Caldimicrobium rimae gen. nov., sp, nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 5, 2009, Pages 1040-1044

  Miroshnichenko, Margarita L ^a   Lebedinsky, Alexander V ^a   Chernyh, N A ^a   Tourova, Tatyana P ^a   Kolganova, Tatyana V ^b   Spring, Stefan ^c   Bonch Osmolovskaya, Elizaveta A ^a  

^a WINOGRADSKY INSTITUTE OF MICROBIOLOGY   (Russian Federation)

^b INSTITUTE OF BIOENGINEERING   (Russian Federation)

^c LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL; CARBON DIOXIDE; CYTOSINE; FUMARIC ACID; GUANINE; HYDROGEN; MALIC ACID; RNA 16S; SUCCINIC ACID; SULFUR; THIOSULFATE; BACTERIAL DNA;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CALDIMICROBIUM RIMAE; CHEMOLITHOAUTOTROPH; CONTROLLED STUDY; DNA BASE COMPOSITION; DNA ISOLATION; GENE SEQUENCE; GRAM NEGATIVE FACULTATIVELY ANAEROBIC RODS; HYPERTHERMOPHILIC BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; RUSSIAN FEDERATION; SPECIES DIFFERENTIATION; THERMODESULFOBACTERIACEAE; AUTOTROPHY; BACTERIUM IDENTIFICATION; CLASSIFICATION; DNA SEQUENCE; GENETICS; HEAT; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHENOTYPE; PHYLOGENY; PHYSIOLOGY; RNA GENE; SPECIES DIFFERENCE; THERMAL SPRING;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; THERMODESULFOBACTERIACEAE;

AUTOTROPHIC PROCESSES; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; DNA, BACTERIAL; GENES, RRNA; GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS; HOT SPRINGS; HOT TEMPERATURE; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; RNA, RIBOSOMAL, 16S; RUSSIA; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 67649808147     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.006072-0     Document Type: Article

References (17)

1. Bonch-Osmolovskaya, E. A., Sokolova, T. G., Kostrikina, N. A. & Zavarzin, G. A. (1990). Desulfurella acetivorans gen. nov., sp. nov. - a new thermophilic sulfur-reducing eubacterium. Arch Microbiol 153, 151-155.
2. Garrity, G. M. & Holt, J. G. (2001). Phylum BIII. Thermodesulfobacteria phy. nov. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 1, p. 389. Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer.
3. Jeanthon, C., L'Haridon, S., Cueff, V., Banta, A., Reysenbach, A.-L. & Prieur, D. (2002). Thermodesulfobacterium hydrogeniphilum sp. nov., a thermophilic, chemolithoautotrophic, sulfate-reducing bacterium isolated from a deep-sea hydrothermal vent at Guaymas Basin, and emendation of the genus Thermodesulfobacterium. Int J Syst Evol Microbiol 52, 765-772.
4. Kashefi, K., Holmes, D. E., Reysenbach, A.-L. & Lovley, D. R. (2002). Use of Fe(III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov. Appl Environ Microbiol 68, 1735-1742.
5. L'Haridon, S., Reysenbach, A.-L., Tindall, B. J., Schönheit, P., Banta, A., Johnsen, U., Schumann, P., Gambacorta, A., Stackebrandt, E. & Jeanthon, C. (2006). Desulfurobacterium atlanticum sp. nov., Desulfurobacterium pacificum sp. nov. and Thermovibrio guaymasensis sp. nov., three thermophilic members of the Desulfurobacteriaceae fam. nov., a deep branching lineage within the Bacteria. Int J Syst Evol Microbiol 56, 2843-2852.
6. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
7. Marmur, J. & Doty, D. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
8. Moussard, H., L'Haridon, S., Tindall, B. J., Banta, A., Schumann, P., Stackebrandt, E., Reysenbach, A.-L. & Jeanthon, C. (2004). Thermodesulfatator indicus gen. nov., sp. nov., a novel thermophilic chemolithotrophic sulfate-reducing bacterium isolated from the Central Indian Ridge. Int J Syst Evol Microbiol 54, 227-233.
9. Nunoura, T., Oida, H., Misavuki, M. & Suzuki, Y. (2008). Thermosulfidibacter takaii gen. nov., sp. nov., a thermophilic, hydrogen-oxidizing, sulfur-reducing bacterium isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough. Int J Syst Evol Microbiol 58, 659-665.
10. 12-Bedürfnis phototropher Schwefelbacterien. Arch Microbiol 55, 245-256 (in German).
11. Rosanova, E. P. & Pivovarova, T. A. (1988). Reclassification of Desulfovibrio thermophilus (Rosanova and Khudyakova, 1974). Microbiology (English translation of Mikrobiologiia) 57, 102-106.
12. Slobodkin, A. I., Tourova, T. P., Kuznetsov, B. B., Kostrikina, N. A., Chernyh, N. A. & Bonch-Osmolovskaya, E. A. (1999). Thermoanaerobacter siderophilus sp. nov., a novel dissimilatory Fe(III)-reducing, anaerobic, thermophilic bacterium. Int J Syst Bacteriol 49, 1471-1478.
13. Sonne-Hansen, J. & Ahring, B. K. (1999). Thermodesulfobacterium hveragerdense sp. nov and Thermodesulfovibrio islandicus sp. nov., two thermophilic sulfate reducing bacteria isolated from a Icelandic hot spring. Syst Appl Microbiol 22, 559-564.
14. Trüper, H. G. & Schlegel, H. G. (1964). Sulfur metabolism in Thiorhodaceae. I. Quantitative measurements on growing cells of Chromatium okenii. Antonie van Leeuwenhoek 30, 225-238.
15. Vatsurina, A., Badrutdinova, D., Schumann, P., Spring, S. & Vainshtein, M. (2008). Desulfosporosinus hippei sp. nov., a mesophilic sulfate-reducing bacterium isolated from permafrost. Int J Syst Evol Microbiol 58, 1228-1232.
16. Wolin, E. A., Wolin, M. J. & Wolfe, R. S. (1963). Formation of methane by bacterial extracts. J Biol Chem 238, 2882-2886.
17. Zeikus, J. G., Dawson, M. A., Thompson, T. E., Ingvorsen, K. & Hatchikian, E. C. (1983). Microbial ecology of volcanic sulphidogenesis: isolation and characterization of Thermodesulfobacterium commune gen. nov and sp. nov. J Gen Microbiol 129, 1159-1169.