Gene expression profiling of human neural progenitor cells following the serum-induced astrocyte differentiation

Cellular and Molecular Neurobiology

Volumn 29, Issue 3, 2009, Pages 423-438

  Obayashi, Shinya ^a   Tabunoki, Hiroko ^a   Kim, Seung U ^b   Satoh, Jun Ichi ^a  

^a MEIJI PHARMACEUTICAL UNIVERSITY   (Japan)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

Astrocytes; Delta family genes; Human neuronal progenitor cells; ID family genes; Microarray

Indexed keywords

ALPHA CRYSTALLIN; BONE MORPHOGENETIC PROTEIN 4; CONNECTIVE TISSUE GROWTH FACTOR; GLIAL FIBRILLARY ACIDIC PROTEIN; GROWTH ARREST SPECIFIC PROTEIN 1; INHIBITOR OF DIFFERENTIATION 1; INHIBITOR OF DIFFERENTIATION 2; INHIBITOR OF DIFFERENTIATION 3; METEORIN; PLATELET DERIVED GROWTH FACTOR ALPHA RECEPTOR; PROTEIN; PROTEOCHONDROITIN SULFATE; TRANSCRIPTION FACTOR E2A; TRANSCRIPTION FACTOR HES 5; TRANSCRIPTION FACTOR MASH1; TRANSCRIPTION FACTOR SOX4; TRANSFORMING GROWTH FACTOR ALPHA; UNCLASSIFIED DRUG;

ARTICLE; ASTROCYTE; CELL DIFFERENTIATION; CONTROLLED STUDY; CULTURE MEDIUM; FEMALE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; HUMAN; HUMAN CELL; HUMAN CELL CULTURE; HUMAN GENOME; IMMUNOPRECIPITATION; INFANT; MULTIGENE FAMILY; NERVE CELL; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; PROTEIN FUNCTION; STEM CELL; UPREGULATION;

ASTROCYTES; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; BONE MORPHOGENETIC PROTEIN 4; CELL DIFFERENTIATION; CELLS, CULTURED; DOWN-REGULATION; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GLIAL FIBRILLARY ACIDIC PROTEIN; HUMANS; INFANT; INHIBITOR OF DIFFERENTIATION PROTEIN 1; INTERCELLULAR SIGNALING PEPTIDES AND PROTEINS; INTERMEDIATE FILAMENT PROTEINS; MODELS, BIOLOGICAL; NERVE TISSUE PROTEINS; NEURONS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROMOTER REGIONS, GENETIC; REPRODUCIBILITY OF RESULTS; SERUM; STEM CELLS; UP-REGULATION;

BOVINAE; RODENTIA;

EID: 67349238291     PISSN: 02724340     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10571-008-9338-2     Document Type: Article

References (52)

