-
1
-
-
2442563573
-
Regulation of the Escherichia coli sigma-dependent envelope stress response
-
Alba, B. M., and C. A. Gross. 2004. Regulation of the Escherichia coli sigma-dependent envelope stress response. Mol. Microbiol. 52:613-619.
-
(2004)
Mol. Microbiol
, vol.52
, pp. 613-619
-
-
Alba, B.M.1
Gross, C.A.2
-
2
-
-
0032844440
-
The mar regulon: Multiple resistance to antibiotics and other toxic chemicals
-
Alekshun, M. N., and S. B. Levy. 1999. The mar regulon: multiple resistance to antibiotics and other toxic chemicals. Trends Microbiol. 7:410-413.
-
(1999)
Trends Microbiol
, vol.7
, pp. 410-413
-
-
Alekshun, M.N.1
Levy, S.B.2
-
3
-
-
0000148162
-
Regulation of chromosomally mediated multiple antibiotic resistance: The mar regulon
-
Alekshun, M. N., and S. B. Levy. 1997. Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon. Antimicrob. Agents Chemother. 41:2067-2075.
-
(1997)
Antimicrob. Agents Chemother
, vol.41
, pp. 2067-2075
-
-
Alekshun, M.N.1
Levy, S.B.2
-
4
-
-
0028200484
-
The dps promoter is activated by OxyR during growth and by IHF and sigma S in stationary phase
-
Altuvia, S., M. Almiron, G. Huisman, R. Kolter, and G. Storz. 1994. The dps promoter is activated by OxyR during growth and by IHF and sigma S in stationary phase. Mol. Microbiol. 13:265-272.
-
(1994)
Mol. Microbiol
, vol.13
, pp. 265-272
-
-
Altuvia, S.1
Almiron, M.2
Huisman, G.3
Kolter, R.4
Storz, G.5
-
5
-
-
0028924091
-
Activation of multiple antibiotic resistance and binding of stress-inducible promoters by Escherichia coli Rob protein
-
Ariza, R. R., Z. Li, N. Ringstad, and B. Demple. 1995. Activation of multiple antibiotic resistance and binding of stress-inducible promoters by Escherichia coli Rob protein. J. Bacteriol. 177:1655-1661.
-
(1995)
J. Bacteriol
, vol.177
, pp. 1655-1661
-
-
Ariza, R.R.1
Li, Z.2
Ringstad, N.3
Demple, B.4
-
6
-
-
31544450286
-
-
Baba, T., T. Ara, M. Hasegawa, Y. Takai, Y. Okumura, M. Baba, K. A. Datsenko, M. Tomita, B. L. Wanner, and H. Mori. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
-
Baba, T., T. Ara, M. Hasegawa, Y. Takai, Y. Okumura, M. Baba, K. A. Datsenko, M. Tomita, B. L. Wanner, and H. Mori. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
-
-
-
-
7
-
-
0034119459
-
Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA
-
Barbosa, T. M., and S. B. Levy. 2000. Differential expression of over 60 chromosomal genes in Escherichia coli by constitutive expression of MarA. J. Bacteriol. 182:3467-3474.
-
(2000)
J. Bacteriol
, vol.182
, pp. 3467-3474
-
-
Barbosa, T.M.1
Levy, S.B.2
-
8
-
-
43149105201
-
Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks
-
Blanchard, J. L., W. Y. Wholey, E. M. Conlon, and P. J. Pomposiello. 2007. Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks. PLoS ONE 2:e1186.
-
(2007)
PLoS ONE
, vol.2
-
-
Blanchard, J.L.1
Wholey, W.Y.2
Conlon, E.M.3
Pomposiello, P.J.4
-
9
-
-
0034911878
-
Phenotype microarrays for high-throughput phenotypic testing and assay of gene function
-
Bochner, B. R., P. Gadzinski, and E. Panomitros. 2001. Phenotype microarrays for high-throughput phenotypic testing and assay of gene function. Genome Res. 11:1246-1255.
-
(2001)
Genome Res
, vol.11
, pp. 1246-1255
-
-
Bochner, B.R.1
Gadzinski, P.2
Panomitros, E.3
-
11
-
-
0030611303
-
The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE
-
De Las Penas, A., L. Connolly, and C. A. Gross. 1997. The sigmaE-mediated response to extracytoplasmic stress in Escherichia coli is transduced by RseA and RseB, two negative regulators of sigmaE. Mol. Microbiol. 24:373-385.
