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Volumn 154, Issue 6, 2009, Pages 1009-1014

Evaluation of the genetic variability of orchid fleck virus by single-strand conformational polymorphism analysis and nucleotide sequencing of a fragment from the nucleocapsid gene

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUSTRALIA; BRAZIL; CLASSIFICATION; CLUSTER ANALYSIS; COSTA RICA; DNA SEQUENCE; GENETICS; GENOTYPE; ISOLATION AND PURIFICATION; ORCHIDACEAE; PHYLOGENY; RHABDOVIRUS; SINGLE STRAND CONFORMATION POLYMORPHISM; VIROLOGY; VIRUS NUCLEOCAPSID;

EID: 67349234147     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-009-0395-8     Document Type: Article
Times cited : (22)

References (32)
  • 1
    • 0036399444 scopus 로고    scopus 로고
    • Genetic variability in the coat protein genes of two orchid viruses: Cymbidium mosaic virus and Odontoglossum ringspot virus
    • DOI 10.1007/s00705-002-0868-5
    • PA Ajjikuttira CL Lim-Ho MH Woon KH Ryu CA Chang CS Loh SM Wong 2002 Genetic variability in the coat protein genes of two orchid viruses: Cymbidium mosaic virus and Odontoglossum ringspot virus Arch Virol 147 1943 1954 (Pubitemid 35218718)
    • (2002) Archives of Virology , vol.147 , Issue.10 , pp. 1943-1954
    • Ajjikuttira, P.A.1    Lim-Ho, C.L.2    Woon, M.H.3    Ryu, K.H.4    Chang, C.A.5    Loh, C.S.6    Wong, S.M.7
  • 2
    • 0020210930 scopus 로고
    • Ultrasensitive staining of nucleic acids with silver
    • LL Beidler PR Hilliard RL Rill 1982 Ultrasensitive staining of nucleic acids with silver Anal Biochem 126 374 380
    • (1982) Anal Biochem , vol.126 , pp. 374-380
    • Beidler, L.L.1    Hilliard, P.R.2    Rill, R.L.3
  • 3
    • 0035723137 scopus 로고    scopus 로고
    • Identification of Orchid fleck virus by reverse transcriptase-polymerase chain reaction and analysis of isolate relationships
    • DOI 10.1046/j.1439-0434.2001.00702.x
    • AL Blanchfield AM Mackenzie A Gibbs H Kondo T Tamada CR Wilson 2001 Identification of Orchid fleck virus by reverse transcriptase-polymerase chain reaction and analysis of isolate relationships J Phytopathol 149 713 718 (Pubitemid 34196856)
    • (2001) Journal of Phytopathology , vol.149 , Issue.11-12 , pp. 713-718
    • Blanchfield, A.L.1    Mackenzie, A.M.2    Gibbs, A.3    Kondo, H.4    Tamada, T.5    Wilson, C.R.6
  • 4
    • 0008557592 scopus 로고
    • Morphology and intracellular appearance of orchid fleck virus
    • MU Chang K Arai Y Doi K Yora 1976 Morphology and intracellular appearance of orchid fleck virus Ann Phytopathol Soc Jpn 42 156 167
    • (1976) Ann Phytopathol Soc Jpn , vol.42 , pp. 156-167
    • Chang, M.U.1    Arai, K.2    Doi, Y.3    Yora, K.4
  • 6
    • 0028358840 scopus 로고
    • Fluctuation of hepatitis C virus quasispecies in persistent infection and interferon treatment revealed by single-strand conformation polymorphism analysis
    • N Enomoto M Kurosaki Y Tanaka F Marumo C Sato 1994 Fluctuation of hepatitis C virus quasispecies in persistent infection and interferon treatment revealed by single-strand conformation polymorphism analysis J Gen Virol 75 1361 1369 (Pubitemid 24174051)
    • (1994) Journal of General Virology , vol.75 , Issue.6 , pp. 1361-1369
    • Enomoto, N.1    Kurosaki, M.2    Tanaka, Y.3    Marumo, F.4    Sato, C.5
  • 7
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • B Ewing L Hillier M Wendl P Green 1998 Basecalling of automated sequencer traces using phred. I. Accuracy assessment Genome Res 8 175 185 (Pubitemid 28177229)