1. PJ Andres-Barquin MC Hernandez TE Hayes RD McKay MA Israel 1997 Id genes encoding inhibitors of transcription are expressed during in vitro astrocyte differentiation and in cell lines derived from astrocytic tumors Cancer Res 57 215 220
2. K Boon JB Edwards CG Eberhart GJ Riggins 2004 Identification of astrocytoma associated genes including cell surface markers BMC Cancer 4 39 10.1186/1471-2407-4-39
3. PM Brguljan V Turk C Nina J Brzin I Krizaj T Popovic 2003 Human brain cathepsin H as a neuropeptide and bradykinin metabolizing enzyme Peptides 24 1977 1984 10.1016/j.peptides.2003.09.018
4. JF Brunet L Grollimund JY Chatton S Lengacher PJ Magistretti JG Villemure L Pellerin 2004 Early acquisition of typical metabolic features upon differentiation of mouse neural stem cells into astrocytes Glia 46 8 17 10.1002/glia.10348
5. L Cai EM Morrow CL Cepko 2000 Misexpression of basic helix-loop-helix genes in the murine cerebral cortex affects cell fate choices and neuronal survival Development 127 3021 3030
6. Y Cai P Wu M Ozen Y Yu J Wang M Ittmann M Liu 2006 Gene expression profiling and analysis of signaling pathways involved in priming and differentiation of human neural stem cells Neuroscience 138 133 148 10.1016/j.neuroscience.2005.11.041
7. A Canellada BG Ramirez T Minami JM Redondo E Cano 2008 Calcium/calcineurin signaling in primary cortical astrocyte cultures: Rcan1-4 and cyclooxygenase-2 as NFAT target genes Glia 56 709 722 10.1002/glia.20647
8. MK Carpenter X Cui ZY Hu J Jackson S Sherman A Seiger LU Wahlberg 1999 In vitro expansion of a multipotent population of human neural progenitor cells Exp Neurol 158 265 278 10.1006/exnr.1999.7098
9. S Casarosa C Fode F Guillemot 1999 Mash1 regulates neurogenesis in the ventral telencephalon Development 126 525 534
10. DS Castro D Skowronska-Krawczyk O Armant IJ Donaldson C Parras C Hunt JA Critchley L Nguyen A Gossler B Göttgens JM Matter F Guillemot 2006 Proneural bHLH and Brn proteins coregulate a neurogenic program through cooperative binding to a conserved DNA motif Dev Cell 11 831 844 10.1016/j.devcel.2006.10.006
11. A Chang A Nishiyama J Peterson J Prineas BD Trapp 2000 NG2-positive oligodendrocyte progenitor cells in adult human brain and multiple sclerosis lesions J Neurosci 20 6404 6412
12. YH Chiang V Silani FC Zhou 1996 Morphological differentiation of astroglial progenitor cells from EGF-responsive neurospheres in response to fetal calf serum, basic fibroblast growth factor, and retinol Cell Transplant 5 179 189 10.1016/0963-6897(95)02043-8
13. G Dennis Jr BT Sherman DA Hosack J Yang W Gao HC Lane RA Lempicki 2003 DAVID: database for annotation, visualization, and integrated discovery Genome Biol 4 R60 10.1186/gb-2003-4-9-r60
14. A Erlandsson M Enarsson K Forsberg-Nilsson 2001 Immature neurons from CNS stem cells proliferate in response to platelet-derived growth factor J Neurosci 21 3483 3491
15. JH Eubanks RS Puranam NW Kleckner B Bettler SF Heinemann JO McNamara 1993 The gene encoding the glutamate receptor subunit GluR5 is located on human chromosome 21q21.1-22.1 in the vicinity of the gene for familial amyotrophic lateral sclerosis Proc Natl Acad Sci USA 90 178 182 10.1073/pnas.90.1.178
16. DL Gordon VM Avery DL Adrian TA Sadlon 1992 Detection of complement protein mRNA in human astrocytes by the polymerase chain reaction J Neurosci Methods 45 191 197 10.1016/0165-0270(92)90076-P
17. A Hollnagel V Oehlmann J Heymer U Rüther A Nordheim 1999 Id genes are direct targets of bone morphogenetic protein induction in embryonic stem cells J Biol Chem 274 19838 19845 10.1074/jbc.274.28.19838
18. M Hoser SL Baader MR Bösl A Ihmer M Wegner E Sock 2007 Prolonged glial expression of Sox4 in the CNS leads to architectural cerebellar defects and ataxia J Neurosci 27 5495 5505 10.1523/JNEUROSCI.1384-07.2007
