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Volumn 19, Issue 3, 2009, Pages 443-448

Nucleobase-specific enhancement of Cy3 fluorescence

Author keywords

Cy dyes; Cy3; DNA; Nucleobases; Nucleosides; Photoisomerization

Indexed keywords

CY DYES; CY3; FLUORESCENCE EFFICIENCY; FLUORESCENCE SPECTRA; NUCLEOBASE; NUCLEOBASES; NUCLEOSIDE MONOPHOSPHATES; NUCLEOSIDES; PHOTOPHYSICAL PROPERTIES; RED SHIFT;

EID: 67349193288     PISSN: 10530509     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10895-008-0431-1     Document Type: Article
Times cited : (57)

References (21)
  • 1
    • 0027976675 scopus 로고
    • The solution structure of the four-way DNA junction at low-salt conditions: A fluorescence resonance energy transfer analysis
    • RM Clegg 1994 The solution structure of the 4-way DNA junction at low-salt conditions-a fluorescence resonance energy-transfer analysis Biophys J 66 1 99 109 (Pubitemid 24016489)
    • (1994) Biophysical Journal , vol.66 , Issue.1 , pp. 99-109
    • Clegg, R.M.1    Murchie, A.I.H.2    Lilley, D.M.J.3
  • 2
    • 0027751968 scopus 로고
    • Conformational distributions of a 4-way DNA junction revealed by time-resolved fluorescence resonance energy-transfer
    • doi:10.1021/bi00213a014
    • PS Eis DP Millar 1993 Conformational distributions of a 4-way DNA junction revealed by time-resolved fluorescence resonance energy-transfer Biochemistry 32 50 13852 13860 doi:10.1021/bi00213a014
    • (1993) Biochemistry , vol.32 , Issue.50 , pp. 13852-13860
    • Eis, P.S.1    Millar, D.P.2
  • 3
    • 0028072693 scopus 로고
    • Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy-transfer
    • doi:10.1073/pnas.91.24.11660
    • C Gohlke 1994 Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy-transfer Proc Natl Acad Sci U S A 91 24 11660 11664 doi:10.1073/pnas.91.24.11660
    • (1994) Proc Natl Acad Sci U S A , vol.91 , Issue.24 , pp. 11660-11664
    • Gohlke, C.1
  • 4
    • 0029960811 scopus 로고    scopus 로고
    • Determination of DNA helical handedness by fluorescence resonance energy transfer
    • doi:10.1006/jmbi.1996.0188
    • EA JaresErijman TM Jovin 1996 Determination of DNA helical handedness by fluorescence resonance energy transfer J Mol Biol 257 3 597 617 doi:10.1006/jmbi.1996.0188
    • (1996) J Mol Biol , vol.257 , Issue.3 , pp. 597-617
    • Jareserijman, E.A.1    Jovin, T.M.2
  • 5
    • 0027973506 scopus 로고
    • A three-dimensional model for the hammerhead ribozyme based on fluorescence measurements
    • T Tuschl 1994 3-dimensional model for the hammerhead ribozyme based on fluorescence measurements Science 266 5186 785 789 doi:10.1126/science.7973630 (Pubitemid 24359283)
    • (1994) Science , vol.266 , Issue.5186 , pp. 785-789
    • Tuschl, T.1    Gohlke, C.2    Jovin, T.M.3    Westhof, E.4    Eckstein, F.5
  • 6
    • 0033823060 scopus 로고    scopus 로고
    • The renaissance of fluorescence resonance energy transfer
    • doi:10.1038/78948
    • PR Selvin 2000 The renaissance of fluorescence resonance energy transfer Nat Struct Biol 7 9 730 734 doi:10.1038/78948
    • (2000) Nat Struct Biol , vol.7 , Issue.9 , pp. 730-734
    • Selvin, P.R.1
  • 7
    • 0034807927 scopus 로고    scopus 로고
    • Single-molecule fluorescence resonance energy transfer
    • doi:10.1006/meth.2001.1217
    • T Ha 2001 Single-molecule fluorescence resonance energy transfer Methods 25 1 78 86 doi:10.1006/meth.2001.1217
    • (2001) Methods , vol.25 , Issue.1 , pp. 78-86
    • Ha, T.1
  • 8
    • 0024600227 scopus 로고
    • Cyanine dye labeling reagents for sulfhydryl-groups
    • doi:10.1002/cyto.990100103
    • LA Ernst 1989 Cyanine dye labeling reagents for sulfhydryl-groups Cytometry 10 1 3 10 doi:10.1002/cyto.990100103
    • (1989) Cytometry , vol.10 , Issue.1 , pp. 3-10
    • Ernst, L.A.1
  • 9
    • 0024537204 scopus 로고
    • Cyanine dye labeling reagents containing isothiocyanate groups
    • doi:10.1002/cyto.990100104
    • RB Mujumdar 1989 Cyanine dye labeling reagents containing isothiocyanate groups Cytometry 10 1 11 19 doi:10.1002/cyto.990100104
    • (1989) Cytometry , vol.10 , Issue.1 , pp. 11-19
    • Mujumdar, R.B.1
  • 10
    • 0034409924 scopus 로고    scopus 로고
    • Synthesis of fluorescently labelled oligonucleotides and nucleic acids
    • doi:10.1039/a905230e
    • MJ Davies 2000 Synthesis of fluorescently labelled oligonucleotides and nucleic acids Chem Soc Rev 29 2 97 107 doi:10.1039/a905230e
    • (2000) Chem Soc Rev , vol.29 , Issue.2 , pp. 97-107
    • Davies, M.J.1
  • 11
    • 34948825980 scopus 로고    scopus 로고
    • Fluorescence properties and photophysics of the sulfoindocyanine Cy3 linked covalently to DNA
