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Volumn 17, Issue 7, 2009, Pages 967-975

An evaluation of the genetic-matched pair study design using genome-wide SNP data from the European population

(34)  Lu, Timothy Tehua a   Lao, Oscar b   Nothnagel, Michael a   Junge, Olaf a   Freitag Wolf, Sandra a   Caliebe, Amke a   Balascakova, Miroslava c   Bertranpetit, Jaume d   Bindoff, Laurence Albert e   Comas, David d   Holmlund, Gunilla f   Kouvatsi, Anastasia g   Macek, Milan c   Mollet, Isabelle h   Nielsen, Finn i   Parson, Walther j   Palo, Jukka k   Ploski, Rafal l   Sajantila, Antti k   Tagliabracci, Adriano m   more..


Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; CONTROLLED STUDY; EUROPE; GENE MAPPING; GENETIC ANALYSIS; GENOTYPE; HUMAN; MAJOR CLINICAL STUDY; PLESIOMORPHY; POPULATION RESEARCH; POPULATION STRUCTURE; PREDICTION; PRIORITY JOURNAL; SENSITIVITY ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 67649220088     PISSN: 10184813     EISSN: 14765438     Source Type: Journal    
DOI: 10.1038/ejhg.2008.266     Document Type: Article
Times cited : (6)

References (29)
  • 1
    • 34548340684 scopus 로고    scopus 로고
    • GAIN Collaborative Research GroupManolio TA, Rodriguez LL, Brooks L et al: New models of collaboration in genome-wide association studies: The Genetic Association Information Network. Nat Genet 32007; 9: 1045-1051.
    • GAIN Collaborative Research GroupManolio TA, Rodriguez LL, Brooks L et al: New models of collaboration in genome-wide association studies: The Genetic Association Information Network. Nat Genet 32007; 9: 1045-1051.
  • 2
    • 17844411239 scopus 로고    scopus 로고
    • Genetic approaches to studying common diseases and complex traits
    • Hirschhorn JN: Genetic approaches to studying common diseases and complex traits. Pediatr Res 2005; 57: 74R-77R.
    • (2005) Pediatr Res , vol.57
    • Hirschhorn, J.N.1
  • 3
    • 84969213492 scopus 로고    scopus 로고
    • Genome-wide association study of 14 000 cases of seven common diseases and 3000 shared controls
    • The Wellcome Trust Case Control Consortium
    • The Wellcome Trust Case Control Consortium: Genome-wide association study of 14 000 cases of seven common diseases and 3000 shared controls. Nature 2007; 447: 661-678.
    • (2007) Nature , vol.447 , pp. 661-678
  • 4
    • 40749138264 scopus 로고    scopus 로고
    • On the use of general control samples for genome-wide association studies: Genetic matching highlights causal variants
    • Luca D, Ringquist S, Klei L et al: On the use of general control samples for genome-wide association studies: Genetic matching highlights causal variants. Am J Hum Genet 2008; 82: 453-463.
    • (2008) Am J Hum Genet , vol.82 , pp. 453-463
    • Luca, D.1    Ringquist, S.2    Klei, L.3
  • 5
    • 18444405551 scopus 로고    scopus 로고
    • What can mendelian randomisation tell us about modifiable behavioural and environmental exposures?
    • Davey Smith G, Ebrahim S: What can mendelian randomisation tell us about modifiable behavioural and environmental exposures? BMJ 2005; 330: 1076-1079.
    • (2005) BMJ , vol.330 , pp. 1076-1079
    • Davey Smith, G.1    Ebrahim, S.2
  • 6
    • 0032714352 scopus 로고    scopus 로고
    • Genomic control for association studies
    • Devlin B, Roeder K: Genomic control for association studies. Biometrics 1999; 55: 997-1004.
