Molecular mechanism of seed coat discoloration induced by low temperature in yellow soybean

Plant and Cell Physiology

Volumn 50, Issue 6, 2009, Pages 1090-1098

  Kasai, Atsushi ^a   Ohnishi, Shizen ^b   Yamazaki, Hiroyuki ^b   Funatsuki, Hideyuki ^c   Kurauchi, Tasuku ^a   Matsumoto, Takuro ^a   Yumoto, Setsuzo ^b,d   Senda, Mineo ^a  

^a HIROSAKI UNIVERSITY   (Japan)

^b Tokachi Agricultural Experiment Station S9 2 Shinsei ^*  (Japan)

^c NATIONAL AGRICULTURAL RESEARCH CENTER FOR HOKKAIDO REGION   (Japan)

^d NATIONAL AGRICULTURAL RESEARCH CENTER FOR TOHOKU REGION   (Japan)

Author keywords

CHS genes; Low temperature; PTGS; Seed coat discoloration; Tolerance; Yellow soybean

Indexed keywords

ACYLTRANSFERASE; CHALCONE SYNTHASE; MESSENGER RNA; PLANT RNA; SMALL INTERFERING RNA; VEGETABLE PROTEIN;

ARTICLE; COLD; ENZYMOLOGY; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PIGMENTATION; PLANT GENE; PLANT SEED; SOYBEAN;

ACYLTRANSFERASES; COLD TEMPERATURE; GENES, PLANT; MOLECULAR SEQUENCE DATA; PIGMENTATION; PLANT PROTEINS; RNA, MESSENGER; RNA, PLANT; RNA, SMALL INTERFERING; SEEDS; SOYBEANS;

ANIMALIA; GLYCINE MAX;

EID: 67649308441     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcp061     Document Type: Article

References (28)

