Absidia parricida plays a dominant role in biotrophic fusion parasitism among mucoralean fungi (Zygomycetes): Lentamyces, a new genus for A. parricida and A. zychae

Plant Biology

Volumn 11, Issue 4, 2009, Pages 537-554

  Hoffmann, K ^a   Voigt, K ^a  

^a FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

Author keywords

18S rDNA (SSU); 28S rDNA (LSU); Absidia zychae; Actin; Ancestral character states; Chaetocladium; Mucorales; Multigene genealogies; Parasitella parasitica; Translation elongation factor 1 alpha.

Indexed keywords

RNA 18S;

FUNGUS; INTERSPECIFIC INTERACTION; NEW GENUS; PARASITISM; PHYLOGENY; TAXONOMY;

ABSIDIA; ARTICLE; CLASSIFICATION; FUNGUS; GENETICS; GROWTH, DEVELOPMENT AND AGING; MUCORALES; PHYLOGENY;

ABSIDIA; FUNGI; MUCORALES; PHYLOGENY; RNA, RIBOSOMAL, 18S;

ABSIDIA; ABSIDIA ZYCHAE; CHAETOCLADIUM; CHAETOCLADIUM BREFELDII; CHAETOCLADIUM JONESII; FUNGI; MUCORALES; PARASITELLA PARASITICA; ZYGOMYCETES;

EID: 67650457482     PISSN: 14358603     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1438-8677.2008.00145.x     Document Type: Article

References (71)