    • doi:10.1021/jp072912u
    • ME Sanborn 2007 Fluorescence properties and photophysics of the sulfoindocyanine Cy3 linked covalently to DNA J Phys Chem B 111 37 11064 11074 doi:10.1021/jp072912u
    • (2007) J Phys Chem B , vol.111 , Issue.37 , pp. 11064-11074
    • Sanborn, M.E.1
  • 12
    • 0000735688 scopus 로고
    • Photorelaxation processes in covalently-linked indocarbocyanine and thiacarbocyanine dyes
    • doi:10.1021/j100003a009
    • K Chibisov 1995 Photorelaxation processes in covalently-linked indocarbocyanine and thiacarbocyanine dyes J Phys Chem 99 3 886 893 doi:10.1021/j100003a009
    • (1995) J Phys Chem , vol.99 , Issue.3 , pp. 886-893
    • Chibisov, K.1
  • 13
    • 36749116061 scopus 로고
    • Breakdown of Kramer theory description of photochemical isomerization and the possible involvement of frequency-dependent friction
    • doi:10.1063/1.444549
    • SP Velsko 1983 Breakdown of Kramer theory description of photochemical isomerization and the possible involvement of frequency-dependent friction J Chem Phys 78 1 249 258 doi:10.1063/1.444549
    • (1983) J Chem Phys , vol.78 , Issue.1 , pp. 249-258
    • Velsko, S.P.1
  • 14
    • 0033795017 scopus 로고    scopus 로고
    • Anomalous fluorescence enhancement of Cy3 and Cy3.5 versus anomalous fluorescence loss of Cy5 and Cy7 upon covalent linking to IgG and noncovalent binding to avidin
    • doi:10.1021/bc000015m
    • HJ Gruber 2000 Anomalous fluorescence enhancement of Cy3 and Cy3.5 versus anomalous fluorescence loss of Cy5 and Cy7 upon covalent linking to IgG and noncovalent binding to avidin Bioconjug Chem 11 5 696 704 doi:10.1021/bc000015m
    • (2000) Bioconjug Chem , vol.11 , Issue.5 , pp. 696-704
    • Gruber, H.J.1
  • 16
    • 33751157399 scopus 로고
    • Temperature-dependence of fluorescence and photoisomerization in symmetrical carbocyanines-influence of medium viscosity and molecular-structure
    • doi:10.1021/j100063a020
    • PF Aramendia 1994 Temperature-dependence of fluorescence and photoisomerization in symmetrical carbocyanines-influence of medium viscosity and molecular-structure J Phys Chem 98 12 3165 3173 doi:10.1021/j100063a020
    • (1994) J Phys Chem , vol.98 , Issue.12 , pp. 3165-3173
    • Aramendia, P.F.1
  • 17
    • 0036580669 scopus 로고    scopus 로고
    • Multiplex quantitative PCR using self-quenched primers labeled with a single fluorophore
    • doi:10.1093/nar/30.9.e37
    • I Nazarenko 2002 Multiplex quantitative PCR using self-quenched primers labeled with a single fluorophore Nucleic Acids Res 30 9 e37 doi:10.1093/nar/30.9.e37
    • (2002) Nucleic Acids Res , vol.30 , Issue.9 , pp. 37
    • Nazarenko, I.1
  • 18
    • 33748595282 scopus 로고    scopus 로고
    • Nucleobase-specific quenching of fluorescent dyes. 1. Nucleobase one-electron redox potentials and their Correlation with static and dynamic quenching efficiencies
    • CAM Seidel 1996 Nucleobase-specific quenching of fluorescent dyes. 1. Nucleobase one-electron redox potentials and their correlation with static and dynamic quenching efficiencies J Phys Chem 100 13 5541 5553 doi:10.1021/ jp951507c (Pubitemid 126790528)
    • (1996) Journal of Physical Chemistry , vol.100 , Issue.13 , pp. 5541-5553
    • Seidel, C.A.M.1    Schulz, A.2    Sauer, M.H.M.3
  • 19
    • 0043234727 scopus 로고    scopus 로고
    • Photoinduced electron transfer between fluorescent dyes and guanosine residues in DNA-hairpins
    • doi:10.1021/jp0348068
    • T Heinlein 2003 Photoinduced electron transfer between fluorescent dyes and guanosine residues in DNA-hairpins J Phys Chem B 107 31 7957 7964 doi:10.1021/jp0348068
    • (2003) J Phys Chem B , vol.107 , Issue.31 , pp. 7957-7964
    • Heinlein, T.1
  • 20
    • 0035140955 scopus 로고    scopus 로고
    • Fluorescence-quenching phenomenon by photoinduced electron transfer between a fluorescent dye and a nucleotide base
    • doi:10.2116/analsci.17.155
    • M Torimura 2001 Fluorescence-quenching phenomenon by photoinduced electron transfer between a fluorescent dye and a nucleotide base Anal Sci 17 1 155 160 doi:10.2116/analsci.17.155
    • (2001) Anal Sci , vol.17 , Issue.1 , pp. 155-160
    • Torimura, M.1
  • 21
    • 0034732989 scopus 로고    scopus 로고
    • Location of cyanine-3 on double-stranded DNA: Importance for fluorescence resonance energy transfer studies
    • doi:10.1021/bi992944a
    • DG Norman 2000 Location of cyanine-3 on double-stranded DNA: importance for fluorescence resonance energy transfer studies Biochemistry 39 21 6317 6324 doi:10.1021/bi992944a
    • (2000) Biochemistry , vol.39 , Issue.21 , pp. 6317-6324
    • Norman, D.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.