-
1
-
-
0025183708
-
Basic local alignment search tool
-
DOI 10.1006/jmbi.1990.9999
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J.: Basic local alignment search tool. J. Molecular Biology 215(3), 403-410 (1990) (Pubitemid 20364473)
-
(1990)
Journal of Molecular Biology
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
38649143159
-
Using growing self-organising maps to improve the binning process in environmental whole-genome shotgun sequencing
-
DOI 10.1155/2008/513701, PII S1110724308513701
-
Chan, C.K., Hsu, A.L., Tang, S., Halgamuge, S.K.: Using growing self-organising maps to improve the binning process in environmental whole-genome shotgun sequencing. Journal of Biomedicine and Biotechnology (2008) (Pubitemid 351171854)
-
(2008)
Journal of Biomedicine and Biotechnology
, vol.2008
, Issue.1
, pp. 513701
-
-
Chan, C.-K.K.1
Hsu, A.L.2
Tang, S.-L.3
Halgamuge, S.K.4
-
3
-
-
49549125680
-
Annotation of metagenome short reads using proxygenes
-
Dalevi, D., Ivanova, N.N., Mavromatis, K., Hooper, S.D., Szeto, E., Hugenholtz, P., Kyrpides, N.C., Markowitz, V.M.: Annotation of metagenome short reads using proxygenes. Bioinformatics 24(16) (2008)
-
(2008)
Bioinformatics
, vol.24
, pp. 16
-
-
Dalevi, D.1
Ivanova, N.N.2
Mavromatis, K.3
Hooper, S.D.4
Szeto, E.5
Hugenholtz, P.6
Kyrpides, N.C.7
Markowitz, V.M.8
-
4
-
-
34249794257
-
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods
-
DOI 10.1038/nmeth1043, PII NMETH1043
-
Mavromatis, K., et al.: Use of simulated data sets to evaluate the fidelity of metagenomic processing methods. Nature Methods 4(6), 495-500 (2007) (Pubitemid 46852075)
-
(2007)
Nature Methods
, vol.4
, Issue.6
, pp. 495-500
-
-
Mavromatis, K.1
Ivanova, N.2
Barry, K.3
Shapiro, H.4
Goltsman, E.5
McHardy, A.C.6
Rigoutsos, I.7
Salamov, A.8
Korzeniewski, F.9
Land, M.10
Lapidus, A.11
Grigoriev, I.12
Richardson, P.13
Hugenholtz, P.14
Kyrpides, N.C.15
-
5
-
-
33947238287
-
The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through eastern tropical Pacific
-
DOI 10.1371/journal.pbio.0050077
-
Yooseph, S., et al.: The sorcerer ii global ocean sampling expedition: Expanding the universe of protein families. PLoS Biol. 5(3), 432-466 (2007) (Pubitemid 46422965)
-
(2007)
PLoS Biology
, vol.5
, Issue.3
, pp. 0398-0431
-
-
Rusch, D.B.1
Halpern, A.L.2
Sutton, G.3
Heidelberg, K.B.4
Williamson, S.5
Yooseph, S.6
Wu, D.7
Eisen, J.A.8
Hoffman, J.M.9
Remington, K.10
Beeson, K.11
Tran, B.12
Smith, H.13
Baden-Tillson, H.14
Stewart, C.15
Thorpe, J.16
Freeman, J.17
Andrews-Pfannkoch, C.18
Venter, J.E.19
Li, K.20
Kravitz, S.21
Heidelberg, J.F.22
Utterback, T.23
Rogers, Y.-H.24
Falcon, L.I.25
Souza, V.26
Bonilla-Rosso, G.27
Eguiarte, L.E.28
Karl, D.M.29
Sathyendranath, S.30
Platt, T.31
Bermingham, E.32
Gallardo, V.33
Tamayo-Castillo, G.34
Ferrari, M.R.35
Strausberg, R.L.36
Nealson, K.37
Friedman, R.38
Frazier, M.39
Venter, J.C.40
more..