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 8
    • 0030248240 scopus 로고    scopus 로고
    • Genetic diversity in tobacco mild green mosaic tobamovirus infecting the wild plant Nicotiana glauca
    • DOI 10.1006/viro.1996.0463
    • A Fraile JM Malpica MA Aranda E Rodríguez-Cerezo F García-Arenal 1996 Genetic diversity in Tobacco mild green mosaic tobamovirus infecting the wild plant Nicotiana glauca Virology 223 148 155 (Pubitemid 26302054)
    • (1996) Virology , vol.223 , Issue.1 , pp. 148-155
    • Fraile, A.1    Malpica, J.M.2    Aranda, M.A.3    Rodriguez-Cerezo, E.4    Garcia-Arenal, F.5
  • 9
    • 0031042947 scopus 로고    scopus 로고
    • A primer pair for amplifying part of the genome of all potyvirids by RT-PCR
    • DOI 10.1016/S0166-0934(96)02103-9, PII S0166093496021039
    • A Gibbs A Mackenzie 1997 A primer pair for amplifying part of the genome of all potyvirids by RT-PCR J Virol Methods 63 9 16 (Pubitemid 27064452)
    • (1997) Journal of Virological Methods , vol.63 , Issue.1-2 , pp. 9-16
    • Gibbs, A.1    Mackenzie, A.2
  • 13
    • 33947528606 scopus 로고    scopus 로고
    • Low genetic diversity among Cucumber vein yellowing virus isolates from Spain
    • DOI 10.1007/s11262-006-0026-3
    • D Janssen L Velasco G Martín E Segundo IM Cuadrado 2007 Low genetic diversity among cucumber vein yellowing virus isolates from Spain Virus genes 34 367 371 (Pubitemid 46474933)
    • (2007) Virus Genes , vol.34 , Issue.3 , pp. 367-371
    • Janssen, D.1    Velasco, L.2    Martin, G.3    Segundo, E.4    Cuadrado, I.M.5
  • 15
    • 1442264130 scopus 로고    scopus 로고
    • Brevipalpus-transmitted plant virus and virus-like diseases: Cytopathology and some recent cases
    • DOI 10.1023/B:APPA.0000006546.55305.e3
    • EW Kitajima CM Chagas JCV Rodrigues 2003 Brevipalpus-transmitted plant virus and virus-like diseases: cytopathology and some recent cases Exp and Appl Acarology 30 1-3 135 160 (Pubitemid 38995085)
    • (2003) Experimental and Applied Acarology , vol.30 , Issue.1-3 , pp. 135-160
    • Kitajima, E.W.1    Chagas, C.M.2    Rodrigues, J.C.V.3
  • 16
  • 17
    • 1442337647 scopus 로고    scopus 로고
    • Orchid fleck virus: Brevipalpus californicus mite transmission, biological properties and genome structure
    • DOI 10.1023/B:APPA.0000006550.88615.10
    • H Kondo T Maeda T Tamada 2003 Orchid Fleck virus: Brevipalpus californicus transmission, biological properties, and genome structure Exp and Appl Acarology v30 1-3 215 223 (Pubitemid 38995089)
    • (2003) Experimental and Applied Acarology , vol.30 , Issue.1-3 , pp. 215-223
    • Kondo, H.1    Maeda, T.2    Tamada, T.3
  • 18
    • 33746781663 scopus 로고    scopus 로고
    • Orchid fleck virus is a rhabdovirus with an unusual bipartite genome
    • DOI 10.1099/vir.0.81811-0
    • H Kondo T Maeda Y Shirako T Tamada 2006 Orchid fleck virus is a rhabdovirus with an unusual bipartite genome J Gen Virol 87 2413 2421 (Pubitemid 44178118)
    • (2006) Journal of General Virology , vol.87 , Issue.8 , pp. 2413-2421
    • Kondo, H.1    Maeda, T.2    Shirako, Y.3    Tamada, T.4
  • 20
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • S Kumar K Tamura M Nei 2004 MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment Brief Bioinform 5 150 163
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 22
    • 67349170582 scopus 로고    scopus 로고
