DNA error correcting codes: No crossover.

2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2009 - Proceedings

Volumn , Issue , 2009, Pages 38-45

  Ashlock, Daniel ^a   Houghten, Sheridan K ^b  

^a UNIVERSITY OF GUELPH   (Canada)

^b BROCK UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CROSSOVER EVENTS; CROSSOVER OPERATOR; DISTANCE CONSTRAINTS; ERROR CORRECTING CODE; EVOLUTION STRATEGIES; MULTIPLE SOURCE; SEQUENCING ERRORS;

ARTIFICIAL INTELLIGENCE; BIOINFORMATICS; BIOLOGY; DNA; EVOLUTIONARY ALGORITHMS; GENES; NUCLEIC ACIDS;

ERROR CORRECTION;

EID: 67650394212     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CIBCB.2009.4925705     Document Type: Conference Paper

References (10)

1. D. A. Ashlock and S. Houghten. A novel variation operator for more rapid evolution of dna error correcting codes. In Proceedings of the 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, pages 54-60, Piscataway NJ, 2005. IEEE Press. (Pubitemid 46307923)
2. Daniel Ashlock, Ling Guo, and Fang Qiu. Greedy closure genetic algorithms. In Proceedings of the 2002 Congress on Evolutionary Computation, pages 1296-1301, Piscataway NJ, 2002. IEEE Press.
3. Hans-Georg Beyer. The Theory of Evolution Strategies. Springer, Berlin, 2001.
4. Richard A. Brualdi and Vera Pless. Greedy codes. Journal of Combinatorial Theory(A), 64:10-30, 1993.
5. Jessie K. Campbell . Enumeration and Symmetry of Edit Metric Spaces. PhD thesis, Iowa State University, 2005.
6. Daniel Gusfield. Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology. Cambridge University Press, Boston, 1997.
7. S.K. Houghten, D. Ashlock, and J. Lenarz. Construction of optimal edit-metric codes. In Proceedings of the 2006 IEEE Workshop on Information Theory, pages 259-263, Piscataway NJ, 2006. IEEE Press.
8. Robet J. McEliece . The Theory of Information and Coding. Cambridge University Press, New York, NY, 1977.
9. Joao Meidanis and Joao C. Setabal . Introduction to Computational Molecular Biology. Brooks-Cole, Pacific Grove, CA, 1997.
10. F. Qiu, L. Guo, T.J. Wen, D.A. Ashlock, and P.S. Schnable. Dna sequence-based bar-codes for tracking the origins of ests from a maize cdna library constructed using multiple mrna sources. Plant Physiology, 133:475-481, 2003.