-
6
-
-
43149085041
-
De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
-
DOI 10.1101/gr.072033.107
-
Hernandez, D., Francois, P., Farinelli, L., Osteras, M., Schrenzel, J.: De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer. Genome Research 18(5), 802-809 (2008) (Pubitemid 351645070)
-
(2008)
Genome Research
, vol.18
, Issue.5
, pp. 802-809
-
-
Hernandez, D.1
Francois, P.2
Farinelli, L.3
Osteras, M.4
Schrenzel, J.5
-
7
-
-
10044259013
-
-
O'Reilly & Associates Inc. Sebastopol
-
Korf, I., Yandell, M., Bedell, J.: BLAST. O'Reilly & Associates, Inc., Sebastopol (2003)
-
(2003)
BLAST
-
-
Korf, I.1
Yandell, M.2
Bedell, J.3
-
8
-
-
54449096251
-
Probing metagenomics by rapid cluster analysis of very large datasets
-
Li, W., Wooley, J.C., Godzik, A.: Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE 3(10) (2008)
-
(2008)
PLoS ONE
, vol.3
, pp. 10
-
-
Li, W.1
Wooley, J.C.2
Godzik, A.3
-
10
-
-
84958631348
-
An evolutionary algorithm for large scale set covering problems with application to airline crew scheduling
-
LNCS
-
Marchiori, E., Steenbeek, A.: An evolutionary algorithm for large scale set covering problems with application to airline crew scheduling. In: Real World Applications of Evolutionary Computing. LNCS, vol.1083, pp. 367-381 (2000)
-
(2000)
Real World Applications of Evolutionary Computing
, vol.1083
, pp. 367-381
-
-
Marchiori, E.1
Steenbeek, A.2
-
11
-
-
35748959318
-
What's in the mix: phylogenetic classification of metagenome sequence samples
-
DOI 10.1016/j.mib.2007.08.004, PII S136952740700118X, Antimicrobials/Genomics
-
McHardy, A.C., Rigoutsos, I.: What's in the mix: phylogenetic classification of metagenome sequence samples. Current Opinion in Microbiology 10, 499-503 (2007) (Pubitemid 350052685)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.5
, pp. 499-503
-
-
McHardy, A.C.1
Rigoutsos, I.2
-
12
-
-
0034238080
-
Image registration by maximization of combined mutual information and gradient information
-
DOI 10.1109/42.876307
-
Pluim, J.P.W., Antoine Maintz, J.B., Viergever, M.A.: Image registration by maximization of combined mutual information and gradient information. IEEE Trans. Med. Imaging 19(8), 809-814 (2000) (Pubitemid 32031207)
-
(2000)
IEEE Transactions on Medical Imaging
, vol.19
, Issue.8
, pp. 809-814
-
-
Pluim, J.P.W.1
Maintz, J.B.A.2
Viergever, M.A.3
-
13
-
-
16644381328
-
Comparative genome assembly
-
Pop, M., Phillippy, A., Delcher, A.L., Salzberg, S.L.: Comparative genome assembly. Briefings in Bioinformatics 5(3), 237-248 (2004)
-
(2004)
Briefings in Bioinformatics
, vol.5
, Issue.3
, pp. 237-248
-
-
Pop, M.1
Phillippy, A.2
Delcher, A.L.3
Salzberg, S.L.4
-
14
-
-
35748976529
-
Get the most out of your metagenome: computational analysis of environmental sequence data
-
DOI 10.1016/j.mib.2007.09.001, PII S1369527407001233, Antimicrobials/Genomics
-
Raes, J., Foerstner, K.U., Bork, P.: Get the most out of your metagenome: computational analysis of environmental sequence data. Current Opinion in Microbiology 10, 490-498 (2007) (Pubitemid 350052690)
-
(2007)
Current Opinion in Microbiology
, vol.10
, Issue.5
, pp. 490-498
-
-
Raes, J.1
Foerstner, K.U.2
Bork, P.3
-
15
-
-
24144437391
-
Efficient RNAi-based gene family knockdown via set cover optimization
-
DOI 10.1016/j.artmed.2005.01.009, PII S093336570500059X, Computational Intelligence Techniques in Bioinformatics
-
Zhao, W., Fanning, M.L., Lane, T.: Efficient RNAi-based gene family knockdown via set cover optimization. Artificial Intelligence in Medicine 35(1-2), 61-73 (2005) (Pubitemid 41242713)
-
(2005)
Artificial Intelligence in Medicine
, vol.35
, Issue.1-2
, pp. 61-73
-
-
Zhao, W.1
Fanning, M.L.2
Lane, T.3
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