-
(1997)
Mol. Microbiol
, vol.24
, pp. 373-385
-
-
De Las Penas, A.1
Connolly, L.2
Gross, C.A.3
-
12
-
-
0037371328
-
Overexpression of the waaZ gene leads to modification of the structure of the inner core region of Escherichia coli lipopolysaccharide, truncation of the outer core, and reduction of the amount of O polysaccharide on the cell surface
-
Frirdich, E., B. Lindner, O. Holst, and C. Whitfield. 2003. Overexpression of the waaZ gene leads to modification of the structure of the inner core region of Escherichia coli lipopolysaccharide, truncation of the outer core, and reduction of the amount of O polysaccharide on the cell surface. J. Bacteriol. 185:1659-1671.
-
(2003)
J. Bacteriol
, vol.185
, pp. 1659-1671
-
-
Frirdich, E.1
Lindner, B.2
Holst, O.3
Whitfield, C.4
-
13
-
-
0031784033
-
Molecular basis for structural diversity in the core regions of the lipopolysaccharides of Escherichia coli and Salmonella enterica
-
Heinrichs, D. E., J. A. Yethon, and C. Whitfield. 1998. Molecular basis for structural diversity in the core regions of the lipopolysaccharides of Escherichia coli and Salmonella enterica. Mol. Microbiol. 30:221-232.
-
(1998)
Mol. Microbiol
, vol.30
, pp. 221-232
-
-
Heinrichs, D.E.1
Yethon, J.A.2
Whitfield, C.3
-
14
-
-
0033058359
-
The reversed SoxS-binding site upstream of the ribA promoter in Escherichia coli
-
Koh, Y. S., W. H. Chung, J. H. Lee, and J. H. Roe. 1999. The reversed SoxS-binding site upstream of the ribA promoter in Escherichia coli. Mol. Gen. Genet. 261:374-380.
-
(1999)
Mol. Gen. Genet
, vol.261
, pp. 374-380
-
-
Koh, Y.S.1
Chung, W.H.2
Lee, J.H.3
Roe, J.H.4
-
15
-
-
0029844677
-
Dual regulation of the paraquat-inducible gene pqi-5 by SoxS and RpoS in Escherichia coli
-
Koh, Y. S., and J. H. Roe. 1996. Dual regulation of the paraquat-inducible gene pqi-5 by SoxS and RpoS in Escherichia coli. Mol. Microbiol. 22:53-61.
-
(1996)
Mol. Microbiol
, vol.22
, pp. 53-61
-
-
Koh, Y.S.1
Roe, J.H.2
-
16
-
-
34548213103
-
A common mechanism of cellular death induced by bactericidal antibiotics
-
Kohanski, M. A., D. J. Dwyer, B. Hayete, C. A. Lawrence, and J. J. Collins. 2007. A common mechanism of cellular death induced by bactericidal antibiotics. Cell 130:797-810.
-
(2007)
Cell
, vol.130
, pp. 797-810
-
-
Kohanski, M.A.1
Dwyer, D.J.2
Hayete, B.3
Lawrence, C.A.4
Collins, J.J.5
-
17
-
-
0038540118
-
A reducing system of the superoxide sensor SoxR in Escherichia coli
-
Koo, M. S., J. H. Lee, S. Y. Rah, W. S. Yeo, J. W. Lee, K. L. Lee, Y. S. Koh, S. O. Kang, and J. H. Roe. 2003. A reducing system of the superoxide sensor SoxR in Escherichia coli. EMBO J. 22:2614-2622.
-
(2003)
EMBO J
, vol.22
, pp. 2614-2622
-
-
Koo, M.S.1
Lee, J.H.2
Rah, S.Y.3
Yeo, W.S.4
Lee, J.W.5
Lee, K.L.6
Koh, Y.S.7
Kang, S.O.8
Roe, J.H.9
-
19
-
-
3042954023
-
Isolation and characterization of paraquat-inducible promoters from Escherichia coli
-
Lee, J. H., and J. H. Roe. 1997. Isolation and characterization of paraquat-inducible promoters from Escherichia coli. J. Microbiol. 35:277-283.
-
(1997)
J. Microbiol
, vol.35
, pp. 277-283
-
-
Lee, J.H.1
Roe, J.H.2
-
20
-
-
0028358807
-
SoxS, an activator of superoxide stress genes in Escherichia coli. Purification and interaction with DNA
-
Li, Z., and B. Demple. 1994. SoxS, an activator of superoxide stress genes in Escherichia coli. Purification and interaction with DNA. J. Biol. Chem. 269:18371-18377.
-
(1994)
J. Biol. Chem
, vol.269
, pp. 18371-18377
-
-
Li, Z.1
Demple, B.2
-
21
-
-
0032746803
-
Structural requirements for marbox function in transcriptional activation of mar/sox/rob regulon promoters in Escherichia coli: Sequence, orientation and spatial relationship to the core promoter
-
Martin, R. G., W. K. Gillette, S. Rhee, and J. L. Rosner. 1999. Structural requirements for marbox function in transcriptional activation of mar/sox/rob regulon promoters in Escherichia coli: sequence, orientation and spatial relationship to the core promoter. Mol. Microbiol. 34:431-441.