19. K Ishii M Nakamura H Dai TP Finn H Okano Y Toyama BS Bregman 2006 Neutralization of ciliary neurotrophic factor reduces astrocyte production from transplanted neural stem cells and promotes regeneration of corticospinal tract fibers in spinal cord injury J Neurosci Res 84 1669 1681 10.1002/jnr.21079
20. T Ito N Udaka T Yazawa K Okudela H Hayashi T Sudo F Guillemot R Kageyama H Kitamura 2000 Basic helix-loop-helix transcription factors regulate the neuroendocrine differentiation of fetal mouse pulmonary epithelium Development 127 3913 3921
21. LL Jones RU Margolis MH Tuszynski 2003 The chondroitin sulfate proteoglycans neurocan, brevican, phosphacan, and versican are differentially regulated following spinal cord injury Exp Neurol 182 399 411 10.1016/S0014-4886(03)00087-6
22. R Kageyama T Ohtsuka J Hatakeyama R Ohsawa 2005 Roles of bHLH genes in neural stem cell differentiation Exp Cell Res 306 343 348 10.1016/j.yexcr.2005. 03.015
23. Y Kakinuma H Hama F Sugiyama K Yagami K Goto K Murakami A Fukamizu 1998 Impaired blood-brain barrier function in angiotensinogen-deficient mice Nat Med 4 1078 1080 10.1038/2070
24. K Kodaira M Imada M Goto A Tomoyasu T Fukuda R Kamijo T Suda K Higashio T Katagiri 2006 Purification and identification of a BMP-like factor from bovine serum Biochem Biophys Res Commun 345 1224 1231 10.1016/j.bbrc.2006.05.045
25. K Langlands X Yin G Anand EV Prochownik 1997 Differential interactions of Id proteins with basic-helix-loop-helix transcription factors J Biol Chem 272 19785 19793 10.1074/jbc.272.32.19785
26. Y Liu NR May CM Fan 2001 Growth arrest specific gene 1 is a positive growth regulator for the cerebellum Dev Biol 236 30 45 10.1006/dbio.2000.0146
27. D Lyden AZ Young D Zagzag W Yan W Gerald R O'Reilly BL Bader RO Hynes Y Zhuang K Manova R Benezra 1999 Id1 and Id3 are required for neurogenesis, angiogenesis and vascularization of tumour xenografts Nature 401 670 677 10.1038/44334
28. M Maisel A Herr J Milosevic A Hermann HJ Habisch S Schwarz M Kirsch G Antoniadis R Brenner S Hallmeyer-Elgner H Lerche J Schwarz A Storch 2007 Transcription profiling of adult and fetal human neuroprogenitors identifies divergent paths to maintain the neuroprogenitor cell state Stem Cells 25 1231 1240 10.1634/stemcells.2006-0617
29. C Martin KE Chapman JR Seckl RH Ashley 1998 Partial cloning and differential expression of ryanodine receptor/calcium-release channel genes in human tissues including the hippocampus and cerebellum Neuroscience 85 205 216 10.1016/S0306-4522(97)00612-X
30. G Martino S Pluchino 2006 The therapeutic potential of neural stem cells Nat Rev Neurosci 7 395 406 10.1038/nrn1908
31. K Nakamura W Ohya H Funakoshi G Sakaguchi A Kato M Takeda T Kudo T Nakamura 2006 Possible role of scavenger receptor SRCL in the clearance of amyloid-β in Alzheimer's disease J Neurosci Res 84 874 890 10.1002/jnr.20992
32. K Nakashima T Takizawa W Ochiai M Yanagisawa T Hisatsune M Nakafuku K Miyazono T Kishimoto R Kageyama T Taga 2001 BMP2-mediated alteration in the developmental pathway of fetal mouse brain cells from neurogenesis to astrocytogenesis Proc Natl Acad Sci USA 98 5868 5873 10.1073/pnas.101109698
33. J Nishino K Yamashita H Hashiguchi H Fujii T Shimazaki H Hamada 2004 Meteorin: a secreted protein that regulates glial cell differentiation and promotes axonal extension EMBO J 23 1998 2008 10.1038/sj.emboj.7600202
34. R Pallini LR Vitiani A Bez P Casalbore F Facchiano V Di Giorgi Gerevini ML Falchetti E Fernandez G Maira C Peschle E Parati 2005 Homologous transplantation of neural stem cells to the injured spinal cord of mice Neurosurgery 57 1014 1025 10.1227/01.NEU.0000180058.58372.4c
