Blind identification of evoked human brain activity with independent component analysis of optical data

Human Brain Mapping

Volumn 30, Issue 8, 2009, Pages 2382-2392

  Markham, Joanne ^a   White, Brian R ^a,b   Zeff, Benjamin W ^a   Culver, Joseph P ^a,b  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b WASHINGTON UNIVERSITY   (United States)

Author keywords

Blind source separation; Brain; Diffuse optical tomography; Functional; Hemodynamics; Independent component analysis (ICA); Optical imaging; Visual

Indexed keywords

ADULT; ARTICLE; BRAIN DEPTH STIMULATION; BRAIN MAPPING; CONTROLLED STUDY; CORRELATION COEFFICIENT; DIFFUSE OPTICAL TOMOGRAPHY; EVOKED CORTICAL RESPONSE; FEMALE; HEMODYNAMICS; HUMAN; HUMAN EXPERIMENT; INDEPENDENT COMPONENT ANALYSIS; MALE; NORMAL HUMAN; OCCIPITAL CORTEX; OPTICAL TOMOGRAPHY; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; VISUAL CORTEX;

ADULT; AUTOMATION; CEREBROVASCULAR CIRCULATION; EVOKED POTENTIALS, VISUAL; FEMALE; FOURIER ANALYSIS; HEART; HUMANS; MALE; PHOTIC STIMULATION; PRINCIPAL COMPONENT ANALYSIS; REGIONAL BLOOD FLOW; RESPIRATION; STATISTICS AS TOPIC; TOMOGRAPHY, OPTICAL; VISUAL CORTEX; VISUAL PERCEPTION;

EID: 67650482770     PISSN: 10659471     EISSN: None     Source Type: Journal    
DOI: 10.1002/hbm.20678     Document Type: Article

References (45)

