메뉴 건너뛰기




Volumn 51, Issue 3, 2009, Pages 454-464

Molecular evidence for recent founder populations and human-mediated migration in the barley scald pathogen Rhynchosporium secalis

Author keywords

Anthropogenic migration; Bottleneck; Founder effect; Host jump; Rhynchosporium secalis

Indexed keywords

FUNGAL DNA; MICROSATELLITE DNA;

EID: 67349181007     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2009.03.002     Document Type: Article
Times cited : (71)

References (57)
  • 1
    • 0000847921 scopus 로고    scopus 로고
    • Indices of multilocus linkage disequilibrium
    • Agapow P.M., and Burt A. Indices of multilocus linkage disequilibrium. Mol. Ecol. Notes 1 (2001) 101-102
    • (2001) Mol. Ecol. Notes , vol.1 , pp. 101-102
    • Agapow, P.M.1    Burt, A.2
  • 2
    • 0346094469 scopus 로고    scopus 로고
    • Phylogenetic analysis of globally distributed Mycosphaerella graminicola populations based on three DNA sequence loci
    • Banke S., Peschon A., and McDonald B.A. Phylogenetic analysis of globally distributed Mycosphaerella graminicola populations based on three DNA sequence loci. Fungal Genet. Biol. 41 (2004) 226-238
    • (2004) Fungal Genet. Biol. , vol.41 , pp. 226-238
    • Banke, S.1    Peschon, A.2    McDonald, B.A.3
  • 3
    • 20144371063 scopus 로고    scopus 로고
    • Migration patterns among global populations of the pathogenic fungus Mycosphaerella graminicola
    • Banke S., and McDonald B.A. Migration patterns among global populations of the pathogenic fungus Mycosphaerella graminicola. Mol. Ecol. 14 (2005) 1881-1896
    • (2005) Mol. Ecol. , vol.14 , pp. 1881-1896
    • Banke, S.1    McDonald, B.A.2
  • 4
    • 0001714012 scopus 로고
    • Multilocus structure of natural populations of Hordeum spontaneum
    • Brown A.H.D., Feldman M.W., and Nevo E. Multilocus structure of natural populations of Hordeum spontaneum. Genetics 96 (1980) 523-536
    • (1980) Genetics , vol.96 , pp. 523-536
    • Brown, A.H.D.1    Feldman, M.W.2    Nevo, E.3
  • 5
    • 0037178717 scopus 로고    scopus 로고
    • Epidemiology - Aerial dispersal of pathogens on the global and continental scales and its impact on plant disease
    • Brown J.K.M., and Hovmøller M.S. Epidemiology - Aerial dispersal of pathogens on the global and continental scales and its impact on plant disease. Science 297 (2002) 537-541
    • (2002) Science , vol.297 , pp. 537-541
    • Brown, J.K.M.1    Hovmøller, M.S.2
  • 6
    • 34250754328 scopus 로고    scopus 로고
    • The origin and colonization history of the barley scald pathogen Rhynchosporium secalis
    • Brunner P.C., Schürch S., and McDonald B.A. The origin and colonization history of the barley scald pathogen Rhynchosporium secalis. J. Evol. Biol. 20 (2007) 1311-1321
    • (2007) J. Evol. Biol. , vol.20 , pp. 1311-1321
    • Brunner, P.C.1    Schürch, S.2    McDonald, B.A.3
  • 7
    • 0027975332 scopus 로고
    • Genetic stability in a population of a plant pathogenic fungus over time
    • Chen R.S., Boeger J.M., and McDonald B.A. Genetic stability in a population of a plant pathogenic fungus over time. Mol. Ecol. 3 (1994) 209-218
    • (1994) Mol. Ecol. , vol.3 , pp. 209-218
    • Chen, R.S.1    Boeger, J.M.2    McDonald, B.A.3
  • 9
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet J.M., and Luikart G. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144 (1996) 2001-2014
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 11
    • 0001171343 scopus 로고
    • The role and importance of pathogens in natural plant communities
    • Dinoor A., and Eshed N. The role and importance of pathogens in natural plant communities. Annu. Rev. Phytopathol. 22 (1984) 443-466
    • (1984) Annu. Rev. Phytopathol. , vol.22 , pp. 443-466
    • Dinoor, A.1    Eshed, N.2
  • 12
    • 0029759465 scopus 로고    scopus 로고
    • High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco
    • El Mousadik A., and Petit R.J. High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theor. Appl. Genet. 92 (1996) 832-839
    • (1996) Theor. Appl. Genet. , vol.92 , pp. 832-839
    • El Mousadik, A.1    Petit, R.J.2
  • 13
    • 34247489236 scopus 로고    scopus 로고
    • Asexual genetic exchange in the barley pathogen Rhynchosporium secalis
    • Forgan A.H., Knogge W., and Anderson P.A. Asexual genetic exchange in the barley pathogen Rhynchosporium secalis. Phytopathology 97 (2007) 650-654
    • (2007) Phytopathology , vol.97 , pp. 650-654
    • Forgan, A.H.1    Knogge, W.2    Anderson, P.A.3
  • 14