35. S Probst-Cousin D Kowolik K Kuchelmeister C Kayser B Neundörfer D Heuss 2002 Expression of annexin-1 in multiple sclerosis plaques Neuropathol Appl Neurobiol 28 292 300 10.1046/j.1365-2990.2002.00396.x
36. T Prozorovski U Schulze-Topphoff R Glumm J Baumgart F Schröter O Ninnemann E Siegert I Bendix O Brüstle R Nitsch F Zipp O Aktas 2008 Sirt1 contributes critically to the redox-dependent fate of neural progenitors Nat Cell Biol 10 385 394 10.1038/ncb1700
37. AG Rabchevsky JM Weinitz M Coulpier C Fages M Tinel MP Junier 1998 A role for transforming growth factor alpha as an inducer of astrogliosis J Neurosci 18 10541 10552
38. MB Ruzinova R Benezra 2003 Id proteins in development, cell cycle and cancer Trends Cell Biol 13 410 418 10.1016/S0962-8924(03)00147-8
39. J Samanta JA Kessler 2004 Interactions between ID and OLIG proteins mediate the inhibitory effects of BMP4 on oligodendroglial differentiation Development 131 4131 4412 10.1242/dev.01273
40. H Sato S Ishida K Toda R Matsuda Y Hayashi M Shigetaka M Fukuda Y Wakamatsu A Itai 2005 New approaches to mechanism analysis for drug discovery using DNA microarray data combined with KeyMolnet Curr Drug Discov Technol 2 89 98 10.2174/1570163054064701
41. J Satoh H Tabunoki Y Nanri K Arima T Yamamura 2006 Human astrocytes express 14-3-3 sigma in response to oxidative and DNA-damaging stresses Neurosci Res 56 61 72 10.1016/j.neures.2006.05.007
42. J Satoh H Tabunoki T Yamamura K Arima H Konno 2007 TROY and LINGO-1 expression in astrocytes and macrophages/microglia in multiple sclerosis lesions Neuropathol Appl Neurobiol 33 99 107 10.1111/j.1365-2990.2006.00787.x
43. JM Schwab E Postler TD Nguyen M Mittelbronn R Meyermann HJ Schluesener 2000 Connective tissue growth factor is expressed by a subset of reactive astrocytes in human cerebral infarction Neuropathol Appl Neurobiol 26 434 440 10.1046/j.1365-2990.2000.00271.x
44. S Sergent-Tanguy J Véziers V Bonnamain H Boudin I Neveu P Naveilhan 2006 Cell surface antigens on rat neural progenitors and characterization of the CD3 (+)/CD3 (-) cell populations Differentiation 74 530 541 10.1111/j.1432-0436.2006.00098.x
45. L Tatenhorst V Senner S Püttmann W Paulus 2004 Regulators of G-protein signaling 3 and 4 (RGS3, RGS4) are associated with glioma cell motility J Neuropathol Exp Neurol 63 210 222
46. P Taupin J Ray WH Fischer ST Suhr K Hakansson A Grubb FH Gage 2000 FGF-2-responsive neural stem cell proliferation requires CCg, a novel autocrine/paracrine cofactor Neuron 28 385 397 10.1016/S0896-6273(00)00119-7
47. SF Tzeng J de Vellis 1997 Expression and functional role of the Id HLH family in cultured astrocytes Brain Res Mol Brain Res 46 136 142 10.1016/S0169-328X(96)00294-X
48. D Xu C Hopf R Reddy RW Cho L Guo A Lanahan RS Petralia RJ Wenthold RJ O'Brien P Worley 2003 Narp and NP1 form heterocomplexes that function in developmental and activity-dependent synaptic plasticity Neuron 39 513 528 10.1016/S0896-6273(03)00463-X
49. K Yamagata KI Andreasson H Sugiura E Maru M Dominique Y Irie N Miki Y Hayashi M Yoshioka K Kaneko H Kato PF Worley 1999 Arcadlin is a neural activity-regulated cadherin involved in long term potentiation J Biol Chem 274 19473 19479 10.1074/jbc.274.27.19473
50. R Yamanaka T Arao N Yajima N Tsuchiya J Homma R Tanaka M Sano A Oide M Sekijima K Nishio 2006 Identification of expressed genes characterizing long-term survival in malignant glioma patients Oncogene 25 5994 6002 10.1038/sj.onc.1209585
51. T Yoshimatsu D Kawaguchi K Oishi K Takeda S Akira N Masuyama Y Gotoh 2006 Non-cell-autonomous action of STAT3 in maintenance of neural precursor cells in the mouse neocortex Development 133 2553 2563 10.1242/dev.02419
52. S Yu JZ Zhang Q Xu 2006 Genes associated with neuronal differentiation of precursors from human brain Neuroscience 141 817 825 10.1016/j.neuroscience. 2006.02.080