A PCR-based assessment of genetic diversity, and parentage analysis among commercial mango cultivars and hybrids

Journal of Horticultural Science and Biotechnology

Volumn 82, Issue 6, 2007, Pages 951-959

  Srivastava, Anuj P ^a   Chaandra, Ramesh ^a   Saxena, Sangeeta ^a   Rajan, Shailendra ^a   Ranade, Shirish A ^c   Prasad, Vivek ^b  

^a CENTRAL INSTITUTE FOR SUBTROPICAL HORTICULTURE   (India)

^b CSIR NATIONAL BOTANICAL RESEARCH INSTITUTE   (India)

^c UNIVERSITY OF LUCKNOW   (India)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 67249139525     PISSN: 14620316     EISSN: None     Source Type: Journal    
DOI: 10.1080/14620316.2007.11512332     Document Type: Article

References (31)

1. DELLAPORTA, S. L., WOOD, J. AND HICKS, J. B. (1983). A plant DNA minipreparation: Version II. Plant Molecular Biology Reporter, 1, 19-21.
2. ELADTHONG, W., YONEMORI, K., SUGIURA, A., UTSUNOMIYA, N. AND SUBHADRABANDHU, S. (1999). Identification of mango cultivars of Thailand and evaluation of their genetic variation using the amplified fragments by simple sequence repeat-(SSR)- anchored primers. Scientia Horiculturae, 82, 57-66.
3. EIADTHONG, W., YONEMORI, K., KANZAKI, S. AND SUGIURA, A. (2000). Amplified Fragment Length Polymorphism analysis for studying genetic relationship among Mangifera species in Thailand. Journal of the American Society for Horticultural Science, 125, 160-164.
4. GANGOLLY, S. R., SINGH, R., KATAYAL, S. L. AND SINGH, D. (1957). The mango. Indian Council of Agricultural Research, New Delhi, India. 530 pp.
5. GUPTA, M., CHYI, Y. S., ROMERO-SEVERSON, J. AND OWEN, J. L. (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of SSRs. Theoretical and Applied Genetics, 89, 998-1006.
6. HEATH, D. D., IWANA, G. K. AND DELVIN, R. H. (1993). PCR primed with VNTR core sequences yield species specific patterns and hypervariable probes. Nucleic Acids Research, 21, 5782-5785.
7. HEMANTKUMAR, N. V., NARAYANSWAMY, P., THEERTHA PRASAD, D., MUKUNDA, G. K. AND SONDUR, S. N. (2001). Estimation of genetic diversity of commercial mango cultivars using RAPD markers. Journal of Horticultural Science & Biotechnology, 76, 529-533.
8. IYER, C. P. A. (1991). Recent advances in varietal improvement in mango. Acta Horticultural 291, 109-132.
9. KARIHALOO, J. L., DWIVEDI, Y. K., ARCUAK, S. AND GAIKWAD, A. B. (2003). Analysis of genetic diversity of Indian mango cultivars using RAPD markers. Journal of Horticultural Science & Biotechnology, 78, 285-289.
10. LOPEZ-VELANZUELA, J. A., MARTINEZ, O. AND PAREDES-LOPEZ, O. (1997). Geographic differentiation and embryo type identification in Mangifera indica L. cultivars using RAPD markers. HortScience, 32, 1105-1108.
11. MEATIS, I., AUBRY, C, HAMON, B., JALOUZOT, R. AND PELTIER, D. (2001). Assessing common bean genetic diversity using RFLP, DAMD-PCR, ISSR, RAPD and AFLP markers. Acta Horticultural 546, 456-461.
12. MILBOURNE, D., MEYER, R., BRADSHAW, J. E., BAIRD, E., BONAR, N., PROVAN, I, POWELL, W. AND WAUGH, R. (1997). Comparison of PCR-based marker systems for the analysis of genetic relationships in cultivated potato. Molecular Breeding, 3, 127-136.
13. MUKHERJEE, S. K. (1972). Origin of mango. Economic Botany, 26, 260-264.
14. PAGE, R. D. M. (2001).TreeVie\v (Win32) ver. 1.6.5. Distributed by Author, (http://taxonomy.zoology.gla.ac.uk/rod/rod.html).