1. von Arx J.A. (1983) On Mucoraceae s. str. and other families of the Mucorales. Sydowia, 35, 10 26.
2. Austin D.J., Bu'Lock J.D., Gooday G.W. (1969) Trisporic acids: sexual hormones from Mucor mucedo and Blakeslea trispora. Nature, 223, 1178 1179.
3. Bainier G. (1903) Sur quelques espèces de Mucorinées nouvelles ou peu connues. Bulletin de la Société mycologique de France, 19, 153 172.
4. Benny G.L., Benjamin R.K. (1993) Observations on Thamnidiaceae (Mucorales). VI. Two new species of Dichotomocladium and thezygospores of D. hesseltinei Chaetocladiaeceae. Mycologia, 85, 660 671.
5. Benny G.L., Humber R.A., Morton J.B. (2001). Zygomycota: zygomycetes. In : McLaughlin D.J., McLaughlin E.G., Lemke P.A. (Eds The Mycota VII. Part A. Systematics and Evolution. Springer-Verlag, Berlin, Heidelberg : pp. 113 146.
6. Blakeslee A.F. (1904) Sexual reproduction in the Mucorineae. Proceedings of the American Academy of Arts and Sciences, 40 (4 205 319.
7. Blakeslee A.F., Cartledge J.L. (1927) Sexual dimorphism in Mucorales. II. Interspecific reactions. Botanical Gazette, 84, 51 57.
8. Blakeslee A.F., Cartlege J.L., Welch D.S., Bergner A.D. (1927) Sexual dimorphism in Mucorales: I. Intraspecific reactions. Botanical Gazette, 84, 27 50.
9. Boosalis M.G. (1964) Hyperparasitism. Annual Review of Phytopathology, 2, 363 376.
10. Brefeld O. (1872) Chaetocladium Jones'ii. In : Brefeld O. (Ed Botanische Untersuchungen über Schimmelpilze, Heft 1: Mucor Mucedo, Chaetocladium Jones'ii, Piptocephalis Freseniana, Zygomyceten, Verlag von Arthur Felix, Leipzig : pp. 29 40.
11. Brefeld O. (1881) Chaetocladium fresenianum. In : Brefeld O. (Ed botanische Untersuchungen über Schimmelpilze, Volum 4. Verlag von Arthur Felix, Leipzig : pp. 55 59.
12. Bu'Lock J.D., Drake D., Winstanley D.J. (1972) Specificity and transformations of the trisporic acid series of fungal sex hormones. Phytochemistry, 11, 2011 2018.
13. Burgeff H. (1920) Über den Parasitismus des Chaetocladium und die heterokaryotische Natur von ihm auf Mucorineen erzeugten Gallen. Zeitschrift für Botanik, 12, 1 35.
14. Burgeff H. (1924) Untersuchungen über Sexualität und Parasitismus bei Mucorineen. I. Botanische Abhandlungen, 4, 1 135.
15. Cenis J.L. (1992) Rapid extraction of fungal DNA for PCR amplification. Nucleic Acids Research, 20, 2380.
16. Crous P.W., Gams W., Stalpers J.A., Robert V., Stegehuis G. (2004) MycoBank: an online initiative to launch mycology into the 21st century. Studies in Mycology, 50, 19 22.
17. Einax E., Voigt K. (2003) Oligonucleotide primers for the universal amplification of β-tubulin genes facilitate phylogenetic analyses in the regnum Fungi. Organisms, Diversity and Evolution, 3 (3 185 194.
18. van den Ende H. (1968) Relationship between sexuality and carotene synthesis in Blakeslea trispora. Journal of Bacteriology, 96 (4 1298 1303.
19. Faurel L., Schotter G. (1965) Notes mycologiques VI. - Sur quelques champignons coprophiles d'Afrique Equatoriale. Cahiers de La Maboké, 3, 123 133.
20. Felsenstein J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783 791.
21. Friedrich J., Dandekar T., Wolf M., Müller T. (2005) ProfDist: a tool for the construction of large phylogenetic trees based on profile distances. Bioinformatics, 21 (9 2108 2109.
22. Gooday G.W. (1968) The extraction of a sexual hormone from the mycelium of Mucor mucedo. Phytochemistry, 7, 2103 2105.
23. Hall T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95-98-NT. Nucleic Acids Symposium Series, 41, 95 98.
24. Hesseltine C.W., Anderson P. (1957) Two genera of molds with low temperature growth requirements. Bulletin of the Torrey Botanical Club, 84, 31 45.
25. Hesseltine C.W., Ellis J.J. (1964) The genus Absidia: Gongronella and cylindrical-spored species of Absidia. Mycologia, 56, 568 601.
26. Hesseltine C.W., Ellis J.J. (1966) Species of Absidia with ovoid sporangiospores I. Mycologia, 58, 761 785.
27. Higgins D.G., Sharp P.M. (1988) CLUSTAL: a package for performing multiple sequence alignment on a microcomputer. Gene, 73, 237 244.
28. Higgins D.G., Sharp P.M. (1989) Fast and sensitive multiple sequence alignments on a microcomputer. Computer Applications in the Biosciences, 5 (2 151 153.
29. Hoffmann K., Discher S., Voigt K. (2007) Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic and morphological characters: Thermotolerant Absidia spp. form a coherent group, the Mycocladiaceae fam. nov. Mycological Research, 111, 1169 1183.
30. Huelsenbeck J.P., Ronquist F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics, 17, 754 755.
31. Kellner M., Burmester A., Wöstemeyer A., Wöstemeyer J. (1993) Transfer of genetic information from the mycoparasite Parasitella parasitica to its host Absidia glauca. Current Genetics, 23, 334 337.
32. Kwaśna H., Nirenberg H.I. (2008) Siepmannia, a new genus in the Mucoraceae. Mycologia, 100, 259 274.
33. Kwaśna H., Ward E., Bateman G.L. (2006) Phylogenetic relationships among Zygomycetes from soil based on ITS1-2 rDNA sequences. Mycological Research, 110, 501 510.
34. McNeill J., Barrie F.R., Burdett H.M., Demoulin V., Hawksworth D.L., Marhold K., Nicolson D.H., Prado J., Silva P.C., Skog J.E., Wiersema J.H., Turland N.J. (Eds 2006) International Code of Botanical Nomenclature (Vienna Code). A.R.G. Ganter Verlag, Ruggell, Lichtenstein : pp. 1 568.
35. Miller M.L., Sutter R.P. (1984) Methyl trisporate E. A sex pheromone in Phycomyces blakesleeanus? Journal of Biological Chemistry, 259, 6420 6422.
36. Müller T., Rahmann S., Dandekar T., Wolf M. (2004) Accurate and robust phylogeny estimation based on profile distances: a study of the Chlorophyceae (Chlorophyta). BMC Evolutionary Biology 4 (20 doi :.