    • (1999) Biometrics , vol.55 , pp. 997-1004
    • Devlin, B.1    Roeder, K.2
  • 7
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P: Inference of population structure using multilocus genotype data. Genetics 2000; 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 8
    • 13144265739 scopus 로고    scopus 로고
    • Genome-wide association studies: Theoretical and practical concerns
    • Wang WY, Barratt BJ, Clayton DG, Todd JA: Genome-wide association studies: Theoretical and practical concerns. Nat Rev Genet 2005; 6: 109-118.
    • (2005) Nat Rev Genet , vol.6 , pp. 109-118
    • Wang, W.Y.1    Barratt, B.J.2    Clayton, D.G.3    Todd, J.A.4
  • 9
    • 23844472247 scopus 로고    scopus 로고
    • Study_Group: KORA-gen - resource for population genetics, controls and a broad spectrum of disease phenotypes
    • _
    • Wichmann HE, Gieger C, Illig T, MONICA/KORA_Study_Group: KORA-gen - resource for population genetics, controls and a broad spectrum of disease phenotypes. Gesundheitswesen 2005; 67: 26-30.
    • (2005) Gesundheitswesen , vol.67 , pp. 26-30
    • Wichmann, H.E.1    Gieger, C.2    Illig, T.3    MONICA, K.O.R.A.4
  • 10
    • 49649084390 scopus 로고    scopus 로고
    • Correlation between genetic and geographic structure in Europe
    • Lao O, Lu TT, Nothnagel M et al: Correlation between genetic and geographic structure in Europe. Curr Biol 2008; 18: 1241-1248.
    • (2008) Curr Biol , vol.18 , pp. 1241-1248
    • Lao, O.1    Lu, T.T.2    Nothnagel, M.3
  • 11
    • 5344244656 scopus 로고    scopus 로고
    • R Development Core Team:, R Foundation for Statistical Computing: Vienna
    • R Development Core Team: R: A language and environment for statistical computing. R Foundation for Statistical Computing: Vienna, 2008.
    • (2008) R: A language and environment for statistical computing
  • 13
    • 34848869762 scopus 로고    scopus 로고
    • Efficacy assessment of SNP sets for genome-wide disease association studies
    • Wollstein A, Herrmann A, Wittig M et al: Efficacy assessment of SNP sets for genome-wide disease association studies. Nucleic Acids Res 2007; 35: E113.
    • (2007) Nucleic Acids Res , vol.35
    • Wollstein, A.1    Herrmann, A.2    Wittig, M.3
  • 14
    • 48249148358 scopus 로고    scopus 로고
    • Paschou P, Drineas P, Lewis J et al: Tracing sub-structure in the European American population with PCA-informative markers. PLoS Genet 2008; 4: E1000114+.
    • Paschou P, Drineas P, Lewis J et al: Tracing sub-structure in the European American population with PCA-informative markers. PLoS Genet 2008; 4: E1000114+.
  • 15
    • 34848879778 scopus 로고    scopus 로고
    • PCA-correlated SNPs for structure identification in worldwide human populations
    • Paschou P, Ziv E, Burchard EG et al: PCA-correlated SNPs for structure identification in worldwide human populations. PLoS Genet 2007; 3: 1672-1686.
    • (2007) PLoS Genet , vol.3 , pp. 1672-1686
    • Paschou, P.1    Ziv, E.2    Burchard, E.G.3
  • 17
    • 0002741413 scopus 로고
    • Large scale singular value computations
    • Berry MW: Large scale singular value computations. Int J Supercomput Appl 1992; 6: 13-49.
    • (1992) Int J Supercomput Appl , vol.6 , pp. 13-49
    • Berry, M.W.1
  • 19
    • 0034274870 scopus 로고    scopus 로고
    • An open graph visualization system and its applications to software engineering
    • Gansner ER, North SC: An open graph visualization system and its applications to software engineering. Softw Pract Exp 2000; 30 1203-1233.