1. Bartels A, Zeki S (2004): The chronoarchitecture of the human brain-Natural viewing conditions reveal a time-based anatomy of the brain. NeuroImage 22:419-433.
2. Bartels A, Zeki S (2005): Brain dynamics during natural viewing conditions-A new guide for mapping connectivity in vivo. NeuroImage 24:339-349.
3. Beckmann CF, DeLuca M, Delvin JT, Smith SM (2005): Investigations into resting-state connectivity using independent component analysis. Philos Trans R Soc Lond B Biol Sci 360:1001-1013.
4. Bell AJ, Sejnowski TJ (1995): An information-maximization approach to blind separation and blind deconvolution. Neural Comput 7:1129-1159.
5. Belouchrani A, Abed-Meraim K, Cardoso JF, Moulines D (1997): A blind source separation technique using second order statistics. IEEE Trans Signal Process 45:434-444.
6. Boas DA, Gaudette T, Strangman G, Cheng XF, Marota JJA, Mandeville JB (2001): The accuracy of near infrared spectroscopy and imaging during focal changes in cerebral hemodynamics. NeuroImage 13:76-90.
7. Bugli C, Lambert P (2007): Comparison between principal component analysis and independent component analysis in electro-encephalograms modelling. Biom J 49:312-327.
8. Calhoun VD, Adali T (2006): Unmixing fMRI with independent component analysis. IEEE Eng Med Biol Mag 25:79-90.
9. Cardoso JF, Souloumiac A (1993): Blind beamforming for non-Gaussian signals. IEE Proceedings-F 140:362-370.
10. Correa N, Adali T, Calhoun VD (2007): Performance of blind source separation algorithms for fMRI analysis using a group ICA method. Magn Reson Imaging 25:684-694.
11. Damoiseaux JS, Rombouts SARB, Barkhof F, Scheltens P, Stam CJ, Smith SM, Beckmann CF (2006): Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci USA 103:13845-13853.
12. Dehghani H, Pogue BW, Poplack SP, Paulsen KD (2003): Multiwavelength three-dimensional near-infrared tomography of the breast: Initial simulation, phantom, and clinical results. Appl Opt 42:135-145.
13. Delac K, Grgic M, Grgic S (2005): Independent comparative study of PCA, ICA, and LDA on the FERET data set. Int J Imaging Syst Technol 15:252-260.
14. Eichele T, Calhoun VD, Moosmann M, Specht K, Jongsma MLA, Quiroga RQ, Nordby H, Hugdahl K (2008): Unmixing concurrent EEG-fMRI with parallel independent component analysis. Int J Psychophysiol 67:222-234.
15. Esposito F, Formisano E, Seifritz E, Goebel R, Morrone R, Tedeschi G, Di Salle F (2002): Spatial independent component analysis of functional MRI time-series: To what extent do results depend on the algorithm used? Hum Brain Mapp 16:146-157.
16. Franceschini MA, Gratton E, Fantini S (1999): Noninvasive optical method of measuring tissue and arterial saturation: An application to absolute pulse oximetry of the brain. Opt Lett 24:829-831.
17. Franceschini MA, Boas DA, Zourabian A, Diamond SG, Nadgir S, Lin DW, Moore JB, Fantini S (2002): Near-infrared spiroximetry: Noninvasive measurements of venous saturation in piglets and human subjects. J App Physiol 92:372-384.
18. Gratton G, Corballis PM (1995): Removing the heart from the brain: Compensation for the pulse artifact in the photon migration signal. Psychophysiology 32:292-299.
19. Grouiller F, Vercueil L, Krainik A, Segebarth C, Kahane P, David O (2007): A comparative study of different artefact removal algorithms for EEG signals acquired during functional MRI. NeuroImage 38:124-137.
20. Hyvärinen A (1999): Fast and robust fixed-point algorithms for independent component analysis. IEEE Trans Neural Netw 10:626-634.
21. Hyvärinen A, Oja E (1997): A fast fixed-point algorithm for independent component analysis. Neural Comput 9:1483-1492.
22. Hyvärinen A, Oja E (2000): Independent component analysis: Algorithms and applications. Neural Netw 13:411-430.
23. Jafri MJ, Pearlson GD, Stevens M, Calhoun VD (2008): A method for functional network connectivity among spatially independent resting-state components in schizophrenia. NeuroImage 39:1666-1681.
24. James CJ, Hesse CW (2005): Independent component analysis for biomedical signals. Physiol Meas 26:R15-R39.
25. Jasdzewski G, Strangman G, Wagner J, Kwong KK, Poldrack RA, Boas DA (2003): Differences in the hemodynamic response to event-related motor and visual paradigms as measured by near-infrared spectroscopy. NeuroImage 20:4:79-488.
26. Jung TP, Makeig S, McKeown MJ, Bell AJ, Lee TW, Sejnowski TJ (2001): Imaging brain dynamics using independent component analysis. Proc IEEE 89:1107-1122.
27. Kohno S, Miyai I, Seiyama A, Oda I, Ishikawa A, Tsuneishi S, Amita T, Shimizu K (2007): Removal of the skin blood flow artifact in functional near-infrared spectroscopic imaging data through independent component analysis. J Biomed Opt 12:062111-1-062111-9.
28. Lee TW, Girolami M, Sejnowski TJ (1999): Independent component analysis using an extended infomax algorithm for mixed subgaussian and supergaussian sources. Neural Comput 11:417-441.
29. Madsen PL, Secher NH (1999): Near-infrared oximetry of the brain. Prog Neurobiol 58:541-560.
30. Mantini D, Perrucci MG, Cugini S, Ferretti A, Romani GL, Del Gratta C (2007a): Complete artifact removal for EEG recorded during continuous fMRI using independent component analysis. NeuroImage 34:598-607.
31. Mantini D, Perrucci MG, Del Gratta C, Romani GL, Corbetta M (2007b): Electrophysiological signatures of resting state networks in the human brain. Proc Natl Acad Sci USA 104:13170-13175.
32. McKeown MJ, Makeig S, Brown GG, Jung T-P, Kindermann SS, Bell AJ, Sejnowski TJ (1998): Analysis of fMRI by blind separation into independent spatial components. Hum Brain Mapp 6:160-188.
33. Moosmann M, Eichele T, Nordby H, Hugdahl K, Calhoun VD (2008): Joint independent component analysis for simultaneous EEG-fMRI: Principle and simulation. Int J Psychophysiol 67:212-221.
34. Morren G, Wolf M, Lemmerling P, Wolf U, Choi JH, Gratton E, De Lathauwer L, Van Huffel S (2004): Detection of fast neuronal signals in the motor cortex from functional near infrared spectroscopy measurements using independent component analysis. Med Biol Eng Comput 42:92-99.
35. Nolte C, Kohl M, Scholz U,Weih M, Villringer A (1998): Characterization of the pulse signal over the human head by near infrared spectroscopy. Adv Exp Med Biol 454:115-123.
36. Onton J, Westerfield M, Townsend J, Makeig S (2006): Imaging human EEG dynamics using independent component analysis. Neurosci Biobehav Rev 30:808-822.
37. Reidl J, Starke J, Omer DB, Grinvald A, Spors H (2007): Independent component analysis of high-resolution imaging data identifies distinct functional domains. NeuroImage 34:94-108.
38. Saager RB, Berger AJ (2005): Direct characterization and removal of interfering absorption trends in two-layer turbid media. J Opt Soc Am A 22:1874-1882.
39. Schiessl I, Stetter M, Mayhew JEW, McLoughlin N, Lund JS, Obermayer K (2000): Blind signal separation from optical imaging recordings with extended spatial decorrelation. IEEE Trans Biomed Eng 47:573-577.
40. Schiessl I, Wang W, McLoughlin N (2008): Independent components of the haemodynamic response in intrinsic optical imaging. NeuroImage 39:634-646.
41. Taga G, Konishi Y, Maki A, Tachibana T, Fujiwara M, Koizumi H (2000): Spontaneous oscillation of oxy- and deoxy- hemoglobin changes with a phase difference throughout the occipital cortex of newborn infants observed using non-invasive optical topography. Neurosci Lett 282:101-104.
42. Tresch MC, Cheung VCK, d'Avella A (2006): Matrix factorization algorithms for the identification of muscle synergies: Evaluation on simulated and experimental data sets. J Neurophysiol 95:2199-2212.
43. van de Ven VG, Formisano E, Prvulovic D, Roeder CH, Linden DE (2004): Functional connectivity as revealed by spatial independent component analysis of fMRI measurements during rest. Hum Brain Mapp 22:165-178.
44. Zeff BW, White BR, Dehghani H, Schlaggar BL, Culver JP (2007): Retinotopic mapping of adult human visual cortex with high-density diffuse optical tomography. Proc Natl Acad Sci USA 104:12169-12174.
45. Zhang YH, Brooks DH, Franceschini MA, Boas DA, (2005): Eigenvector-based spatial filtering for reduction of physiological interference in diffuse optical imaging. J Biomed Opt 10: 011014-1-011014-11.