    • Evidence that orchid fleck virus is efficiently transmitted in a persistent manner by the mite Brevipalpus californicus
    • Maeda T, Kondo H, Misuhata K, Tamada T (1998) Evidence that orchid fleck virus is efficiently transmitted in a persistent manner by the mite Brevipalpus californicus. In: Proceedings of the 7th Int Cong Plant Pathol, pp 13-18
    • (1998) Proceedings of the 7th Int Cong Plant Pathol , pp. 13-18
    • Maeda, T.1    Kondo, H.2    Misuhata, K.3    Tamada, T.4
  • 23
    • 17644383751 scopus 로고    scopus 로고
    • Genetic variability in the coat protein genes of lettuce big-vein associated virus and Mirafiori lettuce big-vein virus
    • DOI 10.1007/s00705-004-0456-y
    • JA Navarro VA Torok HJ Vetten V Pallas 2005 Genetic variability in the coat protein genes of lettuce big-vein associated virus and Mirafiori lettuce big-vein virus Arch Virol 150 681 694 (Pubitemid 40560818)
    • (2005) Archives of Virology , vol.150 , Issue.4 , pp. 681-694
    • Navarro, J.A.1    Torok, V.A.2    Vetten, H.J.3    Pallas, V.4
  • 24
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • M Nei T Gojorobi 1986 Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions Mol Biol Evol 3 5 418 426 (Pubitemid 16010523)
    • (1986) Molecular Biology and Evolution , vol.3 , Issue.5 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 25
    • 0031164829 scopus 로고    scopus 로고
    • Molecular phylogeny of geminivirus infecting wild plants in Japan
    • K Ooi S Ohshita I Ishii T Yahara 1997 Molecular phylogeny of geminivirus infecting wild plants in Japan J Plant Res 110 247 257 (Pubitemid 127167945)
    • (1997) Journal of Plant Research , vol.110 , Issue.1098 , pp. 247-257
    • Ooi, K.1    Ohshita, S.2    Ishii, I.3    Yahara, T.4
  • 27
    • 0033945179 scopus 로고    scopus 로고
    • Insect transmission of plant viruses: A constraint on virus variability
    • DOI 10.1016/S1369-5266(00)00090-X
    • AG Power 2000 Insect transmission of plant viruses: a constraint on virus variability Curr Opin Plant Biol 3 4 336 340 (Pubitemid 30437874)
    • (2000) Current Opinion in Plant Biology , vol.3 , Issue.4 , pp. 336-340
    • Power, A.G.1
  • 28
    • 0030614142 scopus 로고    scopus 로고
    • Mechanisms of plant virus evolution
    • MJ Roossinck 1997 Mechanisms of plant virus evolution Annu Rev Phytopathol 35 191 209
    • (1997) Annu Rev Phytopathol , vol.35 , pp. 191-209
    • Roossinck, M.J.1
  • 29
    • 0035057156 scopus 로고    scopus 로고
    • Geographically distant isolates of the crinivirus Cucurbit yellow stunting disorder virus show very low genetic diversity in the coat protein gene
    • L Rubio Y Abou-Jawdah HX Lin BW Falk 2001 Geographically distant isolates of the crinivirus Cucurbit yellow stunting disorder virus show very low genetic diversity in the coat protein gene J Gen Virol 82 929 933 (Pubitemid 32280052)
    • (2001) Journal of General Virology , vol.82 , Issue.4 , pp. 929-933
    • Rubio, L.1    Abou-Jawdah, Y.2    Lin, H.-X.3    Falk, B.W.4
  • 32
    • 0001059843 scopus 로고
    • Some new, potentially significant viruses of orchids and their probable means of transmission
    • FW Zettler GC Wisler N Elliot J Ko 1987 Some new, potentially significant viruses of orchids and their probable means of transmission Am Orchid Soc Bull 56 1044 1061
    • (1987) Am Orchid Soc Bull , vol.56 , pp. 1044-1061
    • Zettler, F.W.1    Wisler, G.C.2    Elliot, N.3    Ko, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.