Fast interactive integration of cross-sectional image datasets and surface data for morphometric analysis

Studies in Health Technology and Informatics

Volumn 142, Issue , 2009, Pages 183-188

  Meruvia Pastor, Oscar ^a   Soh, Jung ^a   Xiao, Mei ^a   Schmidt, Eric ^a   Logan, Cairine ^a   Boughner, Julia C ^a   Jones, Nicholas ^a   Osborn, David ^a   Santiago, Johanna ^a   Gittleman, Julian ^a   Hallgrímsson, Benedikt ^a   Sensen, Christoph W ^a  

^a UNIVERSITY OF CALGARY   (Canada)

Author keywords

3D surface reconstruction; Histology; Image registration; Mouse development; Parallel processing

Indexed keywords

CELL PROLIFERATION; CUTTING TOOLS; DATA VISUALIZATION; HISTOLOGY; IMAGE ANALYSIS; IMAGE RECONSTRUCTION; IMAGE REGISTRATION; MAMMALS; PHOTOGRAPHY; SURFACE RECONSTRUCTION; TISSUE; VIRTUAL REALITY;

3D SURFACE RECONSTRUCTION; CROSS SECTIONAL IMAGE; HIGH RESOLUTION IMAGE; MORPHOMETRIC ANALYSIS; MOUSE DEVELOPMENT; PARALLEL PROCESSING; VISUALIZATION AND ANALYSIS; VOLUME RECONSTRUCTION;

COMPUTERIZED TOMOGRAPHY;

ANATOMY; ANIMAL; ARTICLE; CELL PROLIFERATION; CLEFT LIP; COMPUTER ASSISTED TOMOGRAPHY; EMBRYO DEVELOPMENT; METHODOLOGY; MOUSE; PHYSIOLOGY; PRENATAL DEVELOPMENT; THREE DIMENSIONAL IMAGING;

ANATOMY, CROSS-SECTIONAL; ANIMALS; CELL PROLIFERATION; CLEFT LIP; EMBRYONIC DEVELOPMENT; IMAGING, THREE-DIMENSIONAL; MICE; TOMOGRAPHY, X-RAY COMPUTED;

EID: 67549104457     PISSN: 09269630     EISSN: 18798365     Source Type: Book Series    
DOI: 10.3233/978-1-58603-964-6-183     Document Type: Conference Paper

References (7)

1. Yoo, T (ed.) Insight into Images "Principles and Practice for Segmentation, Registration, and Image Analysis" ISBN:1568812175 A.K.Peters, 2004.
2. Karen P.; Jirkovská M.; Tomori Z.; Demjénová E.; Janácek J.; Kubínová L. Three-dimensional computer reconstruction of large tissue volumes based on composing series of high-resolution confocal images by GlueMRC and LinkMRC software. Microscopy Research and Technique Volume 62 Issue 5, pp 415 - 422, Wiley, 2003 http://dx.doi.org/10.1002/jemt.10405
3. Lorensen, W. E.; Cline, H. E. Marching Cubes: A High Resolution 3D Surface Construction Algorithm. SIGGRAPH Computer. Graphics. v.21 n.4, p.163-169, July 1987.
4. Newman, T. S. and Yia, H. "A Survey of the Marching Cubes Algorithm." Computers & Graphics Volume 30, Issue 5, pp 854-879, October 2006. http://dx.doi.org/10.1016/j.cag.2006.07.021
5. Schroeder, W.; Martin, K.; Lorensen, B. The Visualization Toolkit, An Object-Oriented Approach To 3D Graphics, 4th edition, ISBN-10: 193093419X, Kitware, Inc. 2006.
6. Streicher, J.; Weninger, W. J.; Müller, G. B. External marker-based automatic congruencing: A new method of 3D reconstruction from serial sections. The Anatomical Record Volume 248, No 4, pp 583-602, 1997. Wiley-Liss, Inc. http://dx.doi.org/10.1002/(SICI)1097-0185(199708)248:4<583::AID-AR10>3.0. CO;2-L
7. Streicher, J.; Donat, M. A.; Strauss, B.; Sporle, R.; Schughart, K.; Muller, G. B. Computer-based Three-Dimensional Visualization of Developmental Gene Expression. Nature Genetics Volume 25, Issue 2, pp.147 - 152, June 2000. http://dx.doi.org/10.1038/75989