-
(1999)
Mol. Microbiol
, vol.34
, pp. 431-441
-
-
Martin, R.G.1
Gillette, W.K.2
Rhee, S.3
Rosner, J.L.4
-
23
-
-
0029765609
-
New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH
-
Missiakas, D., J. M. Betton, and S. Raina. 1996. New components of protein folding in extracytoplasmic compartments of Escherichia coli SurA, FkpA and Skp/OmpH. Mol. Microbiol. 21:871-884.
-
(1996)
Mol. Microbiol
, vol.21
, pp. 871-884
-
-
Missiakas, D.1
Betton, J.M.2
Raina, S.3
-
24
-
-
0031745718
-
The extracytoplasmic function sigma factors: Role and regulation
-
Missiakas, D., and S. Raina. 1998. The extracytoplasmic function sigma factors: role and regulation. Mol. Microbiol. 28:1059-1066.
-
(1998)
Mol. Microbiol
, vol.28
, pp. 1059-1066
-
-
Missiakas, D.1
Raina, S.2
-
25
-
-
0025799808
-
An essential gene of Escherichia coli that has sequence similarity to a chloroplast gene of unknown function
-
Nagano, Y., R. Matsuno, and Y. Sasaki. 1991. An essential gene of Escherichia coli that has sequence similarity to a chloroplast gene of unknown function. Mol. Gen. Genet. 228:62-64.
-
(1991)
Mol. Gen. Genet
, vol.228
, pp. 62-64
-
-
Nagano, Y.1
Matsuno, R.2
Sasaki, Y.3
-
26
-
-
0034977251
-
Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate
-
Pomposiello, P. J., M. H. Bennik, and B. Demple. 2001. Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. J. Bacteriol. 183:3890-3902.
-
(2001)
J. Bacteriol
, vol.183
, pp. 3890-3902
-
-
Pomposiello, P.J.1
Bennik, M.H.2
Demple, B.3
-
27
-
-
0035283587
-
Redox-operated genetic switches: The SoxR and OxyR transcription factors
-
Pomposiello, P. J., and B. Demple. 2001. Redox-operated genetic switches: the SoxR and OxyR transcription factors. Trends Biotechnol. 19:109-114.
-
(2001)
Trends Biotechnol
, vol.19
, pp. 109-114
-
-
Pomposiello, P.J.1
Demple, B.2
-
28
-
-
0004136246
-
-
2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular cloning: A laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
29
-
-
0027202811
-
Genetics of lipopolysaccharide biosynthesis in enteric bacteria
-
Schnaitman, C. A., and J. D. Klena. 1993. Genetics of lipopolysaccharide biosynthesis in enteric bacteria. Microbiol. Rev. 57:655-682.
-
(1993)
Microbiol. Rev
, vol.57
, pp. 655-682
-
-
Schnaitman, C.A.1
Klena, J.D.2
-
30
-
-
0027478123
-
Molecular genetics of aminoglycoside resistance genes and familial relationships of the aminoglycoside-modifying enzymes
-
Shaw, K. J., P. N. Rather, R. S. Hare, and G. H. Miller. 1993. Molecular genetics of aminoglycoside resistance genes and familial relationships of the aminoglycoside-modifying enzymes. Microbiol. Rev. 57:138-163.
-
(1993)
Microbiol. Rev
, vol.57
, pp. 138-163
-
-
Shaw, K.J.1
Rather, P.N.2
Hare, R.S.3
Miller, G.H.4
-
31
-
-
0004214698
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Silhavy, T. S., M. L. Berman, and L. W. Enquist. 1984. Experiments with gene fusions. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1984)
Experiments with gene fusions
-
-
Silhavy, T.S.1
Berman, M.L.2
Enquist, L.W.3
-
32
-
-
0023255472
-
Improved single and multicopy lac-based cloning vectors for protein and operon fusions
-
Simons, R. W., F. Houman, and N. Kleckner. 1987. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53:85-96.
-
(1987)
Gene
, vol.53
, pp. 85-96
-
-
Simons, R.W.1
Houman, F.2
Kleckner, N.3
-
33
-
-
0029295437
-
The MarR repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli: Prototypic member of a family of bacterial regulatory proteins involved in sensing phenolic compounds
-
Sulavik, M. C., L. F. Gambino, and P. F. Miller. 1995. The MarR repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli: prototypic member of a family of bacterial regulatory proteins involved in sensing phenolic compounds. Mol. Med. 1:436-446.