37. Muskat J. (1955) Studies in mold fungi in Bavarian and Tunisian soil. I. Microflora ecology. Archiv für Mikrobiologie, 22 (15 1 20.
38. O'Donnell K. (1993) Fusarium and its near relatives. In : Reynolds D.R., Taylor J.W. (Eds The Fungal Holomorph: Mitotic, Meiotic and Pleomorphic Speciation in Fungal Systematics. CAB International, Wallingford : pp. 225 233.
39. O'Donnell K., Cigelnik E., Benny G.L. (1998) Phylogenetic relationships among Harpellales and Kickxellales. Mycologia, 90 (4 624 639.
40. O'Donnell K., Lutzoni F.M., Ward T.J., Benny G.L. (2001) Evolutionary relationships among mucoralean fungi (Zygomycota): Evidence for family polyphyly on a large scale. Mycologia, 93 (2 286 296.
41. Page R.D.M. (1996) TreeView: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences, 12, 357 358.
42. Pagel M., Meade A., Barker D. (2004) Bayesian estimation of ancestral character states on phylogenies. Systematic Biology, 53 (5 673 684.
43. Patil S.D., Kale J.C. (1981) A new species of Circinella van Tiegh. and Le Monn. Current Science, 50, 544.
44. Posada D., Crandall K.A. (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics, 14 (9 817 818.
45. Prillinger H. (1987) Yeasts and anastomoses: their occurrence and implications for the phylogeny of Eumycota. In : Rayner A.D.M., Brasier C.M., Moore D. (Eds Evolutionary Biology of the Fungi. Cambridge University Press, Cambridge : pp. 355 377.
46. Renner O., Muskat J. (1958) Über zwei neue Arten von Absidia aus Tunesien A. parricida und A. tuneta. Planta, 51, 786 802.
47. Robert V., Stegehuis G., Stalpers J. (2005) The MycoBank Engine and Related Databases. http://www.mycobank.org.
48. Rogers J.S., Swofford D.L. (1998) A fast method for approximating maximum likelihoods of phylogenetic trees from nucleotide sequences. Systematic Biology, 47, 77 89.
49. Ronquist F., Huelsenbeck J.P. (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572 1574.
50. Satina S., Blakeslee A.F. (1926) The Mucor parasite Parasitella in relation to sex. Proceedings of the National Academy of Sciences USA, 12, 202 207.
51. Schachtschabel D., Boland W. (2007) Efficient generation of a trisporoid library by combination of synthesis and biotransformation. Journal of Organic Chemistry, 72, 1366 1372.
52. Schachtschabel D., Schimek C., Wöstemeyer J., Boland W. (2005) Biological activity of trisporoids and trisporoid analogues in Mucor mucedo (-). Phytochemistry, 66, 1358 1365.
53. Schipper M.A.A. (1978) (1). On certain species of Mucor with a key to all accepted species, (2). on the genera Rhizomucor and Parasitella. Studies in Mycology, 17, 66 71.
54. Schipper M.A.A. (1990) Notes on Mucorales - I. observations on Absidia. Persoonia, 14, 133 149.
55. Schultze K., Schimek C., Wöstemeyer J., Burmester A. (2005) Sexuality and parasitism share common regulatory pathways in the fungus Parasitella parasitica. Gene, 348, 33 44.
56. Sutter R.P. (1986) Sexual development. In : Cerdá-Olmedo E., Lipson E.D. (Eds Phycomyces. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY : pp. 317 336.
57. Sutter R.P., Whitaker J.P. (1981) Zygophore-stimulating precursors (pheromones) of trisporic acids active in (-) -Phycomyces blakesleeanus. Journal of Biological Chemistry, 256 (5 2334 2341.
58. Sutter R.P., Harrison T.L., Galasko G. (1974) Trisporic acid biosynthesis in Blakeslea trispora via mating type-specific precursors. Journal of Biological Chemistry, 249, 2282 2284.
59. Sutter R.P., Dadok J., Bothner-By A.A., Smith R.R., Mishra P.K. (1989) Cultures of separated mating types of Blakeslea trispora make D and E forms of trisporic acids. Biochemistry, 28, 4060 4066.
60. Swofford D.L. (1998) PAUP*: Phylogenetic Analysis using Parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland, MA.
61. Thaxter R. (1895) Contributions from the Cryptogamic Laboratory of Harvard University. XXIX. New or peculiar American Zygomycetes. I. Dispira. Botanical Gazette (Crawfordsville), 20 (12 513 518.
62. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. (1997) The CLUSTAL-X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25, 4876 4882.
63. van Tieghem P., Le Monnier G. (1873) Recherches sur les Mucorinées. Annales Des Sciences Naturelles, Botanique, Séries v, 17, P. 342, plate 23.
64. Voigt K., Wöstemeyer J. (2000) Reliable amplification of actin genes facilitates deep-level phylogeny. Microbiological Research, 155 (3 179 195.
65. Voigt K., Wöstemeyer J. (2001) Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-1α genes. Gene, 270, 113 120.
66. Voigt K., Cigelnik E., O'Donnell K. (1999) Phylogeny and PCR identification of clinically important zygomycetes based on nuclear ribosomal-DNA sequence data. Journal of Clinical Microbiology, 37 (12 3957 3964.
67. White J.D., Takabe K., Prisbylla M.P. (1985) Stereoselective synthesis of trisporic acid A and B, their methyl esters, and trisporols A and B, hormones and pheromones of mucoraceous fungi. Journal of Organic Chemistry, 50, 5233 5244.
68. White T.J., Bruns T., Lee S., Taylor J. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In : Innis M.A., Gelfand D.H., Sninsky J.J., White T.J. (Eds PCR Protocols: a Guide to Methods and Applications. Academic Press, San Diego, CA : pp. 315 322.
69. Wöstemeyer J. (1985) Strain dependent variation in ribosomal DNA arrangement in Absidia glauca. European Journal of Biochemistry, 146, 443 448.
70. Zycha H. (1935) Mucorineae. Kryptogamenflora der Mark Brandenburg. Pilze II. VIa. Verlag von Gebrüder Borntraeger, Leipzig : pp. 1 264.
71. Zycha H., Siepmann R., Linnemann G. (1969) Mucorales. Eine Beschreibung aller Gattungen und Arten dieser Pilzgruppe. J. Gramer, Lehre : pp. 1 355.