Twelve polymorphic microsatellite loci from a dinucleotide-enriched genomic library of Japanese Spanish mackerel (Scomberomorus niphonius)

Conservation Genetics

Volumn 10, Issue 4, 2009, Pages 1167-1169

  Xing, Shi Chao ^a,b   Xu, Gen Bo ^a   Liao, Xiao Lin ^a   Yang, Guan Pin ^b   Chen, Song Lin ^a  

^a YELLOW SEA FISHERIES RESEARCH INSTITUTE   (China)

^b OCEAN UNIVERSITY OF CHINA   (China)

Author keywords

Enriched genomic library; Microsatellite; Scomberomorus niphonius; Spanish mackerel

Indexed keywords

CHROMOSOME; GENETIC VARIATION; HETEROZYGOSITY; PERCIFORM; POLYMORPHISM; POPULATION STRUCTURE; REPRODUCTIVE STRATEGY;

SCOMBEROMORUS; SCOMBEROMORUS NIPHONIUS;

EID: 67649372994     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-008-9735-6     Document Type: Article

References (17)

1. VP Buonaccorsi E Starkey JE Graves 2001 Mitochondrial and nuclear DNA analysis of population subdivision among young-of-the-year Spanish mackerel (Scomberomorus niphonius) from the western Atlantic and Gulf of Mexico Mar Biol (Berlin) 138 37 45 10.1007/s002270000439
2. SL Chen MY Xu XS Ji GC Yu 2004 Cloning and characterization of natural resistance associated macrophage protein (Nramp) cDNA from red sea bream (Pagrus major) Fish Shellfish Immunol 17 305 313 10.1016/j.fsi.2004.04.003
3. SL Chen YG Liu MY Xu J Li 2005 Isolation and characterization of polymorphic microsatellite loci from an EST-library of red sea bream (Chrysophrys major) and cross-species amplification Mol Ecol Notes 5 215 217 10.1111/j.1471-8286.2005.00880.x
4. SL Chen HY Ma Y Jiang XL Liao L Meng 2007 Isolation and characterization of polymorphic microsatellite loci from an EST-library of turbot (Scophthalmus maximus) and cross-species amplification Mol Ecol Notes 7 848 850 10.1111/j.1471-8286.2007.01725.x
5. YY Jiang XY Kong ZN Yu ZM Zhuang XS Jin 2003 Genetic diversity of Scomberomorus niphonius in the Yellow Sea revealed by mtDNA D-loop sequence J Fish Sci China 10 177 183 (in Chinese with English abstract)
6. X Liao D Wang XM Yu WT Li L Cheng JW Wang JG Tong 2007 Characterization of novel microsatellite loci in rare minnow (Gobiocypris rarus) and amplification in closely related species in Gobioninae Conserv Genet 8 1003 1007 10.1007/s10592-006-9222-x
7. X Liao CW Shao YS Tian SL Chen 2007 Polymorphic dinucleotide microsatellites in tongue sole (Cynoglossus semilaevis Günther) Mol Ecol Notes 7 6 1147 1149 10.1111/j.1471-8286.2007.01812.x
8. Y Liu S Chen B Li 2004 Assessing the genetic structure of three Japanese flounder (Paralichthys olivaceus) stocks by microsatellite markers Aquaculture 243 103 111 10.1016/j.aquaculture.2004.10.024
9. Ma H, Chen S, Liao X, Xu T, Ge J (2008) Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of obscure puffer (Takifugu obscurus) and cross-species amplification. Conserv Genet (available online)
10. WR Rice 1989 Analyzing tables of statistical tests Evol Int J Org Evol 43 223 225 10.2307/2409177
11. Rozen S, Skaletsky HJ (2000) Primer 3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, pp 365-386
12. C Van Oosterhout WF Hutchinson DPM Wills P Shipley 2004 MICRO-CHECKER: software for identifying and correcting genotyping errors in mirosatellite data Mol Ecol Notes 4 535 538 10.1111/j.1471-8286.2004.00684.x
13. Xing S, Shao C, Liao X, Tian Y, Chen S (2008) Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of spotted maigre (Nibea albiflora). Conserv Genet (in press)
14. G Xu C Shao X Liao Y Tian S Chen 2008 Isolation and characterization of polymorphic microsatellite loci from so-iuy mullet (Mugil soiuy Basilewsky 1855) Conserv Genet 10 1007 1010
15. Yeh FC, Yang RC, Boyle T (1999) POPGENE version 1.31. Microsoft window-bases freeware for population genetic analysis. Available at www.ualberta.ca/~fyeh/. University of Alberta and the Centre for International Forestry Research
16. L Zane L Bargelloni T Patarnello 2002 Strategies for microsatellite isolation: a review Mol Ecol 11 1 16 10.1046/j.0962-1083.2001.01418.x
17. XS Zhu FP Meng DH He 2006 Purification and partial biochemical characterization of acetylcholinesterase Scomberomorus Niphonius (Cuvier) J Qingdao Univ (E&T) 20 35 41 (in Chinese with English abstract)