NMR assignment of the domain 513-651 from the SARS-CoV nonstructural protein nsp3

Biomolecular NMR Assignments

Volumn 1, Issue 2, 2007, Pages 191-194

  Chatterjee, Amarnath ^a   Johnson, Margaret A ^a   Serrano, Pedro ^a   Pedrini, Bill ^a   Wüthrich, Kurt ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

Nonstructural protein; Nsp3; Nsp3c; SARS CoV; SARS unique domain

Indexed keywords

SARS CORONAVIRUS;

NONSTRUCTURAL PROTEIN 3, SARS CORONOVIRUS; PROTON; RNA DIRECTED RNA POLYMERASE; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; METHODOLOGY; MOLECULAR WEIGHT; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROTEIN TERTIARY STRUCTURE;

AMINO ACID SEQUENCE; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR WEIGHT; PROTEIN STRUCTURE, TERTIARY; PROTONS; RNA REPLICASE; VIRAL NONSTRUCTURAL PROTEINS;

EID: 67249123526     PISSN: 18742718     EISSN: 1874270X     Source Type: Journal    
DOI: 10.1007/s12104-007-9052-x     Document Type: Article

References (19)

1. Bartlam M, Yang H, Rao Z (2005) Structural insights into SARS coronavirus proteins. Curr Opin Struct Biol 15:664-672 (Pubitemid 41668523)
2. Chen S, Luo H, Chen L, Chen J, Shen J, Zhu W, Chen K, Shen X, Jiang H (2006) An overall picture of SARS coronavirus (SARSCoV) genome-encoded major proteins: Structures, functions and drug development. Curr Pharm Des 12:4539-4553 (Pubitemid 44835143)
3. Herrmann T, Güntert P, Wüthrich K (2002a) Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J Mol Biol 319:209-227 (Pubitemid 34729497)
4. Herrmann T, Güntert P, Wüthrich K (2002b) Protein NMR structure determination with automated NOE-identification in NOESY spectra using the new software ATNOS. J Biomol NMR 24: 171-189 (Pubitemid 36113646)
5. 13Ca chemical shifts in protein structure determination. J Magn Reson 109:229-233
6. 15N NMR assignments and global folding pattern. Biochemistry 32:13818-13829 (Pubitemid 24018232)
7. 2O. J Magn Reson B 102:317-321
8. Pastore A, Saudek V (1990) The relationship between chemical shift and secondary structure in proteins. J Magn Reson 90:165-176
9. Peiris JS, Lai ST, Poon LL, Guan Y, Yam LY, Lim W, Nicholls J, Yee WK, Yan WW, Cheung MT, Cheng VC, Chan KH, Tsang DN, Yung RW, Ng TK, Yuen KY, SARS study group (2003) Coronavirus as a possible cause of severe acute respiratory syndrome. Lancet 361:1319-1325 (Pubitemid 36514862)
10. Prentice E, McAuliffe J, Lu X, Subbarao K, Denison MR (2004) Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins. J Virol 78:9977-9986 (Pubitemid 39187116)
11. 13C NMR. Magn Reson Chem 24: 835-852
12. Sattler M, Schleucher J, Griesinger C (1999) Heteronuclear multidimensional NMR experiments for the structure determination of proteins in solution employing pulsed field gradients. Prog NMR Spectrosc 34:93-158 (Pubitemid 129595216)
13. Schiller JJ, Kanjanahaluethai A, Baker SC (1998) Processing of the coronavirus MHV-JHM polymerase polyprotein: Identification of precursors and proteolytic products spanning 400 kilodaltons of ORF1A. Virology 242:288-302 (Pubitemid 28414734)
14. Snijder EJ, Bredenbeek PJ, Dobbe JC, Thiel V, Ziebuhr J, Poon LL, Guan Y, Rozanov M, Spaan WJ, Gorbalenya AE (2003) Unique and conserved features of genome and proteome of SARScoronavirus, an early split-off from the coronavirus group 2 lineage. J Mol Biol 331:991-1004 (Pubitemid 36969960)
15. 13C nuclear magnetic resonance chemical shifts. J Am Chem Soc 113:5490-5492
16. Thiel V, Ivanov KA, Putics A, Hertzig T, Schelle B, Bayer S, Weissbrich B, Snijder EJ, Rabenau H, Doerr HW, Gorbalenya AE, Ziebuhr J (2003) Mechanisms and enzymes involved in SARS coronavirus genome expression. J Gen Virol 84: 2305-2315 (Pubitemid 37063118)
17. 13C chemical-shift data. J Biomol NMR 4:171-180
18. 13C and l5N chemical shift referencing in biomolecular NMR. J Biomol NMR 6:135-140
19. Wüthrich K (1986) NMR of proteins and nucleic acids. Wiley, New York