    • 0034520123 scopus 로고    scopus 로고
    • Microsatellite analysis of a population crash and bottleneck in the Mauna Kea silversword, Argyroxiphium sandwicense ssp. sandwicense (Asteraceae), and its implications for reintroduction
    • Friar E.A., Ladoux T., Roalson E.H., and Robichaux R.H. Microsatellite analysis of a population crash and bottleneck in the Mauna Kea silversword, Argyroxiphium sandwicense ssp. sandwicense (Asteraceae), and its implications for reintroduction. Mol. Ecol. 9 (2000) 2027-2034
    • (2000) Mol. Ecol. , vol.9 , pp. 2027-2034
    • Friar, E.A.1    Ladoux, T.2    Roalson, E.H.3    Robichaux, R.H.4
  • 15
    • 33750217747 scopus 로고    scopus 로고
    • Population genetic structure of Plasmopara viticola after 125 years of colonization in European vineyards
    • Gobbin D., Rumbou A., Linde C.C., and Gessler C. Population genetic structure of Plasmopara viticola after 125 years of colonization in European vineyards. Mol. Plant Pathol. 7 (2006) 519-531
    • (2006) Mol. Plant Pathol. , vol.7 , pp. 519-531
    • Gobbin, D.1    Rumbou, A.2    Linde, C.C.3    Gessler, C.4
  • 16
    • 34547925652 scopus 로고    scopus 로고
    • Patterns of genetic variation in populations of infectious agents
    • Gordo I., and Campos P.R.A. Patterns of genetic variation in populations of infectious agents. BMC Evol. Biol. 7 (2007) 116
    • (2007) BMC Evol. Biol. , vol.7 , pp. 116
    • Gordo, I.1    Campos, P.R.A.2
  • 17
    • 0030859294 scopus 로고    scopus 로고
    • The genetic structure of Escherichia coli populations in feral house mice
    • Gordon D.M. The genetic structure of Escherichia coli populations in feral house mice. Microbiology 143 (1997) 2039-2046
    • (1997) Microbiology , vol.143 , pp. 2039-2046
    • Gordon, D.M.1
  • 18
    • 67349089958 scopus 로고    scopus 로고
    • Goudet, J, 2001. FSTAT, a program to estimate and test gene diversities and fixation indices version 2.9.3, Available from
    • Goudet, J., 2001. FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). Available from: http://www.unil.ch/izea/softwares/fstat.html.
  • 19
    • 3142714474 scopus 로고    scopus 로고
    • Multilocus methods for estimation population sizes, migration rates and divergence times, with application to the divergence of Drosophila pseudoobscura and D. persimilis
    • Hey J., and Nielsen R. Multilocus methods for estimation population sizes, migration rates and divergence times, with application to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics 167 (2004) 747-760
    • (2004) Genetics , vol.167 , pp. 747-760
    • Hey, J.1    Nielsen, R.2
  • 20
    • 0942300465 scopus 로고    scopus 로고
    • The population genetics of a biological control introduction: mitochondrial DNA and microsatellite variation in native and introduced populations of Aphidus ervi, a parisitoid wasp
    • Hufbauer R.A., Bogdanowicz S.M., and Harrison R.G. The population genetics of a biological control introduction: mitochondrial DNA and microsatellite variation in native and introduced populations of Aphidus ervi, a parisitoid wasp. Mol. Ecol. 13 (2004) 337-348
    • (2004) Mol. Ecol. , vol.13 , pp. 337-348
    • Hufbauer, R.A.1    Bogdanowicz, S.M.2    Harrison, R.G.3
  • 21
    • 0000457843 scopus 로고
    • Seed and grasses as possible sources of Rhynchosporium secalis for barley in California
    • Jackson L.F., and Webster R.K. Seed and grasses as possible sources of Rhynchosporium secalis for barley in California. Plant Dis. Rep. 60 (1976) 233-236
    • (1976) Plant Dis. Rep. , vol.60 , pp. 233-236
    • Jackson, L.F.1    Webster, R.K.2
  • 22
    • 0018191975 scopus 로고
    • Stepwise mutation model and distribution of allelic frequencies in a finite population
    • Kimura M., and Ohta T. Stepwise mutation model and distribution of allelic frequencies in a finite population. Proc. Natl. Acad. Sci. USA 75 (1978) 2868-2872
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 2868-2872
    • Kimura, M.1    Ohta, T.2
  • 23
    • 0036845219 scopus 로고    scopus 로고
    • Estimating allelic richness: effects of sample size and bottlenecks
    • Leberg P.L. Estimating allelic richness: effects of sample size and bottlenecks. Mol. Ecol. 11 (2002) 2445-2449
    • (2002) Mol. Ecol. , vol.11 , pp. 2445-2449
    • Leberg, P.L.1
  • 24
    • 0035143327 scopus 로고    scopus 로고
    • A PCR-based assay to detect Rhynchosporium secalis in barley seed
    • Lee H.K., Tewari J.P., and Turkington T.K. A PCR-based assay to detect Rhynchosporium secalis in barley seed. Plant Dis. 85 (2001) 220-225