1. Akada , S. and Dube , S.K. (1995)Organization of soybean chalcone synthase gene clusters and characterization of a new member of the family. P lant Mol. Biol. 29 : 189 - 199.
2. Bernard , R.L. and Weiss , M.G. (1973)Qualitative genetics. In Soybean: Improvement, Production, and Uses . Edited by Caldwell , B.E. pp. 117- 154. American Society of Agronomy , Madison, WI .
3. Cheetham , M.E. and Caplan , A.J. (1998)Structure, function and evolution of DnaJ: conservation and adaptation of chaperone function . C ell Stress Chaperones 3 : 28 - 36 .
4. Christie , P.J. , Alfenito , M.R. and Walbot , V. (1994)Impact of lowtemperature stress on general phenylpropanoid and anthocyanin pathways: enhancement of transcript abundance and anthocyanin pigmentation in maize seedlings. Planta 194 : 541 - 549.
5. Kasai , A. , Kasai , K. , Yumoto , S. and Senda , M. (2007)Structural features of GmIRCHS, candidate of the I gene inhibiting seed coat pigmentation in soybean: implications for inducing endogenous RNA silencing of chalcone synthase genes . Plant Mol. Biol. 64 : 467 - 479 .
6. Kasai , A. , Watarai , M. , Yumoto , S. , Akada , S. , Ishikawa , R. , Harada , T. , et al. (2004)Influence of PTGS on chalcone synthase gene family in yellow soybean seed coat. Breeding Sci. 54 : 355 - 360.
7. Leyva , A. , Jarillo , J.A. , Salinas , J. and Martinez-Zapter , J.M. (1995) Low temperature induces the accumulation of phenylalanine ammonia-lyase and chalcone synthase mRNAs of Arabidopsis thaliana in a light-dependent manner. Plant Physiol. 108 : 39 - 46.
8. Meister , G. and Tuschl , T. (2004)Mechanisms of gene silencing by double-stranded RNA. N ature 431 : 343 - 349.
9. Miernyk , J.A. (2001)The J-domain proteins of Arabidopsis thaliana: an unexpectedly large and diverse family of chaperones. Cell Stress Chaperones 6 : 209 - 218.
10. Morrison , M.J. , Pietrzak , L.N. and Voldeng , H.D. (1998)Soybean seed coat discoloration in cool-season climates. Agron. J. 90 : 471 - 474.
11. Richards , E. (1987)Preparation of genomic DNA from plant tissue. In Current Protocols in Molecular Biology. Edited by Ausubel , F.M. , Brent , R. , Kingston , R.E. , Moore , D.D. , Seidman , J.G. , Smith , J.A. , et al. pp. 2.3.1 - 2.3.3. Wiley , New York .
12. Senda , M. , Jumonji , A. , Yumoto , S. , Ishikawa , R. , Harada , T. , Niizeki , M. , et al. (2002a) Analysis of the duplicated CHS1 gene related to the suppression of the seed coat pigmentation in yellow soybeans. Theor. Appl. Genet. 104 : 1086 - 1091.
13. Senda , M. , Kasai , A. , Yumoto , S. , Akada , S. , Ishikawa , R. , Harada , T. , et al. (2002b) Sequence divergence at chalcone synthase gene in pigmented seed coat soybean mutants of the Inhibitor locus. Genes Genet. Syst. 77 : 341 - 350.
14. Senda , M. , Masuta , C. , Ohnishi , S. , Goto , K. , Kasai , A. , Sano , T. , et al. (2004) Patterning of virus-infected Glycine max seed coat is associated with suppression of endogenous silencing of chalcone synthase genes. P lant Cell 16 : 807 - 818.
15. Shimizu , T. , Akada , S. , Senda , M. , Ishikawa , R. , Harada , T. , Niizeki , M. , et al. (1999)Enhanced expression and differential inducibility of soybean chalcone synthase genes by supplemental UV-B in darkgrown seedlings. P lant Mol. Biol. 39 : 785 - 795.
16. Sós-Hagedu?s , A. , Lovas , Á. , Kondrák , M. , Kovács , G. and Bánfalvi , Z. (2005) Active RNA silencing at low temperature indicates distinct pathways for antisense-mediated gene-silencing in potato. Plant Mol. Biol. 59 : 595 - 602.
17. Srinivasan , A. and Arihara , J. (1994)Soybean seed discoloration and cracking in response to low temperatures during early reproductive growth. C rop Sci. 34 : 1611 - 1617.
18. Szittya , G. , Silhavy , D. , Molnár , A. , Havelda , Z. , Lovas , Á. , Lakatos , L. , et al. (2003) Low temperature inhibits RNA silencing-mediated defence by the control of siRNA generation. EMBO J. 22 : 633 - 640.
19. Takahashi , R. and Abe , J. (1994)Genetic and linkage analysis of low temperature-induced browning in soybean seed coats. J. Hered. 85 : 447 - 450.
20. Takahashi , R. and Abe , J. (1999)Soybean maturity genes associated with seed coat pigmentation and cracking in response to low temperatures. C rop Sci. 39 : 1657 - 1662.
21. Todd , J.J. and Vodkin , L.O. (1996)Duplications that suppress and deletions that restore expression from a chalcone synthase multigene family. P lant Cell 8 : 687 - 699.
22. Tuteja , J.H. , Clough , S.J. , Chan , W.-C. and Vodkin , L.O. (2004)Tissuespecifi c gene silencing mediated by a naturally occurring chalcone synthase gene cluster in Glycine max. Plant Cell 16 : 819 - 835.
23. Tuteja , J.H. and Vodkin , L.O. (2008)Structural features of the endogenous CHS silencing and target loci in the soybean genome. Crop Sci. 48 : S-49 -S-68.
24. Voinnet , O. (2008)Use, tolerance and avoidance of amplified RNA silencing by plants . T rends Plant Sci. 13 : 317 - 328 .
25. Wang , C.S. , Todd , J.J. and Vodkin , L.O. (1994)Chalcone synthase mRNA and activity are reduced in yellow soybean seed coats with dominant I alleles. P lant Physiol. 105 : 739 - 748.
26. Wang , C.S. and Vodkin , L.O. (1994)Extraction of RNA from tissues containing high levels of procyanidins that bind RNA. Plant Mol . Biol. Rep. 12 : 132 - 145.
27. Wingender , R. , Röhrig , H. , Höricke , C. , Wing , D. and Schell , J. (1989) Different regulation of soybean chalcone synthase genes in plant defence, symbiosis and upon environmental stimuli . Mol. Gen. Genet. 218 : 315 - 322 .
28. Yumoto , S. and Sasaki , K. (1990)Seed coat staining caused by treatment of cool temperature in soybeans with yellow hilum (in Japanese) . Rep. Hokkaido Branch Jpn. Soc. Breed. Hokkaido Branch Crop Sci. Soc . Jpn. 30 : 39. Zabala , G. , Zou , J. , Tuteja , J. , Gonzalez , D.O. , Clough , S.J. and Vodkin , L.O. (2006) Transcriptome changes in the phenylpropanoid pathway of Glycine max in response to Pseudomonas syringae infection. BMC Plant Biol. 6 : 26.