A., I. A. Al-Sbehhaz & E. A. Kellogg. 2006. Brassieaceae phylogeny and trichome evolution. Amer. J. Hot. 93: 607-619.
4. Bennike. (.). & J. Böcher. 1990. Forest-lundra neighhonring the North Pole-Planl and inseci remains from the Pho-Pleistocene Kap Køhenhavn formation, North Greenland. Arctic 43: 331-338.
5. Bleeker, W. & H. Hurka. 2001. Introgressive hybridization in Rorippa (Brassicaceae): Gene flow and its consequences in natural and anthropogenic habitats. Molec. Eeol. 10: 2013-2022.
6. -, A. Franzke, K. Polhnann, A. H. D. Brown & H. Hurka. 2002. Phylogeny and biogeography of Southern Hemisphere high-monnlain Cardamine species (Brassieaceae). Auslral. Syst. Mot. 15: 575-581.
7. Bremer. K. 1994. Branch support and tree stability. Claclislics 10: 295-301
8. Cook. L. G. & M. D. Crisp. 2005. Directional asymmetry of long-distance dispersal and colonization could mislead reconstructions of biogeography. J. Biogeogr. 32: 741-754.
9. Donoghuc, M. J. & S. A. Smith. 2004. Patterns in the assembly of temperate forests around the Northern Hemisphere. Philos. Trans., Ser. B 359: 1633-1644
10. Elven, R., D. F. Murray, V. Y. Razzhivin & B. A. Yurlsev. 2006. Panarctic Flora Checklist. Vascular Plants Draft version (2006). National Centre for Biosysteinatics, University of Oslo, Oslo. , accessed 16 April 2009.
11. Karris, J. S. 1989. The retention index and the resealed consistency index. Cladistics 5: 417-119.
12. -, V. A. Albert, M. Källersjö, D. Lipscomb & A. G. Kluge. 1996. Parsimony jackknifing out performs neighborjoining. Gladistics 12: 99-124.
13. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 4: 783-791.
14. Fishbein, M. C. Hibsch-Jelter, D. Soltis & L.. Hufford. 2001. Phylogeny of Saxifragales (angiosperms, eudicots): Analysis of a rapid, ancient radiation. Syst. Biol. 50: 817-847.
15. Franzke, A. & K. Muinnienhoff. 1999. Recent hybrid speciation in Cardamine (Brassicaceae)-Conversion of nuclear ribosoimal ITS sequences in statu nascendi. Theor. Appl. Genet. 98: 831-834.
16. - & H. Hurka. 2000. Molecular systematics and biogeography of the Cardamine pralensis complex (Brassicaceae). Pl. Sysl. Evol. 224: 213-234
17. -, K. Pollmann, W. Bleeker, R. Kohrt & H. Hurka. 1998. Molecular systematics of Cardamine and allied genera (Brassicaecae): ITS and non-coding chloroplast DNA. Folia Geobot. 33: 225-240.
18. Givnish, T. J. & S. S. Rentier. 2004. Tropical intercontinental disjunctions: Gondwana breakup, immigration from the boreotropics, and transoceanic dispersal. Int. J. PI. Sci. 165: S1-S6.
19. Gladenkov, A. Y., A. E. Oleinik, J. L. Marincovich & K. B. Barinov. 2002. A refined age for the earliest opening of Bering Slrait. Palaeogeogr. Palaeoclimatol. Palaeoecol. 183: 321-328.
20. Goloboff, P. A. 1993. Estimating character weights during tree search. Cladistics 9: 83-91.
21. -, J. Farris & K. Nixon. 2003. TNT (Tree analysis using New Technology). Published by the authors, Tueumán, Argentina.
22. Graham, A. 1999. Late Cretaceous and Cenozoic History of North American Vegetation North of Mexico. Oxford University Press, New York.
23. -, 2006. Modern processes and historical factors in the origin of the African element in Latin America. Ann. Missouri Bot. Card. 93: 33.5-339.
24. Hall, T. A. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nuel. Acids Symp. Ser. 41: 95-98.
25. Harnman, N. A. 1965. The Genus Dentaria (Cruciferae) in Eastern North America. Ph. D. Dissertation, Vanderbill Universily. Nasbville.