    • (2001) Plant Dis. , vol.85 , pp. 220-225
    • Lee, H.K.1    Tewari, J.P.2    Turkington, T.K.3
  • 25
    • 0036723575 scopus 로고    scopus 로고
    • Population structure of Mycosphaerella graminicola: from lesions to continents
    • Linde C.C., Zhan J., and McDonald B.A. Population structure of Mycosphaerella graminicola: from lesions to continents. Phytopathology 92 (2002) 946-955
    • (2002) Phytopathology , vol.92 , pp. 946-955
    • Linde, C.C.1    Zhan, J.2    McDonald, B.A.3
  • 26
    • 0141516266 scopus 로고    scopus 로고
    • Further evidence for sexual reproduction in Rhynchosporium secalis based on distribution and frequency of mating-type alleles
    • Linde C.C., Zala M., Ceccarelli S., and McDonald B.A. Further evidence for sexual reproduction in Rhynchosporium secalis based on distribution and frequency of mating-type alleles. Fungal Genet. Biol. 40 (2003) 115-125
    • (2003) Fungal Genet. Biol. , vol.40 , pp. 115-125
    • Linde, C.C.1    Zala, M.2    Ceccarelli, S.3    McDonald, B.A.4
  • 27
    • 28344433794 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellite loci from the barley scald pathogen, Rhynchosporium secalis
    • Linde C.C., Zala M., and McDonald B.A. Isolation and characterization of microsatellite loci from the barley scald pathogen, Rhynchosporium secalis. Mol. Ecol. Notes 5 (2005) 546-548
    • (2005) Mol. Ecol. Notes , vol.5 , pp. 546-548
    • Linde, C.C.1    Zala, M.2    McDonald, B.A.3
  • 28
    • 0031956719 scopus 로고    scopus 로고
    • Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data
    • Luikart G., and Cornuet J.M. Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conserv. Biol. 12 (1998) 228-237
    • (1998) Conserv. Biol. , vol.12 , pp. 228-237
    • Luikart, G.1    Cornuet, J.M.2
  • 29
    • 0032145518 scopus 로고    scopus 로고
    • Usefulness of molecular markers for detecting population bottlenecks via monitoring genetic change
    • Luikart G., Sherwin W.B., Steele B.M., and Allendorf F.W. Usefulness of molecular markers for detecting population bottlenecks via monitoring genetic change. Mol. Ecol. 7 (1998) 963-974
    • (1998) Mol. Ecol. , vol.7 , pp. 963-974
    • Luikart, G.1    Sherwin, W.B.2    Steele, B.M.3    Allendorf, F.W.4
  • 31
    • 0024694465 scopus 로고
    • Genetic variability for pathogenicity, isozyme, ribosomal DNA and colony color variants in populations of Rhynchosporium secalis
    • McDermott J.M., McDonald B.A., Allard R.W., and Webster R.K. Genetic variability for pathogenicity, isozyme, ribosomal DNA and colony color variants in populations of Rhynchosporium secalis. Genetics 122 (1989) 561-565
    • (1989) Genetics , vol.122 , pp. 561-565
    • McDermott, J.M.1    McDonald, B.A.2    Allard, R.W.3    Webster, R.K.4
  • 32
    • 0032792847 scopus 로고    scopus 로고
    • Genetic structure of Rhynchosporium secalis in Australia
    • McDonald B.A., Zhan J., and Burdon J.J. Genetic structure of Rhynchosporium secalis in Australia. Phytopathology 89 (1999) 639-645
    • (1999) Phytopathology , vol.89 , pp. 639-645
    • McDonald, B.A.1    Zhan, J.2    Burdon, J.J.3
  • 33
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA 70 (1973) 3321-3323
    • (1973) Proc. Natl. Acad. Sci. USA , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 34
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89 (1978) 583-590
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 35
    • 0016629918 scopus 로고
    • The bottleneck effect and genetic variability in populations
    • Nei M., Maruyama T., and Chakraborty R. The bottleneck effect and genetic variability in populations. Evolution 29 (1975) 1-10
    • (1975) Evolution , vol.29 , pp. 1-10
    • Nei, M.1    Maruyama, T.2    Chakraborty, R.3
  • 36
    • 0034967295 scopus 로고    scopus 로고
    • Distinguishing migration from isolation: a Markov chain Monte Carlo approach
    • Nielsen R., and Wakeley J. Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics 158 (2001) 885-896
    • (2001) Genetics , vol.158 , pp. 885-896
    • Nielsen, R.1    Wakeley, J.2
  • 37
    • 0003611251 scopus 로고    scopus 로고
    • Population genetic software for teaching and research. Australian National University. Available from:, Canberra
    • Peakall, R., Smouse, P.E., 2001. Genetic analysis in Excel. Population genetic software for teaching and research. Australian National University. Available from: http://www.anu.edu.au/BoZo/GenALEx, Canberra.