15. PARSONS, B. I, NEWïURY, H. J., JACKSON, M.T. AND FORD-LLOYD, B. V. (1997). Contrasting genetic diversity relationships are revealed in rice (Oryza saliva L.) using different marker types. Molecular Breeding, 3, 115-125.
16. PAVLICEK, A., HRDA, S. AND FLEGR, J. (1999). FreeTree - Freeware program for construction of phylogenetic trees on the basis of distance data and bootstrapping/jackknife analysis of the tree robustness. Application in the RAPD analysis of the genus Frenkelia. Folia Biologica (Praha), 45, 97-99. (http://www.natur.cuni.cz/-flegr/freetree.htm).
17. POWELL, W., MORGANTE, M., ANDRE, G, HANAFEY, M., VOGEL, J., TINGEY, S. V. AND RAFALSKI, A. (1996). The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Molecular Breeding, 2, 225-238.
18. PREVOST, A. AND WILKINSON, M.J. (1999). A new system of comparing PCR primers applied to ISSR Fingerprinting of potato cultivars. Theoretical and Applied Genetics, 98, 107-112
19. RAM, S. AND RAJAN, S. (2003). Slants Report on Genetic Resource of Mango in the Asia-Pacific Region. IPGRI Office for South Asia, Pusa campus, New Delhi, India. 86-96.
20. RANADE, S. A. AND FAROOQUI, N. (2002). Assessment of profile variations amongst provenances of neem using single-primer- amplification reaction (SPAR) techniques. Molecular Biology Today, 3, 1-10. (http://www.molbio.net/v3/01/01. pdf).
21. RANADE, S. A., RANA.T. S., SRIVASTAVA, A. P. AND NAIR, K. N. (2006). Molecular differentiation in Murraya Koenig ex L. species in India inferred through ITS, RAPD and DAMD analysis. Current Science, 90, 1253-1258.
22. RAVISHANKAR, K. V., ANAND, L. AND DINESH, M. R. (2000). Assessment of genetic relatedness among mango cultivars of India using RAPD markers. Journal of Horticultural Science & Biotechnology, 7S, 198-201.
23. SALVI, M. J. AND GUNJATE, R.T. (1988). Mango breeding work in the Konkan region of Maharashtra State. Acta Horticulturae, 23, 100-102
24. SAXENA, S., CHANDRA, R., SRIVASTAVA, A. P., MISHRA, M., PATHAK, R. K. AND RANADE, S. A. (2005). Analysis of genetic diversity among papaya cultivars using Single Primer Amplification Reaction (SPAR) methods. Journal of Horticultural Science & Biotechnology, 80, 291-296.
25. SCHNELL, R. J. AND KNIGHT, R. J. (1993). Genetic relationships among Mangifera spp. based on RAPD markers. Acta Horticulturae, 341, 86-92.
26. SCHNELL, R. J., RUNNING, C. M. AND KNIGHT, R. J. (1995). Identification of cultivars and validation of genetic relationships in Mangifera indica L. using RAPD markers. Theoretical and Applied Genetics, 90, 269-274.
27. SHARMA, D. K., MAJUMDER, P. K. AND SINGH, R. N. (1980). Meet 'Mallika' and 'Amrapali'. Intensive Agriculture, 18, 15-16.
28. WELSH, J. AND MCCLELLAND, M. (1990). Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Research, 18, 7213-7218.
29. WILLIAMS, J. G. K., KUBELIK, A. R., LIVAK, K.J., RAFALSKI, J. A. AND TINGEY, S. V. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research, 18, 6531-6535.
30. WINBERG, B. G, SHORI, Z., DALLAS, J. F., MCINTYRE, C. L. AND GUSTAFSON, J. P. (1993). Characterization of minisatellite sequences from Oryza sativa. Genome, 36, 978-983.
31. ZHOU, Z., BEBELI, P. J., SOMERS, D. J. AND GUSTAFSON, J. P. (1997). Direct amplification of minisatellite region DNA with VNTR core sequences in the genus Oryza. Theoretical and Applied Genetics, 95, 276-283.