26. Haubodl, B. & T. Wiehe. 2001. Statistics of divergence limes. Molec. Biol. Evol. 18: 1157-1160.
27. Heads, M. 2005. Dating nodes on molecular phylogenies: A critique of molecular biogeography. Cladistics 21: 62-78.
28. Hewson, H. J. 1982. Flora of Australia. Australian Government Publishing Service, Canberra.
29. Hofacker, I. L., W. Fontana, P. F. Sladler, S. Bonhoeffer, M. Packer & P. Schuster. 1994. Fast folding and comparison of RNA secondary structures. Monalsb. Chem. 125: 167-188.
30. Huelsenbeck. J. P. & F. Ronquisl. 2001. MRBAYES: Bavesian inlerence of phylogenetie trees. Bioinformatics 17: 754-755.
31. Kimata, M. 1983. Comparative studies on the reproductive systems of Cardamine flexuosa, Cardamine impatiens, Cardarnine seutata, and Cardamine lyrata, Cruciferae. Bot. Mag. (Tokyo) 96: 299-312.
32. Kluge, A. G. & J. S. Farris. 1969. Quantitative phyletics and evolution of Anurans. Syst. Zool. 18: 1-32.
33. Koch, M. & I. A. Al-Shehbaz. 2002. Molecular data indicate complex intra- and intercontinental differentiation of American Draba (Brassicaceae). Ann. Missouri Bot. Gard. 89: 88-109.
34. -, B. Haubold & T. Mitchell-Olds. 2000. Comparative evolutionary analysis of chalcone syntliase and alcohol dehydrogenase loci in Arabidopsis, Arabia, and related genera (Brassicaceae). Molec. Biol. Evol. 17: 1483-1498.
35. -, -& -, 2001. Molecular systematics of the Brassicaceae: Evidence from coding plastidic mat K. and nuclear Chs sequences. Amer. J. Bot. 88: 534-544.
36. -, C. Dobes, M. Matschinger, W. Bleeker, J. Vogel, M. Kiefer & T. Mitchell-Olds. 2005. Evolution of the trn F (GAA) gene in Arabidopsis relatives and the Brassicaceae family: Monophyletic origin and subsequent diversification of a plastidic pseudogene. Molec. Biol. Evol. 22: 1032-1043.
37. Kucera, J., I. Valko & K. Marhold. 2005. On-line database of the chromosome numbers of the genus Cardamine (Brassicaceae). Biologia 60: 473-476.
38. Lafontaine, J. I. & D. M. Wood. 1988. A zoogeographic analysis of the Noctuidae (Lepidoptera) of Beringia, and some inferences about past Beringian habitats. Mem. Entomol. Son. Canad. 144: 109-123.
39. Lear, C. H., H. Elderfield & P. A. Wilson. 2000. Cenozoic deep-sea temperatures and global ice volumes from Mg/Ca in benthic foraruiniferal calcite. Science 287: 269-272.
40. Lihova, J. & K. Marhold. 2003. Taxonomy and distribution of the Cardamine pralensis group (Brassicaceae) in Slovenia. Phyton (Horn) 43: 241-261.
41. -, J. Fuertes Aguilar, K. Marhold & G. Nieto Feliner. 2004. Origin of the disjunct tetraploid Cardamine arnporilana (Brassicaceae) assessed with nuclear and chloroplast DNA sequence data. Amer. J. Bot. 91: 1231-1242.
42. Mai, D. H. 1995. Tertiäre Vegetationsgeschichlc Europas. Gustav Fischer Verlag, Jena.
43. Marhold, K. & M. E. Ancev. 1999. Cardamine penzesii, a rediscovered taxon of the C. pratensis group (Crucilerae). Ann. Bot. Fenn. 36: 171-180.
44. - & J. Lihova. 2006. Polvploidy, hybridization and reticulate evolution: Lessons from the Brassicaceae. Pl. Syst. Evol. V259: 143-174.
45. -, M. Perny, R. Crupe & B. Neuffer. 2002. Natural hybridization in Cardamine (Brassieaeeae) in the Pyrenees: Evidence from morphological and molecular data. Bot. J. Linn. Soc. 139: 275-294.
46. -, & W. Bleeker. 2004. Comparative ITS and AFLP analysis of diploid Cardamine (Brassicaceae) taxa from closely related polyploid complexes. Ann. Bot. (Oxford) 93: 507-520.