    • (2000) Softw Pract Exp , vol.30 , pp. 1203-1233
    • Gansner, E.R.1    North, S.C.2
  • 20
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A tool set for whole-genome association and population-based linkage analyses
    • PArcell S, Neale B, Todd-Brown K et al: PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 2007; 81: 559- 575.
    • (2007) Am J Hum Genet , vol.81 , pp. 559-575
    • PArcell, S.1    Neale, B.2    Todd-Brown, K.3
  • 21
    • 40749148586 scopus 로고    scopus 로고
    • Three genome-wide association studies and a linkage analysis identify HERC2 as a human iris color gene
    • Kayser M, Liu F, Janssens AC et al: Three genome-wide association studies and a linkage analysis identify HERC2 as a human iris color gene. Am J Hum Genet 2008; 82: 411-423.
    • (2008) Am J Hum Genet , vol.82 , pp. 411-423
    • Kayser, M.1    Liu, F.2    Janssens, A.C.3
  • 22
    • 33846617194 scopus 로고    scopus 로고
    • A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation
    • Duffy DL, Montgomery GW, Chen W et al: A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation. Am J Hum Genet 2007; 80: 241-252.
    • (2007) Am J Hum Genet , vol.80 , pp. 241-252
    • Duffy, D.L.1    Montgomery, G.W.2    Chen, W.3
  • 23
    • 2442677652 scopus 로고    scopus 로고
    • Genetic signatures of strong recent positive selection at the lactase gene
    • Bersaglieri T, Sabeti PC, Patterson N et al: Genetic signatures of strong recent positive selection at the lactase gene. Am J Hum Genet 2004; 74: 1111-1120.
    • (2004) Am J Hum Genet , vol.74 , pp. 1111-1120
    • Bersaglieri, T.1    Sabeti, P.C.2    Patterson, N.3
  • 25
    • 34247602437 scopus 로고    scopus 로고
    • Measuring European population stratification with microarray genotype data
    • Bauchet M, McEvoy B, Pearson LN et al: Measuring European population stratification with microarray genotype data. Am J Hum Genet 2007; 80: 948-956.
    • (2007) Am J Hum Genet , vol.80 , pp. 948-956
    • Bauchet, M.1    McEvoy, B.2    Pearson, L.N.3
  • 26
    • 38949104183 scopus 로고    scopus 로고
    • Discerning the ancestry of European Americans in genetic association studies
    • Price AL, Butler J, Patterson N et al: Discerning the ancestry of European Americans in genetic association studies. PLoS Genet 2008; 4: E236.
    • (2008) PLoS Genet , vol.4
    • Price, A.L.1    Butler, J.2    Patterson, N.3
  • 27
    • 33749372240 scopus 로고    scopus 로고
    • European population substructure: Clustering of northern and southern populations
    • Seldin MF, Shigeta R, Villoslada P et al: European population substructure: Clustering of northern and southern populations. PLoS Genet 2006; 2: E143.
    • (2006) PLoS Genet , vol.2
    • Seldin, M.F.1    Shigeta, R.2    Villoslada, P.3
  • 28
    • 34250861441 scopus 로고    scopus 로고
    • A genomewide single-nucleotide-polymorphism panel for Mexican American admixture mapping
    • Tian C, Hinds DA, Shigeta R et al: A genomewide single-nucleotide-polymorphism panel for Mexican American admixture mapping. Am J Hum Genet 2007; 80: 1014-1023.
    • (2007) Am J Hum Genet , vol.80 , pp. 1014-1023
    • Tian, C.1    Hinds, D.A.2    Shigeta, R.3
  • 29
    • 56749169214 scopus 로고    scopus 로고
    • Investigation of the fine structure of European populations with applications to disease association studies
    • Heath SC, Gut IG, Brennan P et al: Investigation of the fine structure of European populations with applications to disease association studies. Eur J Hum Genet 2008; 16: 1413-1429.
    • (2008) Eur J Hum Genet , vol.16 , pp. 1413-1429
    • Heath, S.C.1    Gut, I.G.2    Brennan, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.