-
(1995)
Mol. Med
, vol.1
, pp. 436-446
-
-
Sulavik, M.C.1
Gambino, L.F.2
Miller, P.F.3
-
34
-
-
14844309359
-
Changes in lipopolysaccharide structure induce the sigma(E)-dependent response of Escherichia coli
-
Tam, C., and D. Missiakas. 2005. Changes in lipopolysaccharide structure induce the sigma(E)-dependent response of Escherichia coli. Mol. Microbiol. 55:1403-1412.
-
(2005)
Mol. Microbiol
, vol.55
, pp. 1403-1412
-
-
Tam, C.1
Missiakas, D.2
-
35
-
-
0020605387
-
Cloning and mapping of the manganese superoxide dismutase gene (sodA) of Escherichia coli K-12
-
Touati, D. 1983. Cloning and mapping of the manganese superoxide dismutase gene (sodA) of Escherichia coli K-12. J. Bacteriol. 155:1078-1087.
-
(1983)
J. Bacteriol
, vol.155
, pp. 1078-1087
-
-
Touati, D.1
-
36
-
-
0025369726
-
soxR, a locus governing a superoxide response regulon in Escherichia coli K-12
-
Tsaneva, I. R., and B. Weiss. 1990. soxR, a locus governing a superoxide response regulon in Escherichia coli K-12. J. Bacteriol. 172:4197-4205.
-
(1990)
J. Bacteriol
, vol.172
, pp. 4197-4205
-
-
Tsaneva, I.R.1
Weiss, B.2
-
37
-
-
0033952321
-
Lipopolysaccharide core phosphates are required for viability and intrinsic drug resistance in Pseudomonas aeruginosa
-
Walsh, A. G., M. J. Matewish, L. L. Burrows, M. A. Monteiro, M. B. Perry, and J. S. Lam. 2000. Lipopolysaccharide core phosphates are required for viability and intrinsic drug resistance in Pseudomonas aeruginosa. Mol. Microbiol. 35:718-727.
-
(2000)
Mol. Microbiol
, vol.35
, pp. 718-727
-
-
Walsh, A.G.1
Matewish, M.J.2
Burrows, L.L.3
Monteiro, M.A.4
Perry, M.B.5
Lam, J.S.6
-
38
-
-
0026638855
-
Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli
-
Wu, J., and B. Weiss. 1992. Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli. J. Bacteriol. 174:3915-3920.
-
(1992)
J. Bacteriol
, vol.174
, pp. 3915-3920
-
-
Wu, J.1
Weiss, B.2
-
39
-
-
0033929065
-
Salmonella enterica serovar Typhimurium waaP mutants show increased susceptibility to polymyxin and loss of virulence in vivo
-
Yethon, J. A., J. S. Gunn, R. K. Ernst, S. I. Miller, L. Laroche, D. Malo, and C. Whitfield. 2000. Salmonella enterica serovar Typhimurium waaP mutants show increased susceptibility to polymyxin and loss of virulence in vivo. Infect. Immun. 68:4485-4491.
-
(2000)
Infect. Immun
, vol.68
, pp. 4485-4491
-
-
Yethon, J.A.1
Gunn, J.S.2
Ernst, R.K.3
Miller, S.I.4
Laroche, L.5
Malo, D.6
Whitfield, C.7
-
40
-
-
0032500578
-
Involvement of waaY, waaQ, and waaP in the modification of Escherichia coli lipopolysaccharide and their role in the formation of a stable outer membrane
-
Yethon, J. A., D. E. Heinrichs, M. A. Monteiro, M. B. Perry, and C. Whitfield. 1998. Involvement of waaY, waaQ, and waaP in the modification of Escherichia coli lipopolysaccharide and their role in the formation of a stable outer membrane. J. Biol. Chem. 273:26310-26316.
-
(1998)
J. Biol. Chem
, vol.273
, pp. 26310-26316
-
-
Yethon, J.A.1
Heinrichs, D.E.2
Monteiro, M.A.3
Perry, M.B.4
Whitfield, C.5
-
41
-
-
0035937190
-
Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability
-
Yethon, J. A., and C. Whitfield. 2001. Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability. J. Biol. Chem. 276:5498-5504.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 5498-5504
-
-
Yethon, J.A.1
Whitfield, C.2
-
42
-
-
0043032929
-
Phenotype microarray analysis of Escherichia coli K-12 mutants with deletions of all two-component systems
-
Zhou, L., X. H. Lei, B. R. Bochner, and B. L. Wanner. 2003. Phenotype microarray analysis of Escherichia coli K-12 mutants with deletions of all two-component systems. J. Bacteriol. 185:4956-4972.
-
(2003)
J. Bacteriol
, vol.185
, pp. 4956-4972
-
-
Zhou, L.1
Lei, X.H.2
Bochner, B.R.3
Wanner, B.L.4
|