47. Marineovich, L. 2001. New evidence for the age of Bering Strait. Quatern. Sci. Rev. 20: 329-335.
48. - & A. Y. Gladenkov. 1999. Evidence for an early opening of the Bering Strait. Nature 397: 149-151.
49. Matthews, J. V. & L. E. Ovenden. 1990. Late Tertiary plant macrofossils from localities in Arctic sub-arctic North America-A review of the data. Arctic 43: 364-392.
50. McGlone, M. S. 2005. Goodbye Gondwana. J. Biogeogr. 32: 739-740.
51. Mitchell, A. D. & P. B. Heenan. 2000. Systematic relationships of New Zealand endemic Brassicaceae inferred from nrDNA ITS sequence data. Sysl. Bot. 25: 98-105.
52. Murnmenboff, K., H. Bruggemann & J. L. Bowman. 2001. Chloroplast DNA phylogeny and biogeography of Lepidium (Brassicaceae). Amer. J. Bot. 88: 2051-2063.
53. Murray, D. F. 1995. Causes of Arctic plant diversity: Origin and evolution. Ecol. Stud. 113: 21-32.
54. Nylander, J. A. A. 2004. MrAIC.pl. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala.
55. Queiroz, A. de. 2005. The resurrection of oceanic dispersal in historical biogeography. Trends Ecol. Evol. 20: 68-73.
56. Rashid, A. & H. Ohba. 1993. A revision of Cardamine loxosiemonoides O. E. Schulz (Cruciferae). J. Japan. Bot. 68: 199-208.
57. Ronquist, F. 1997. Dispersal-vicariance analysis: A new approach to the quantification of historical biogeography. Syst. Biol. 46: 195-203.
58. - & J. P. Huelsenbeck. 2003. MrBayes 3: Bayesian phylogenetie inference under mixed models. Bioinforniatics 19: 1572-1574.
59. Schulz, O. E. 1903. Monographic der Gattung Cardamine. Bot. Jahrb. Syst. 32: 280-623.
60. -, 1936. Cruciferae. Pp. 227-658 in A. Engler & H. Harms (editors), Die natürlichen Pflanzenfamilien. Engelmann, Leipzig.
61. Siebert, S. & R. Backofen. 2005. MARNA: Multiple alignment and consensus structure prediction of RNAs based on sequence structure comparisons. Bioinformatics 21: 3352-3359.
62. Simmons, M. P. & H. Ochoterena. 2000. Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 49: 369-381.
63. Sjöstedlt, B. 1975. Revision of genus Cardamine L., (Crueiferae) in South America and Central America. Bot. Not. 128: 8-19.
64. Sweeney, P. W. & R. A. Price. 2000. Polyphyly of the genus Denlaria (Mrassicaceae): Evidence from Irn L intron and ndh F sequence data. Sysl. Bot. 25: 468-478.
65. Taberlet, P.. L. Gielly, C. Paulou & J. Bouvel. 1991. Universal primers lor amplification of three noncoding regions of chloroplasl DNA. Pl. Molec. Biol. 17: 1105-1109.
66. Thome, R. 2004. Tropical plant disjunctions: A personal reflection. Int. J. Pl. Sci. 165: SI37-SI38.
67. Warwick, S. L. & L. A. Al-Shehhaz. 2006. Brassicaceae: Chromosome number index and database on CD-Rom. PI. Sysl. Evol. 259: 237-248.
68. Webb, C. J., W. R. Sykes & P. J. Garnock-Jones. 1988. Flora of New Zealand. Botany Division. Department of Scientific and Industrial Research, Christchurch.
69. White, T., T. Brims, S. Leo & J. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315-322 in M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White (editors), PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego.
70. Yang, Y. W., K. N. Lai. P. Y. Tai, D. P. Ma & W. H. Li. 1999. Molecular phylogcnclic studies of Brassica, Rorippa, Arabidopsis, and allied genera based on the internal transcribed spacer region of 18S-25S rDNA. Molec. Phylogenet. Evol. 13: 455-462.
71. Zachos, J., M. Pagaui, L. Sloan, E. Thomas & K. Billups. 2001. Trends, rhythms, and aberrations in global climate 65 Ma to present. Science 292: 686-693.