    • (2001) Genetic analysis in Excel
    • Peakall, R.1    Smouse, P.E.2
  • 38
    • 1642410112 scopus 로고    scopus 로고
    • ST: analysis of population genetic data for conservation
    • ST: analysis of population genetic data for conservation. Conserv. Genet. 5 (2004) 585-602
    • (2004) Conserv. Genet. , vol.5 , pp. 585-602
    • Pearse, D.E.1    Crandall, K.A.2
  • 39
    • 0031856979 scopus 로고    scopus 로고
    • Identifying populations for conservation on the basis of genetic markers
    • Petit R.J., El Mousadik A., and Pons O. Identifying populations for conservation on the basis of genetic markers. Conserv. Biol. 12 (1998) 844-855
    • (1998) Conserv. Biol. , vol.12 , pp. 844-855
    • Petit, R.J.1    El Mousadik, A.2    Pons, O.3
  • 40
    • 0032880393 scopus 로고    scopus 로고
    • BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data
    • Piry S., Luikart G., and Cornuet J.M. BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data. J. Hered. 90 (1999) 503
    • (1999) J. Hered. , vol.90 , pp. 503
    • Piry, S.1    Luikart, G.2    Cornuet, J.M.3
  • 41
    • 0942267965 scopus 로고    scopus 로고
    • Founder effects and stochastic dispersal at the continental scale of the fungal pathogen of bananas Mycosphaerella fijiensis
    • Rivas G.G., Zapater M.F., Abadie C., and Carlier J. Founder effects and stochastic dispersal at the continental scale of the fungal pathogen of bananas Mycosphaerella fijiensis. Mol. Ecol. 13 (2004) 471-482
    • (2004) Mol. Ecol. , vol.13 , pp. 471-482
    • Rivas, G.G.1    Zapater, M.F.2    Abadie, C.3    Carlier, J.4
  • 42
    • 0033867824 scopus 로고    scopus 로고
    • The genetic structure of field populations of Rhynchosporium secalis from three continents suggests moderate gene flow and regular recombination
    • Salamati S., Zhan J., Burdon J.J., and McDonald B.A. The genetic structure of field populations of Rhynchosporium secalis from three continents suggests moderate gene flow and regular recombination. Phytopathology 90 (2000) 901-908
    • (2000) Phytopathology , vol.90 , pp. 901-908
    • Salamati, S.1    Zhan, J.2    Burdon, J.J.3    McDonald, B.A.4
  • 45
    • 0017725291 scopus 로고    scopus 로고
    • Multivariate analysis of gametic disequilibrium in Yanomama
    • Smouse P.E., and Neel J.V. Multivariate analysis of gametic disequilibrium in Yanomama. Genetics 85 (1997) 733-752
    • (1997) Genetics , vol.85 , pp. 733-752
    • Smouse, P.E.1    Neel, J.V.2
  • 46
    • 0026743963 scopus 로고
    • Hierarchical analysis of linkage disequilibrium in Rhizobium populations: evidence for sex?
