메뉴 건너뛰기




Volumn 25, Issue 13, 2009, Pages 1640-1646

Optimizing static thermodynamic models of transcriptional regulation

Author keywords

[No Author keywords available]

Indexed keywords

DNA; TRANSCRIPTION FACTOR;

EID: 67649230197     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btp283     Document Type: Article
Times cited : (7)

References (13)
  • 1
    • 54949148393 scopus 로고    scopus 로고
    • Stream: Static Thermodynamic REgulAtory Model of transcription
    • Bauer,D.C. and Bailey,T.L. (2008a) Stream: Static Thermodynamic REgulAtory Model of transcription. Bioinformatics, 24, 2544-2545.
    • (2008) Bioinformatics , vol.24 , pp. 2544-2545
    • Bauer, D.C.1    Bailey, T.L.2
  • 2
    • 44049108389 scopus 로고    scopus 로고
    • Studying the functional conservation of cisregulatory modules and their transcriptional output
    • Bauer,D.C. and Bailey,T.L. (2008b) Studying the functional conservation of cisregulatory modules and their transcriptional output. BMC Bioinformatics, 9, 220.
    • (2008) BMC Bioinformatics , vol.9 , pp. 220
    • Bauer, D.C.1    Bailey, T.L.2
  • 3
    • 0342625542 scopus 로고    scopus 로고
    • Parallel simulated annealing by mixing of states
    • Chu,K.-W. et al. (1999) Parallel simulated annealing by mixing of states. J. Comput. Phys., 148, 646-662.
    • (1999) J. Comput. Phys , vol.148 , pp. 646-662
    • Chu, K.-W.1
  • 5
    • 33749137281 scopus 로고    scopus 로고
    • Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene
    • Janssens,H. et al. (2006)Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene. Nat. Genet., 38, 1159-1165.
    • (2006) Nat. Genet , vol.38 , pp. 1159-1165
    • Janssens, H.1
  • 7
    • 41849143338 scopus 로고    scopus 로고
    • Manke,T. et al. (2008) Statistical modeling of transcription factor binding affinities predicts regulatory interactions. PLoS Comput. Biol., 4, e1000039.
    • Manke,T. et al. (2008) Statistical modeling of transcription factor binding affinities predicts regulatory interactions. PLoS Comput. Biol., 4, e1000039.
  • 8
    • 45449097303 scopus 로고    scopus 로고
    • Protein structure prediction using basin-hopping
    • Prentiss,M.C. et al. (2008) Protein structure prediction using basin-hopping. J. Chem. Phys., 128, 225106.
    • (2008) J. Chem. Phys , vol.128 , pp. 225106
    • Prentiss, M.C.1
  • 9
    • 33044497095 scopus 로고    scopus 로고
    • Transcriptional control in Drosophila
    • Reinitz,J. et al. (2003) Transcriptional control in Drosophila. Complexus, 1, 54-64.
    • (2003) Complexus , vol.1 , pp. 54-64
    • Reinitz, J.1
  • 11
    • 38749127589 scopus 로고    scopus 로고
    • Predicting expression patterns from regulatory sequence in Drosophila segmentation
    • Segal,E. et al. (2008). Predicting expression patterns from regulatory sequence in Drosophila segmentation. Nature, 451, 535-540.
    • (2008) Nature , vol.451 , pp. 535-540
    • Segal, E.1
  • 12
    • 0032494751 scopus 로고    scopus 로고
    • Information content and free energy in DNA-protein interactions
    • Stormo,G.D. (1998) Information content and free energy in DNA-protein interactions. J. Theor. Biol., 195, 135-137.
    • (1998) J. Theor. Biol , vol.195 , pp. 135-137
    • Stormo, G.D.1
  • 13
    • 34249722123 scopus 로고    scopus 로고
    • Enhancer responses to similarly distributed antagonistic gradients in development
    • Zinzen,R.P. and Papatsenko,D. (2007) Enhancer responses to similarly distributed antagonistic gradients in development. PLoS Comput. Biol. 3, e84.
    • (2007) PLoS Comput. Biol , vol.3
    • Zinzen, R.P.1    Papatsenko, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.