    • Souza V., Nguyen T.T., Hudson R.R., Pinero D., and Lenski R.E. Hierarchical analysis of linkage disequilibrium in Rhizobium populations: evidence for sex?. Proc. Natl. Acad. Sci. USA 89 (1992) 8389-8393
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 8389-8393
    • Souza, V.1    Nguyen, T.T.2    Hudson, R.R.3    Pinero, D.4    Lenski, R.E.5
  • 47
    • 0023946176 scopus 로고
    • Genotype diversity: estimation and prediction in samples
    • Stoddart J.A., and Taylor J.F. Genotype diversity: estimation and prediction in samples. Genetics 118 (1988) 705-711
    • (1988) Genetics , vol.118 , pp. 705-711
    • Stoddart, J.A.1    Taylor, J.F.2
  • 48
    • 33846839389 scopus 로고    scopus 로고
    • Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation
    • Stukenbrock E.H., Banke S., Javan-Nikkhah M., and McDonald B.A. Origin and domestication of the fungal wheat pathogen Mycosphaerella graminicola via sympatric speciation. Mol. Biol. Evol. 24 (2007) 398-411
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 398-411
    • Stukenbrock, E.H.1    Banke, S.2    Javan-Nikkhah, M.3    McDonald, B.A.4
  • 49
    • 33747031952 scopus 로고    scopus 로고
    • Global migration patterns in the fungal wheat pathogen Phaeosphaeria nodorum
    • Stukenbrock E.H., Banke S., and McDonald B.A. Global migration patterns in the fungal wheat pathogen Phaeosphaeria nodorum. Mol. Ecol. 15 (2006) 2895-2904
    • (2006) Mol. Ecol. , vol.15 , pp. 2895-2904
    • Stukenbrock, E.H.1    Banke, S.2    McDonald, B.A.3
  • 50
    • 0032693223 scopus 로고    scopus 로고
    • The evolution of asexual fungi: reproduction, speciation and classification
    • Taylor J.W., Jacobson D.J., and Fisher M.C. The evolution of asexual fungi: reproduction, speciation and classification. Ann. Rev. Phytopathol. 37 (1999) 197-246
    • (1999) Ann. Rev. Phytopathol. , vol.37 , pp. 197-246
    • Taylor, J.W.1    Jacobson, D.J.2    Fisher, M.C.3
  • 51
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir B.S., and Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 38 (1984) 1358-1370
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 52
    • 0031669749 scopus 로고    scopus 로고
    • Genealogical inference from microsatellite data
    • Wilson I.J., and Balding D.J. Genealogical inference from microsatellite data. Genetics 150 (1998) 499-510
    • (1998) Genetics , vol.150 , pp. 499-510
    • Wilson, I.J.1    Balding, D.J.2
  • 53
    • 0027140744 scopus 로고
    • Multilocus structure in Pinus contorta Dougl
    • Yang R.-C., and Yeh F.C. Multilocus structure in Pinus contorta Dougl. Theor. Appl. Genet. 87 (1993) 568-576
    • (1993) Theor. Appl. Genet. , vol.87 , pp. 568-576
    • Yang, R.-C.1    Yeh, F.C.2
  • 55
    • 33748066003 scopus 로고    scopus 로고
    • Global hierarchical gene diversity analysis suggests the Fertile Crescent is not the center of origin of the barley scald pathogen Rhynchosporium secalis
    • Zaffarano P.L., McDonald B.A., Zala M., and Linde C.C. Global hierarchical gene diversity analysis suggests the Fertile Crescent is not the center of origin of the barley scald pathogen Rhynchosporium secalis. Phytopathology 96 (2006) 941-950
    • (2006) Phytopathology , vol.96 , pp. 941-950
    • Zaffarano, P.L.1    McDonald, B.A.2    Zala, M.3    Linde, C.C.4
  • 56
    • 44449089555 scopus 로고    scopus 로고
    • Rapid speciation followed host specialization in Rhynchosporium
    • Zaffarano P.L., McDonald B.A., and Linde C.C. Rapid speciation followed host specialization in Rhynchosporium. Evolution 62 (2008) 1418-1436
    • (2008) Evolution , vol.62 , pp. 1418-1436
    • Zaffarano, P.L.1    McDonald, B.A.2    Linde, C.C.3
  • 57
    • 58249132326 scopus 로고    scopus 로고
    • Phylogeographical analyses reveal global migration patterns of the barley scald pathogen Rhynchosporium secalis
    • Zaffarano P.L., McDonald B.A., and Linde C.C. Phylogeographical analyses reveal global migration patterns of the barley scald pathogen Rhynchosporium secalis. Mol. Ecol. 18 (2009) 273-293
    • (2009) Mol. Ecol. , vol.18 , pp. 273-293
    • Zaffarano, P.L.1    McDonald, B.A.2    Linde, C.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.